cluster # 8943

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Anopheles gambiae
cluster # 8943 cluster # 8943 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8943#0 length = 2006 sequences # 12

consensus_8943#1 length = 307 sequences # 1

consensusID : consensus_8943#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2006
fasta sequence

                              [CCGAAAAGAAAGAGAAAGACGCCTCGCTTGGGC----TGAGCAAATCGCTAAGCTCATCTGTGGGGTAAACAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTACAATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCCGCATCTGCGTGCTGGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGGAAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACGAGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCAAGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAAACCTGTCTCGATAGCCGCGGTCGGCTGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGCGATCGTACCGGTGGACTGTGTGGTGGACGAGCAGGCGCAAGAGTTCCTGGAGTGCGATCTCATCCCGGAAACGGAGCTCGAGCCGGAGCTCGAACCACTGCCCGCCTCATCGCGCCGACGTACGGCGAAGGCGCGCAAAAGCGAACCCGCACCGAGGGGTTCGCGGACGAAGAAAGCGTACACCGCACCTGCGGAGGTAACGGAAATCAAGAAGGAGCTGGAGGACCCACAGGAGCAACTACAGGAGGAGCAGCAGCCGGAGGTGGAAGTGCTCGAAGAGGAGGAGTTAGAGTTTGCCGAGGAAAGCAACAGCGCAGAGCCGGAATGGAAACCACCGTCGTCCGCCGGAAGAGGCAAGAAAGCGAGAGGCGCACCGAAAGCGAAGCCGACCGACGAGAAGGTGCCTAAGGAAAGGAAGAAGCGCGAGCGTAAGCCAAAGGTCGAGCCGGGCGCGGAGGGAAAGCTCGAATCCAAAACGGAGCTGTACCGGTGCCAGCTGTGCTCGGGGCCAACGTACGAGACGCCCGGCGAGTTGACGGAGCATCTGAAGGCGGAACATCCTGCCCAGATACGGCCGTGCGACAAGTGCCCGAAGGTGTTCGTCAGCGAGCAGACGTTCCAGCACCACCAGTACTGTCACGCGACCGGCCGGTCCTTCTTCTGCGACTTCTGCGACAAGGGCTTCCAGACGGAGGGGCTGCTGACGAGCCACACCAAGTCGCACACGCGCGGTCCCAAGTTCCTGTGCTCGTACTGCGGCAAGGGGTTCACCACCAAGAGCAGCCTGCAGAAGCATATGATATTCCATACGGACAGCAAATCGTGGCCGTGCCGTCTGTGCCCCTGTCGGTTCAATACGAAAGCCTGCCTGCACGTGCATATGCGTACGCACACAAAAACGAAGATCTATACCTGCCCGATCTGTGGCTCGCAGTTTAAC-AAACACTACTCGATGGTGAAGCATCAGATCATTCACACAGGAGAACGCCCATTTGTCTGTGAGCTTTGTCCCATG-AGGTTTGTCTCGCCGTACCACGTGAAACGGCACATGCTAACGCACACCGGGGAAAAGCCCTACAAATGTACGTACTGTGAGCGCA-CTTCGCGCAAAGCAACGTGCTGGTGAAGCACATGAAAACGCACGTCGGCGACCATCCGTACCAGTGCGATCGGTGTGACGCGTCCTTCCGGCTGCTGAAGGACCT-GCGCAACCACTATCAGGAGCACTACGTGGAGAGCGAGAACGGTATCGGGCCGTCGCCGGTCGTGGACGATAAGGATATA-CGCTTTACCAGCAC-GGAAATCTTGAAGTTGCGATACCAAAAAGAGATGGGCCAGTACAGCCAAAAGTATGAGGGCAGCGGTGGTGACGATTGAGCAGGGCGCA-CA-GGTCTGTAGCGGTGTACACGGGTGTGTAACAATGTGGGGGAATTGGGGATATAGCATATACGCAGTCGCGGTACTAGTTTGCGCTTTACGAAGCTTACACTTACACTAACCCCATACTTTT-GGAGGAATAAATACGATACAAACTGAAAAAAAA]

[+] EMBL BM597477             [CCGAAAAGAAAGAGAAAGACGCCTCGCTTGGGCTGTGTGGGCAAATCGCTAAGCTCATCTGTGTGGTAAACAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTGCAATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCCGCATCTGCGTGCTAGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGGAAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACGAGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCAAGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAGACCTGTCTCGATAGCCGCGGCCGGCTGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGAGATCGTGCCGGTGGACTGTGTGGTGGACGAGCAGGCGCAAGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM588028             [                ccgCGCCTCGCTTGGGC    TGAGCAAATCGCTAAGCTCATCTGTGGGGTTAACAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTACAATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCCGCATCTGCGTGCTGGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGGAAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACGAGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCAAGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAAACCTGTCTCGATAGCCGCGGTCGGCTGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGCGATCGTACCGGTGGACTGTGTGGTGGACGAGCAGGCGCAAGAGTTCCTGGAGTGCGATCTCATCCCGGAAACGGAGCTCGAGCCGGAGCTCGAACCACTGCCCGCCTCATCGCGCCGACGTACGGCGAAGGCGCGCAAAAGCGAACCCGCACCGAGGGGTTCGCGGACGAAGAAAGCGTACACCGCACCTGCGGAGGTAACGGAAATCAAGAAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX621778             [                     CCTCGCTTGGGC    TGAGCAAATCGCTAAGCTCATCTGTGGGGTTAACAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTACAATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCCGCATCTGCGTGCTGGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGGAAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACGAGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCAAGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAAACCTGTCTCGATAGCCGCGGTCGGCTGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGCGATCGTACCGGTGGACTGTGTGGTGGACGAGCAGGCGCAAGAGTTCCTGGAGTGCGATCTCATCCCGGAAACGGAGCTCGAGCCGGAGCTCGAACCACTGCCCGCCTCATCGCGCCGACGTACGGCGAAGGCGCGCAAAAGCGAACCCGCACCGAGGGGTTCGCGGACGAAGAAAGCGTACACCGCACCTGCGGAGGTAACGGAAATCAAGAAGGAGCTGGAGGACCCACAGGAGCAACTACAGGAGGAGCAGCAGCCGGAGGTGGAAGTGCTCGAAGAGGAGGAGTTAGAGTTTGCCGAGGAAAGCAACAGCGCAGAGCCGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX623380             [                       TCGCTTGGGC    TGAGCAAATCGCTAAGCTCATCTGTGGGGTAAACAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTGCAATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCCGCATCTGCGTGCTGGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGGAAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACGAGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCAAGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAGACCTGTCTCGATAGCCGCGGTCGGCTGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGCGATCGTACCGGTGGACTGTGTGGTGGACGAGCAGGCGCAAGAGTTCCTGGAGTGCGATCTCATCCCGGAAACGGAGCTCGAGCCGGAGCTGGAACCACTGCCCGCCTCATCGCGCCGACGTACGGTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM603211             [                                                                   ccgCAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTACAATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCCGCATCTGCGTGCTGGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGGAAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACGAGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCAAGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAAACCTGTCTCGATAGCCGCGGTCGGCTGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGCGATCGTACCG  GCACTGTGTGGTGGACGAGCAGGCGCAAGAGTTCCTGGAGTGCGATCTCATCCCGGAAACGGAGCTCGAGCCGGAGCTCGAACCACTGCCCGCCTCATCGCGCCGACGTACGGCGAAGGCGCGCAAAAGCGAACCCGCACCGAGGGGTTCGCGGACGAAGAAAGCGTACACCGCACCTGCGGAGGTAACGGAAATCAAGAAGGAGCTGGAGGACCCACAGGAGCAACTACAGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM580198             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAACTACAGGAGGAGCAGCAGCCGGAGGTGGAAGTGCTCGAAGAGGAGGAGTTAGAGTTTGCCGAGGAAAGCAACAGCGCAGAGCCGGAATGGAAACCACCGTCGTCCGCCGGAAGAGGCAAGAAAGCGAGAGGCGCACCGAAAGCGAAGCCGACCGACGAGAAGGTGCCTAAGGAAAGGAAGAAGCGCGAGCGTAAGCCAAAGGTCGAGCCGGGCGCGGAGGGAAAGCTCGAATCCAAAACGGAGCTGTACCGGTGCCAGCTGTGCTCGGGGCCAACGTACGAGACGCCCGGCGAGTTGACGGAGCATCTGAAGGCGGAACATCCTGCCCAGATACGGCCGTGCGACAAGTGCCCGAAGGTGTTCGTCAGCGAGCAGACGTTCCAGCACCACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM649453             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgcgAAGGAAAGGAAGAAGCGCGAGCGTAAGCCAAAGGTCGAGCCGGGCGCGGAGGGAAAGCTCGAATCCAAAACGGAGCTGTACCGGTGCCAGCTGTGCTCGGGGCCAACGTACGAGACGCCCGGCGAGTTGACGGAGCATCTGAAGGCGGAACATCCTGCCCAGATACGGCCGTGCGACAAGTGCCCGAAGGTGTTCGTCAGCGAGCAGACGTTCCAGCACCACCAGTACTGTCACGCGACCGGCCGGTCCTTCTTCTGCGACTTCTGCGACAAGGGATTCCAGACGGAGGGGCTGCTGACGAGCCACACCAAGTCGCACACGCGCGGTCCCAAGTTCCTGTGCTCGTACTGCGGCAAGGGGTTCACCACCAAGAGCAGCCTGCAGAAGCATATGATATTCCATACGGACAGCAAATCGTGGCCGTGCCGTCTGTGCCCCTGTCGGTTCAATACGAAAGCCTGCCTGCACGTGCATATGCGTACGCACACAAAAACGAAGATCTATACCTGCCCGATCTGTGGCTCGCAGTTTAAC AAACACTACTCGATGGTGAAGCATCAGATCATTCACACAGGAGAACGCCCATTTGTCTGTGAGCTTTGTCCCATGAAGGTTTGTCTCGCCGTACCACGTGAAACGGCACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09I59             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGCTCGGGGCCAACGTACGAGACGCCCGGCGAGCTGACGGAGCATCTGAAGGCGGAACATCCGGCCCAGATACGGCCGTGCGACAAGTGCCCGAA GTGTTCGTCAGCGAGCAGACGTTCCAGCACCACCAGTACTGTCACGCGACCGGCCGGTCCTTCTTCTGCGACTTCTGCGACAAGGGCTTCCAGACGGAGGGGCTGCTGACGAGCCACACCAAGTCGCACACGCGCGGTCCCAAGTTCCTGTGCTCGTACTGCGGCAAGGGGTTCACCACCAAGAGCAGCCTGCAGAAGCATATGACATTCCATACGGACAGCAAATCGTGGCCGTGCCGTCTGTGCCCCTGTCGGTTCAATACGAAAGCCTGCCTGCACGTGCATATGCGTACGCACACAAAAACGAAGATCTATACCTGCCCGATCTGTGGCTCGCAGTTTAAC AAACACTACTCGATGGTGAAGCATCAGATCATTCACACAGGAGAACGCCCATTTGTCTGTGAGCTTTGTCCCATG AGGTTTGTCTCGCCGTACCACGTGAAACGGCACATGCTAACGCACACCGGGGAAAAGCCCTACAAATGTACGTACTGTGAGCGCA CTTCGCGCAAAGCAACGTGCTGGTGAAGCACATGAAAACGCACGTCGGCGACCATCCGTACCAGTGCGATCGGTGTGACGCGTCCTTCCGGCTGCTGAAGGACCT GCGCAACCACTATCAGGAGCACTACGTGGAGAGCGAGAACGGTATCGGGCCGTCGCCGGTCGTGGACGATAAGGATATA CGCTTTACCAGCAC GGAAATCTTGAAGTTGCGATACCAAAAAGAGATGGGCCAGTACAGCCAAAAGTATGAGGGCAGCGGTGGTGACGATTGAGCAGGGCGCA CAGGGTCTGTAGCGGTGTACACGGGTGTGTAAAAAT                                                                                                                          ]
[+] EMBL BM606290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCGCCAGTACTGTCACGCGACCGGCCGGTCCTTCTTCTGCGACTTCTGCGACAAGGGCTTCCAGACGGAGGGGCTGCTGACGAGCCACACCAAGTCGCACACGCGCGGTCCCAAGTTCCTGTGCTCGTACTGCGGCAAGGGGTTCACCACCAAGAGCAGCCTGCAGAAGCATATGACATTCCATACGGACAGCAAATCGTGGCCGTGCCGTCTGTGCCCCTGTCGGTTCAATACGAAAGCCTGCCTGCACGTGCATATGCGTACGCACACAAAAACGAAGATCTATACCTGCCCGATCTGTGGCTCGCAGTTTAAC AAACACTACTCGATGGTGAAGCATCAGATCATTCACACAGGAGAACGCCCATTTGTCTGTGAGCTTTGTCCCATG AGGTTTGTCTCGCCGTACCACGTGAAACGGCACATGCTAACGCACACCGGGGAAAAGCCGTACAAATGTACGTACTGTGAGCGCAGCTTCGCGCAAAGCAACGTGCTGGTGAAGCACATGAAAACGCACGTCGGCGACCATCCGTACCAGTGCGATCGGTGTGACGCGTCCTTCCGGCTGCTGAAGGACCT GCGCAACCACTACCAGGAGCACTACGTGGAGAGCGAAAACGGTATCGGGCCGTCGCCGGTCGTGGACGATAAGGATATACCCCTTTACCAGCACGGGAAATCTTGAAGCTGCGATACC                                                                                                                                                                                                                                 ]
[+] EMBL AGA281954            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGTTCCTGTGCTCGTACTGCGGCAAGGGGTTCACCACCAAGAGCAGCCTGCAGAAGCATATGATATTCCATACGGACAGCAAATCGTGGCCGTGCCGTCTGTCCCCCTGTCGGTTCAATACGAAAGCCTGCCTGCACGTGCATATGCGTACGCACACAAAAACGAAGATCTATACCTGCCCGATCTGTGGCTCGCAGTTTAAC AAACACTACTCGATGGTGAAGCATCAGATTATTCACACAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09I5A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACAAAAACGAAGATCTATACCTGCCCGATCTTTGGCTCGCAGTTTAACAAAAAACTACTCGATGGTGAAGCATCAGATCATTCACACAGGAGAACGCCCATTTTTCTTTGAGCTTTGTCCCATG AGGTTTTTCTCGCCGTACCACGTGAAACGGCACATG TTACGCACACCGGGGAAAAGCCCTACAAATGTACGTACTGTGAGCGCA CTTCGCGCAAAGCAACGTGCTGGTGAAGCACATGAAAACGCACGTCGGCGACCATCCGTACCAGTGCGATCGGTGTGACGCGTCCTTCCGGCTGCTGAAGGACCTCGCGCAACCACTATCAGGAG ACTACGTGGAGAGCGAGAACGGTATCGGGCCGTCGCCGGTCGTGGACGATAAGGATATA CGCTTTACCAGCAC GGAAATCTTGAAGTTGCGATACCAAAAAGAGATGGGCCAGTACAGCCAAAAGTATGAGGGCAGCGGTGGTGACGATTGAGCAGGGCGCAGCA GGTCTGTAGCGGTGTACACGGGTGTGTAACAATGTGGGGGAATTGGGGATATAGCATATACGCAGTCGCGGTACTAGTTTGCGCTTTACGAAGCTTACACTTACACTAACCCCATACTTTT GGAGGAATAAATACGATACAAAC          ]
[-] EMBL AGA280257            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACGGTATCGGCCCGTCGCCGGTCGTGGACGATAAGGATATA CGCTTTACCAGCAC GGAAATCTTGAAGCTGCGATACCAAAAAGAGATGGGCCAGTACAGCCAAAAGTATGAGGGCAGCGGTGGTGACGATTGAGCAGGGCGGAGCA GGTCTGTAGCAGTGTACACGGGTGTGTAACAATGTGGGGGAATTGGGGATATAGCATATACGCAGTCGCGGTACTAGTTTGCGGTTTACGAAGCTTACACTTACACTAACCACATACTTTTAGGA GAATAAATACGATACAACTTGAAAAAAAA]




>consensus_8943#0
CCGAAAAGAAAGAGAAAGACGCCTCGCTTGGGCTGAGCAAATCGCTAAGCTCATCTGTGG
GGTAAACAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTACA
ATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCC
GCATCTGCGTGCTGGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGG
AAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACG
AGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCA
AGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAAACCTGTCTCGATAGCCGCGGTCGGC
TGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGCGATCGTACCGGTGGACT
GTGTGGTGGACGAGCAGGCGCAAGAGTTCCTGGAGTGCGATCTCATCCCGGAAACGGAGC
TCGAGCCGGAGCTCGAACCACTGCCCGCCTCATCGCGCCGACGTACGGCGAAGGCGCGCA
AAAGCGAACCCGCACCGAGGGGTTCGCGGACGAAGAAAGCGTACACCGCACCTGCGGAGG
TAACGGAAATCAAGAAGGAGCTGGAGGACCCACAGGAGCAACTACAGGAGGAGCAGCAGC
CGGAGGTGGAAGTGCTCGAAGAGGAGGAGTTAGAGTTTGCCGAGGAAAGCAACAGCGCAG
AGCCGGAATGGAAACCACCGTCGTCCGCCGGAAGAGGCAAGAAAGCGAGAGGCGCACCGA
AAGCGAAGCCGACCGACGAGAAGGTGCCTAAGGAAAGGAAGAAGCGCGAGCGTAAGCCAA
AGGTCGAGCCGGGCGCGGAGGGAAAGCTCGAATCCAAAACGGAGCTGTACCGGTGCCAGC
TGTGCTCGGGGCCAACGTACGAGACGCCCGGCGAGTTGACGGAGCATCTGAAGGCGGAAC
ATCCTGCCCAGATACGGCCGTGCGACAAGTGCCCGAAGGTGTTCGTCAGCGAGCAGACGT
TCCAGCACCACCAGTACTGTCACGCGACCGGCCGGTCCTTCTTCTGCGACTTCTGCGACA
AGGGCTTCCAGACGGAGGGGCTGCTGACGAGCCACACCAAGTCGCACACGCGCGGTCCCA
AGTTCCTGTGCTCGTACTGCGGCAAGGGGTTCACCACCAAGAGCAGCCTGCAGAAGCATA
TGATATTCCATACGGACAGCAAATCGTGGCCGTGCCGTCTGTGCCCCTGTCGGTTCAATA
CGAAAGCCTGCCTGCACGTGCATATGCGTACGCACACAAAAACGAAGATCTATACCTGCC
CGATCTGTGGCTCGCAGTTTAACAAACACTACTCGATGGTGAAGCATCAGATCATTCACA
CAGGAGAACGCCCATTTGTCTGTGAGCTTTGTCCCATGAGGTTTGTCTCGCCGTACCACG
TGAAACGGCACATGCTAACGCACACCGGGGAAAAGCCCTACAAATGTACGTACTGTGAGC
GCACTTCGCGCAAAGCAACGTGCTGGTGAAGCACATGAAAACGCACGTCGGCGACCATCC
GTACCAGTGCGATCGGTGTGACGCGTCCTTCCGGCTGCTGAAGGACCTGCGCAACCACTA
TCAGGAGCACTACGTGGAGAGCGAGAACGGTATCGGGCCGTCGCCGGTCGTGGACGATAA
GGATATACGCTTTACCAGCACGGAAATCTTGAAGTTGCGATACCAAAAAGAGATGGGCCA
GTACAGCCAAAAGTATGAGGGCAGCGGTGGTGACGATTGAGCAGGGCGCACAGGTCTGTA
GCGGTGTACACGGGTGTGTAACAATGTGGGGGAATTGGGGATATAGCATATACGCAGTCG
CGGTACTAGTTTGCGCTTTACGAAGCTTACACTTACACTAACCCCATACTTTTGGAGGAA
TAAATACGATACAAACTGAAAAAAAA

consensusID : consensus_8943#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence

                              [AGCGCAGCCTCGCGCAAAGCAACGTACCCGTGAAGCACATGAAAACGCACGTCGGCGACCATCGTACCAGGGCGATCGGTGTGACGCGTCCTTCCGGCCGCTGAAGGACCTGCGCAACCACTATCAGGAGCACTACGTGGAGAGTGAGAACGGAATCGGGCCGTCCCCGGTCGTGGACGAAAAGGATATACGCTCGACCAGCACGGAAATCTAGAAGCTGCGATACCAAAAAGAGAAGGGCCAGTACAGCCAAAAGAATGAGGGCAGCGGTGGTGACGAAAGAGCAGGGCGGAGCAGGGCTGTAGCA]

[+] EMBL BX608338             [AGCGCAGCCTCGCGCAAAGCAACGTACCCGTGAAGCACATGAAAACGCACGTCGGCGACCATCGTACCAGGGCGATCGGTGTGACGCGTCCTTCCGGCCGCTGAAGGACCTGCGCAACCACTATCAGGAGCACTACGTGGAGAGTGAGAACGGAATCGGGCCGTCCCCGGTCGTGGACGAAAAGGATATACGCTCGACCAGCACGGAAATCTAGAAGCTGCGATACCAAAAAGAGAAGGGCCAGTACAGCCAAAAGAATGAGGGCAGCGGTGGTGACGAAAGAGCAGGGCGGAGCAGGGCTGTAGCA]




>consensus_8943#1
AGCGCAGCCTCGCGCAAAGCAACGTACCCGTGAAGCACATGAAAACGCACGTCGGCGACC
ATCGTACCAGGGCGATCGGTGTGACGCGTCCTTCCGGCCGCTGAAGGACCTGCGCAACCA
CTATCAGGAGCACTACGTGGAGAGTGAGAACGGAATCGGGCCGTCCCCGGTCGTGGACGA
AAAGGATATACGCTCGACCAGCACGGAAATCTAGAAGCTGCGATACCAAAAAGAGAAGGG
CCAGTACAGCCAAAAGAATGAGGGCAGCGGTGGTGACGAAAGAGCAGGGCGGAGCAGGGC
TGTAGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8943#0      CCGAAAAGAAAGAGAAAGACGCCTCGCTTGGGCTGAGCAAATCGCTAAGCTCATCTGTGG 60
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      GGTAAACAAACAAGCACTTTGCCCCATTTCGTTTATTCCCCGTTCGCAAGTGCAAGTACA 120
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      ATTGATCCGCGATGGACGTGGACGTGGTATGGCCATCGACCGACGCAACGGCGTGCTGCC 180
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      GCATCTGCGTGCTGGAGACGGAGGCGGCGGACGCGTGCCGCATGCACGAACCGCTGGAGG 240
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AAAATGGGTCCCAGAGCCTGCAGATCGTGCTGGAGAAGCTGTTCCCGGGCGTGTTCAACG 300
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AGGAGCAGGTGCAGCACGACTACACCATGAACTGGCCGATGGTGGTGTGCCGGGAGTGCA 360
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AGCGCAAGGTGCAGGAAGCGCACGAGCTGTACGAAACCTGTCTCGATAGCCGCGGTCGGC 420
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      TGCAGAAACGTTCCGCCAAGGAGGAAATGCACGCAGACGAAGCGATCGTACCGGTGGACT 480
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      GTGTGGTGGACGAGCAGGCGCAAGAGTTCCTGGAGTGCGATCTCATCCCGGAAACGGAGC 540
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      TCGAGCCGGAGCTCGAACCACTGCCCGCCTCATCGCGCCGACGTACGGCGAAGGCGCGCA 600
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AAAGCGAACCCGCACCGAGGGGTTCGCGGACGAAGAAAGCGTACACCGCACCTGCGGAGG 660
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      TAACGGAAATCAAGAAGGAGCTGGAGGACCCACAGGAGCAACTACAGGAGGAGCAGCAGC 720
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      CGGAGGTGGAAGTGCTCGAAGAGGAGGAGTTAGAGTTTGCCGAGGAAAGCAACAGCGCAG 780
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AGCCGGAATGGAAACCACCGTCGTCCGCCGGAAGAGGCAAGAAAGCGAGAGGCGCACCGA 840
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AAGCGAAGCCGACCGACGAGAAGGTGCCTAAGGAAAGGAAGAAGCGCGAGCGTAAGCCAA 900
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AGGTCGAGCCGGGCGCGGAGGGAAAGCTCGAATCCAAAACGGAGCTGTACCGGTGCCAGC 960
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      TGTGCTCGGGGCCAACGTACGAGACGCCCGGCGAGTTGACGGAGCATCTGAAGGCGGAAC 1020
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      ATCCTGCCCAGATACGGCCGTGCGACAAGTGCCCGAAGGTGTTCGTCAGCGAGCAGACGT 1080
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      TCCAGCACCACCAGTACTGTCACGCGACCGGCCGGTCCTTCTTCTGCGACTTCTGCGACA 1140
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AGGGCTTCCAGACGGAGGGGCTGCTGACGAGCCACACCAAGTCGCACACGCGCGGTCCCA 1200
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AGTTCCTGTGCTCGTACTGCGGCAAGGGGTTCACCACCAAGAGCAGCCTGCAGAAGCATA 1260
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      TGATATTCCATACGGACAGCAAATCGTGGCCGTGCCGTCTGTGCCCCTGTCGGTTCAATA 1320
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      CGAAAGCCTGCCTGCACGTGCATATGCGTACGCACACAAAAACGAAGATCTATACCTGCC 1380
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      CGATCTGTGGCTCGCAGTTTAACAAACACTACTCGATGGTGAAGCATCAGATCATTCACA 1440
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      CAGGAGAACGCCCATTTGTCTGTGAGCTTTGTCCCATGAGGTTTGTCTCGCCGTACCACG 1500
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      TGAAACGGCACATGCTAACGCACACCGGGGAAAAGCCCTACAAATGTACGTACTGTGAGC 1560
consensus_8943#1      ---------------------------------------------------------AGC 3
                                                                               ***

consensus_8943#0      GCA-CTTCGCGCAAAGCAACGTGCTGGTGAAGCACATGAAAACGCACGTCGGCGACCATC 1619
consensus_8943#1      GCAGCCTCGCGCAAAGCAACGTACCCGTGAAGCACATGAAAACGCACGTCGGCGACCATC 63
                      *** * **************** *  **********************************

consensus_8943#0      CGTACCAGTGCGATCGGTGTGACGCGTCCTTCCGGCTGCTGAAGGACCTGCGCAACCACT 1679
consensus_8943#1      -GTACCAGGGCGATCGGTGTGACGCGTCCTTCCGGCCGCTGAAGGACCTGCGCAACCACT 122
                       ******* *************************** ***********************

consensus_8943#0      ATCAGGAGCACTACGTGGAGAGCGAGAACGGTATCGGGCCGTCGCCGGTCGTGGACGATA 1739
consensus_8943#1      ATCAGGAGCACTACGTGGAGAGTGAGAACGGAATCGGGCCGTCCCCGGTCGTGGACGAAA 182
                      ********************** ******** *********** ************** *

consensus_8943#0      AGGATATACGCTTTACCAGCACGGAAATCTTGAAGTTGCGATACCAAAAAGAGATGGGCC 1799
consensus_8943#1      AGGATATACGCTCGACCAGCACGGAAATCTAGAAGCTGCGATACCAAAAAGAGAAGGGCC 242
                      ************  **************** **** ****************** *****

consensus_8943#0      AGTACAGCCAAAAGTATGAGGGCAGCGGTGGTGACGATTGAGCAGGGCGCA-CAGGTCTG 1858
consensus_8943#1      AGTACAGCCAAAAGAATGAGGGCAGCGGTGGTGACGAAAGAGCAGGGCGGAGCAGGGCTG 302
                      ************** **********************  ********** * **** ***

consensus_8943#0      TAGCGGTGTACACGGGTGTGTAACAATGTGGGGGAATTGGGGATATAGCATATACGCAGT 1918
consensus_8943#1      TAGCA------------------------------------------------------- 307
                      ****                                                        

consensus_8943#0      CGCGGTACTAGTTTGCGCTTTACGAAGCTTACACTTACACTAACCCCATACTTTTGGAGG 1978
consensus_8943#1      ------------------------------------------------------------
                                                                                  

consensus_8943#0      AATAAATACGATACAAACTGAAAAAAAA 2006
consensus_8943#1      ----------------------------