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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8957#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1908 fasta sequence
[GAATCGCCCGAGGTNTATCTAAGTTTTATCGGAAACACATCGTTCGTGAAAAAAAAAATGTGCTACATATTATAATGTTTTTAAATGATGTTTGTTTATTTCCATTTTCTTATTATCCCTGTTTATCTGCGCACCACCTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTTATTACGAAGTGGAACTCACACCTTCACAATGCACGATTGTTCGCTGTGAATGGTGCAGTTCCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCTTCCTATTTT-GTCTTTCTTGGTGGCACACTTAGTGACACACTTTACTAGAAGAAGGAGCGTAGGACAAGACTATCCAAACCATCAGCGAGCGTGTTTGCTAAATACTGAAACAAATCGTTAAAATACATTCCTTTAGAAAAGATCAATACTAATAGCAGTAGCGGCACGATTGTTTCAACAACACTCGATTTCGGCAACCAACACACGGCAACAACATCTTTCAGTGTGACCTCTTTCGCTTTGCTTTCACGCCAGCCATGTCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTATGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGGTGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCATTTGAAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGGTCGTCTTGAACGCGGAAAATCACGATNCCAGGGAGCGTTAAATGAAGTTAATCGTTTTGTAAAGGTGTGCATGCGTGTGCAGCCAACATCCATGTGAGTCTGTCGTAAAAGAACAAAATATATATAAGTGTGTCTTGAAGAAAACATGTTATGGATTTGATCTTTCTTTTTTTCATTTATTAAAATCGAAGTATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGTAGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAAAGGGTGTACATTCTCATAACCACTACCGAGCTTAAGCGGGATGTTATTAAGAAATAAACAAACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAATGAGAAAAAATGAAACAAAAAATCAACACAAAAAAAAAAACACAGAAAG--TATATATATACATAATTATAGGTATGAATAGATATTGTTGTAAACGACGAGTAAACGAAACTTAGTTAATGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACACACGTAACAGGAAGCTCATAAAACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTTAGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGAACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAACGCCAGATATCTAGTTGAACGGTGAAGGGGAGCAC-GGAATAACCCACGAAGAGAGGGTACCCTGCATGGCGCGGTTGCAATAGCGAAGATTCTTCTTCCTCTGTCCAATCATTGCGGTGACCGGTCTCCGCTGGATTCTAATATCCCGCTTCGTTTGAGCAGTGAATTATGTGCAAAAAACGTTCACAATAAATACACCACGGTATGGGATGTACGATCCC]
[+] EMBL AL930263 [GAATCGCCCGAGGTNTATCTAAGTTTTATCGGAAACACATCGTTCGTGAAAAAAAAAATGTGCTACATATTATAATGTTTTTAAATGATGTTTGTTTATTTCCATTTTCTTATTATCCCTGTTTATCTGCGCACCACCTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTTATTACGAAGTGGAACTCACACTTTCACAATGTACGATTGTTCGCTGTGAATGGTGCAGTTCCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGACGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCTTCCTATTTTAGTCTTTCTTGGTGGCACACTT ]
[+] EMBL BM631700 [ TATCCCTGGTTATCTGCGCACCACTTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTTATTACGAAGTAAAACTCACACCTTCACAATGCACGATTGTTCCCTGTGAATGGGGCAGTTCCGGAAATGTCGTAGGGGTCCCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAAATGTATACGTTGGCCAACGTT ]
[+] EMBL BX624549 [ CTCACACCTTCACAATGCACGATTGTTCGCTGTGAATGGTGCAGTTCCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCTTCCTATTTT TTCTTTTTTGGTGGTAGGAAGAGTGACACACTTTACTAGAAGAAGGAGCGTAGGACAAGACTATCCAAACCATCAGCGAGCGTGTTTGCTAAATACTGAAACAAATCGTTAAAATACATTCCTTTAGAAAAGATCAATACTAATAGCAGTAGCGGCACGATTGTTTCAACAACACTCGATTTCGGCAACCAACACACGGCAACAACATCTTTCAGTGTGACCTCTTTCGCTTTGCTTTCACGCCAGCCATGTCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTATGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGGTGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCATTTGAAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGGTCGTCTTGAACGCGGAAAATCACGATNC ]
[+] EMBL BM600053 [ ccgCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTATGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGGTGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCAGCTGAAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGATCGTGTTGAACGCGGAAAATCACGATCCCAGGGAGCGTTAAATGAAGTTAATCGTTTTGTAAAGGTGTGCATGCGTGTGCAGCCAACATCCATGTGAGTCTGTCGTAAAAGAACAAAATATATATAAGTGTGTCTTGAAGAAAACATGTTATGGATTTGATCTTTCTTTTTTTCATTTATTAAAATCGAAGTATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGTAGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAAAGGGTGTACATTCTCATAACCACTACCGAGCTTAA ]
[+] EMBL BM630343 [ ccgATTAAAATCGAAGTATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGTAGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAAAGGGTGTACATTCTCATAACCACTACCGAGCTTAAGCGGGATGTTATTAAGAAATAAACAAACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAATGAGAAAAAATGAAACAAAAAATCAACACAAAAAAAAAAACACAGAAAG TATATATATACATAATTATAGGTATGAATAGATATTGTTGTAAACGACGAGTAAACGAAACTTAGTTAATGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACACACGTAACAGGAAGCTCATAAAACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTTAGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGAACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAACGCCAGATATCTAGTTGAACGGTGAAAGGGAGCACGGGAATAACCCACGAAGAGAGGGTACCCTG ]
[+] EMBL BM631618 [ ccgGAGCTTAAGCGGGATGTTATTAAGAAATAAACAAACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAATGAGAAAAAATGAAACAAAAAATCAACAC AAAAAAAAACACAGAAAGTATATATATATACATAATTATAGGTATGAATAGATATTGTTGTAAACGACGAGTAAACGAAACTTAGTTAATGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACATACGTAACAGGAAGCTCATAAAACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTTAGGGGGTTGCATTAGAAGACAATGACAAAGCACAGCGTTAAATATTGTACGATAGAGCGAACATCAGCATGTATGGTATTCACATCAACAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAGCGCCAGATATCAAGTTGAACGGTGAAGGGGAACAC GGAATAACCCACGACGAGAGGGTACCCTGCATGGCGCGGTTGCAATAGCGAAGATTCTTCTTCCTCTGTCCAATCATTGCGGTGACCGGTCTCCGCTGGATTCTAATATCCCGCTTCGTTTGAGCAGTGAATTATGTGCAAAA ]
[+] EMBL BM621261 [ ccgCTTAGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGAACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAACGCCAGATATCTAGTTGAACGGTGAAGGGGAGCAC GGAATAACCCACGAAGAGAGGGTACCCTGCATGGCGCGGTTGCAATAGAGAAGATTCTTCTTCCTCTGTCCAACCATTGCGGTGACCGGTTCCCCCTGGATTCTAATATCCCGCTTCGTTTGAGCAGTGAATTATGTGCAAAAAACGTTCACAATAAATACACCACGGTATGGGATGTACGATCCC]
consensusID : consensus_8957#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1507 fasta sequence
[CGACCCACGCGTCCGCTTGGTGACAATTACGCACAAGGCTGTCATAGTGACCGCCTGAGCATCCTGTAAATTTGTCTGTTTCTTTTAATGCATGAGTTACTGTAAGGCAAAACTGCAGATTTTAACAGCCGCTTAGGTTTCGTAACCAAGCACCATGCTCCGGACGGTAATGAAAACATGTATATTTGTATGCGAGTGTGTTGGTTTCTATTCCGTTATGCCAGTGTATATTCCAACGGGGCATTATTTGGCATTATTCCCAGTTCAGGCTTTCGGTACTTAAACTTAAACTTAACTACGTAATGCGATATTTGATCCCGTACCTACCCATGTATGTATATATTTTGAGCTTAAAAATGATTGAAAAGAGAATATTCAAACAAACAAAAAGAAGACTTTCTTTCGGCCCCTTTGGCTTCTTACGCGATGCGATTGAACGCATATTGGAATGATGCTGACCAGACGTGATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGCTGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACGTTGGTTACTGTTCGAAATATTCCTATCTGTATATATCTATATTTTTTGTACTAGTTACCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAACGGCAACTTTGTCCCAAGACAGTATGTATGTATCCAGTCAGCACAACATAGTACATTATTGCTGGAATGTTTTGCAACACCAATGTAAGAGTTTAGTCCACAATTTCACGCCCATAAAATCGTTTGCGCGCTTTGAAATATTATTGAACATTATTAATCATTTGGCTTTGTTCATATCTATTTTGCTCATTAGCCTGAGGGCTTTTACAACAGAGCGCATCCATTACACCCTTTCTAAAAGCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACGGTTGTATCATTAAACATACAGGATCGAGGTGTCCGGTTTTTTTTTCTTTTCTTTCAATTTGTTAATTAATCCCTTTGAACAAAAAACAAACATAAAATATTGCCTTCCATTTAGAAATACGAAAAAAAAAATTAATAAAAAGAAGTAGAACTAAANAGATAGAAAAGAAACATAGTCGAAAAAATCGTTTTCAATTACTAGCTATTCTAAATAAAATGCTCTAAAACACTCACACACACACACAATCAAATAGCCAATTTTGGAGATTGATCATTTTGACATCAACATTTTTTTCGTTTTTCCTCATTACTTTAGGCAGAAAAAAGCGCGTGCTGCGAAATTTGTCATTTGTAATCTGNTTCAAAGAATTTTGACCCGCCCTTCTTGCTCGCTTGAAGAAATGATTAGTGAAAGTGGTGTGTTTTGCTTAGATTTGTTAATCTCACAGGACTCTTGGTAATGAAATTTAGCGATACGCCTATGTCCCCTCAATTGTTTAGAGCAGCAAGTGACTGAAAACCTT]
[+] EMBL BM630865 [CGACCCACGCGTCCGCTTGGTGACAATTACGCACAAGGCTGTCATAGTGACCGCCTGAGCATCCTGTAAATTTGTCTGTTTCTTTTAATGCATGAGTTACTGTAAGGCAAAACTGCAGATTTTAACAGCCGCTTAGGTTTCGTAACCAAGCACCATGCTCCGGACGGTAATGAAAACATGTATATTTGTATGCGAGTGTGTTGGTTTCTATTCCGTTATGCCAGTGTATATTCCAACGGGGCATTATTTGGCATTATTCCCAGTTCAGGCTTTCGGTACTTAAACTTAAACTTAACTACGTAATGCGATATTTGATCCCGTACCTACCCATGTATGTATATATTTTGAGCTTAAAAATGATTGAAAAGAGAATATTCAAACAAACAAAAAGAAGACTTTCTTTCGGCCCCTTTGGCTTCTTACGCGATGCGATTGAACGCATATTGGAATGATGCTGACCAGACGTGATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGCTGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACGTTGGTTACTGTTCGAAATATTCCTATCTGTATATATCTATATTTTTTGTACTAGTTACCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAACGGCAACTTTGTCCCAAGACAGT ]
[+] EMBL BX624107 [ ATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGCTGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACGTTGGTTACTGTTCGAAATATTCCTATCTGTATATATCTATATTTTTTGTACTAGTTACCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAACGGCAACTTTGTCCCAAGACAGTATGTATGTATCCAGTCAGCACAACATAGTACATTATTGCTGGAATGTTTTGCAACACCAATGTAAGAGTTTAGTCCACAATTTCACGCCCATAAAATCGTTTGCGCGCTTTGAAATATTATTGAACATTATTAATCATTTGGCTTTGTTCATATCTATTTTGCTCATTAGCCTGAGGGCTTTTACAACAGAGCGCATCCATTACACCCTTTCTAAAAGCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACGGTTGTATCATTAAACATACAGGATCGAGGTGTCCGGTTTTTTTTTCTTTTCTTTCAATTTGTTAATTAATCCC ]
[+] EMBL BX620878 [ TTACACCCTTTCTAAAAGCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACGGTTGTATCATTAAACATACAGGATCGAGGTGTCCGGTTTTTTTTTCTTTTCTTTCAATTTGTTAATTAATCCCTTTGAACAAAAAACAAACATAAAATATTGCCTTCCATTTAGAAATACGAAAAAAAAAATTAATAAAAAGAAGTAGAACTAAANAGATAGAAAAGAAACATAGTCGAAAAAATCGTTTTCAATTACTAGCTATTCTAAATAAAATGCTCTAAAACACTCACACACACACACAATCAAATAGCCAATTTTGGAGATTGATCATTTTGACATCAACATTTTTTTCGTTTTTCCTCATTACTTTAGGCAGAAAAAAGCGCGTGCTGCGAAATTTGTCATTTGTAATCTGNTTCAAAGAATTTTGACCCGCCCTTCTTGCTCGCTTGAAGAAATGATTAGTGAAAGTGGTGTGTTTTGCTTAGATTTGTTAATCTCACAGGACTCTTGGTAATGAAATTTAGCGATACGCCTATGTCCCCTCAATTGTTTAGAGCAGCAAGTGACTGAAAACCTT]
consensusID : consensus_8957#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 615 fasta sequence
[CCGCAGACGGCCCCGTTCGTACCAGCGAAACCGAAAAAACACCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGG]
[+] EMBL BM627500 [CCGCAGACGGCCCCGTTCGTACCAGCGAAACCGAAAAAACACCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGG]
consensusID : consensus_8957#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 590 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTGATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCCCCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTTTGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCACAAACAACCCCCACGTGAAGTCAACGAGATGGTACGTGTTGTGCTCTCGTCGTCCTGTGTCCGTCCTGTATGTGTTTTATCATCACCACCACCACCAACACCATCAGCTTTACCGTGCCCCATCCCTGCCCCAACCGAGCGTACATATGTGTATGTGTGCGTGTGTGTGTTCGTACGAGACAAAACCAACACACACACACAGGGTAGAAGTACGTTTTGTGTAAGTGTGAGGGTAAGCAACAACAACAACAACAACAATCGACATGTAGTTGTGATCCAACGAAGTCATTAAGACCTGGGAGTAAGCATTAGGTTTGAGTGAGAGAGAGAGACGTGTAC]
[+] EMBL BM622436 [CCGCCCACGCGTCCGCCCACGCGTCCGGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTGATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCCCCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTTTGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCACAAACAACCCCCACGTGAAGTCAACGAGATGGTACGTGTTGTGCTCTCGTCGTCCTGTGTCCGTCCTGTATGTGTTTTATCATCACCACCACCACCAACACCATCAGCTTTACCGTGCCCCATCCCTGCCCCAACCGAGCGTACATATGTGTATGTGTGCGTGTGTGTGTTCGTACGAGACAAAACCAACACACACACACAGGGTAGAAGTACGTTTTGTGTAAGTGTGAGGGTAAGCAACAACAACAACAACAACAATCGACATGTAGTTGTGATCCAACGAAGTCATTAAGACCTGGGAGTAAGCATTAGGTTTGAGTGAGAGAGAGAGACGTGTAC]
consensusID : consensus_8957#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 114 fasta sequence
[GCAAGGGAACAGCGCCAAGGACACGATCAAGGGGCTGCCCTGCCAGACGCGCGCAGGCGAAACGCCGGTCGGGGCATTCGACGGGCCGCCGAACAACAACCACACCCAGAAGCC]
[+] EMBL BX610249 [GCAAGGGAACAGCGCCAAGGACACGATCAAGGGGCTGCCCTGCCAGACGCGCGCAGGCGAAACGCCGGTCGGGGCATTCGACGGGCCGCCGAACAACAACCACACCCAGAAGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 GAATCGCCCGAGGTNTATCTAAGTTTTATCGGAAACACATCGTTCGTGAAAAAAAAAATG 60
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ------------------------------------------------------------
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TGCTACATATTATAATGTTTTTAAATGATGTTTGTTTATTTCCATTTTCTTATTATCCCT 120
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ------------------------------------------------------------
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 GTTTATCTGCGCACCACCTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTT 180
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ------------------------------------------------------------
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 ATTACGAAGTGGAACTCACACCTTCACAATGCACGATTGTTCGCTGTGAATGGTGCAGTT 240
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ------------------------------------------------------------
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 CCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATG 300
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ------------------------------------------------------------
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTT 360
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ------------------------------------------------------------
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCT 420
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ---------------------------------CGACCCACGCGTCCGCTTGGTGACAAT 27
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TCCTATTTTGTCTTTCTTGGTGGCACACTTAGTGACACACTTTACTAGAAGAAGGAGCGT 480
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 TACGCACAAGGCTGTCATAGTGACCGCCTGAGCATCCTGTAAATTTGTCTGTTTCTTTTA 87
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 AGGACAAGACTATCCAAACCATCAGCGAGCGTGTTTGCTAAATACTGAAACAAATCGTTA 540
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 ATGCATGAGTTACTGTAAGGCAAAACTGCAGATTTTAACAGCCGCTTAGGTTTCGTAACC 147
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 AAATACATTCCTTTAGAAAAGATCAATACTAATAGCAGTAGCGGCACGATTGTTTCAACA 600
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 AAGCACCATGCTCCGGACGGTAATGAAAACATGTATATTTGTATGCGAGTGTGTTGGTTT 207
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 ACACTCGATTTCGGCAACCAACACACGGCAACAACATCTTTCAGTGTGACCTCTTTCGCT 660
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 CTATTCCGTTATGCCAGTGTATATTCCAACGGGGCATTATTTGGCATTATTCCCAGTTCA 267
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TTGCTTTCACGCCAGCCATGTCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTA 720
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 GGCTTTCGGTACTTAAACTTAAACTTAACTACGTAATGCGATATTTGATCCCGTACCTAC 327
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGG 780
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 CCATGTATGTATATATTTTGAGCTTAAAAATGATTGAAAAGAGAATATTCAAACAAACAA 387
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCATTTG 840
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 AAAGAAGACTTTCTTTCGGCCCCTTTGGCTTCTTACGCGATGCGATTGAACGCATATTGG 447
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 AAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGGTCGTCTTGAAC 900
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 AATGATGCTGACCAGACGTGATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGC 507
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 GCGGAAAATCACGATNCCAGGGAGCGTTAAATGAAGTTAATCGTTTTGTAAAGGTGTGCA 960
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 TGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACG 567
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TGCGTGTGCAGCCAACATCCATGTGAGTCTGTCGTAAAAGAACAAAATATATATAAGTGT 1020
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 TTGGTTACTGTTCGAAATATTCCTATCTGTA---TATATCTATATTTTTTGTACTAGTTA 624
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 GTCTTGAAGAAAACATGTTATGGATTTGATCTTTCTTTTTTTCATTTATTAAAATCGAAG 1080
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 CCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAA 684
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGT 1140
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 CGGCAACTTTGTCCCAAGACAGTATGTATGTATCCAGTCAGCACAACATAGTACATTATT 744
consensus_8957#2 ------------------------------------------------------------
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 AGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAA 1200
consensus_8957#3 ------------------------------------------------------------
consensus_8957#1 GCTGGAATGTTTTGCAACACCAATGTAAGAGTTTAGTCCACAATTTCACGCCCATAAAAT 804
consensus_8957#2 -----CCGCAGACGGCCCCGTTCGTACCAGCGAAACCGAAAAAACACCATAAATCCGGGC 55
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 AGGGTGTACATTCTCATAACCACTACCGAGCTTAAGCGGGATGTTATTAAGAAATAAACA 1260
consensus_8957#3 ----------------------------------------------CCGCCCACGCGTCC 14
consensus_8957#1 CGTTTGCGCGCTTTGAAATATTATTGAACATTATTAATCATTTGGCTTTGTTCATATCTA 864
consensus_8957#2 GAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCG 115
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 AACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAAT 1320
consensus_8957#3 GCCCACGCGTCCGGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTG 74
consensus_8957#1 TTTTGCTCATTAGCCTGAGGGCTTTTACAACAGAGCGCATCCATTACACCCTTTCTAAAA 924
consensus_8957#2 GCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCC 175
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 GAGAAAAAATGAAACAAAAAATCAACACAAAAAAAAAAACACAGAAAGTATATATATACA 1380
consensus_8957#3 ATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCC 134
consensus_8957#1 GCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACG 984
consensus_8957#2 GGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAG 235
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TAATTATAGGTATGAATAGATATTGTTGTAAA---CGACGAGTAAACGAAACTTAGTTAA 1437
consensus_8957#3 CCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTT 194
consensus_8957#1 GTTGTATCATTAAACATACAGGATCGAGGTGTC-CGGTTTTTTTTTCTTTTCTTTCAATT 1043
consensus_8957#2 CAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTG 295
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 TGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACACACGTAACAGGAAGCTCATA 1497
consensus_8957#3 TGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCACAA 254
consensus_8957#1 TGTTAATTAATCCCTTTGAACAAAAAACAAACATAAAATATTGCCTTCCATTTAGAAATA 1103
consensus_8957#2 G-AGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGT-ACGG 353
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 A-AACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTT 1556
consensus_8957#3 ACAACCCCCACGTGAAGTCAACGAGATGGTACGTGTTGTGCTCTCGTCGTCCTGTGTCCG 314
consensus_8957#1 CGAAAAAAAAAATTAATAAAAAGAAGTAGAACTAAANAGATAGAAAAGAAACATAGTCGA 1163
consensus_8957#2 AGGGTCTGGTGCGTGGGCAGCGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACC 413
consensus_8957#4 ------------------------------------------------------------
consensus_8957#0 AGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGA 1616
consensus_8957#3 TCCTGTATGTGTTTTATCATCACCACCACCACCAACACCATCAGCTTTACCGTGCCCCAT 374
consensus_8957#1 AAAAATCGTTTTCAATTACTAGCTATTCTAAATAAAATGCTCTAAAACACTCACACACAC 1223
consensus_8957#2 TGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGA 473
consensus_8957#4 ----------------------------------------------------GCAAGGGA 8
consensus_8957#0 ACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGA 1676
consensus_8957#3 CCCTGCCCCAACCGAGCGTACATATGTGTATGTGTGCGTGTGTGTGT-TCGTACGAGACA 433
consensus_8957#1 ACACAATCAAATAGCCAATTTTGGAGATTGATCATTTTGACATCAACATTTTTTTCGTTT 1283
consensus_8957#2 TCCTGGTGACGGGCAT---CA--AGGTGGTGGACCTGCTG-GCCCCGTACGCGAAGGGCG 527
consensus_8957#4 ACAGCGCCAAGGACAC---GATCAAGGGGCTGCCCTGCCA-GACGCGCGCAGGCGAAACG 64
consensus_8957#0 ACGACCAGCAACGCCA---GAT-ATCTAGTTGAACGGTGAAGGGGAGCACGGAATAACCC 1732
consensus_8957#3 AAACCAACACACACACACAGGGTAGAAGTACGTTTTGTGTAAGTGTGAGGGTAAGCAACA 493
consensus_8957#1 TTCCTCATTACTTTAGGCAGAA-AAAAGCGCGTGCTGCGAAATTTGTCATTTGTAATCTG 1342
* * *
consensus_8957#2 GCAAGATCGG-CCTGTTCGGTGGTGC-CGGCGTTGGCAA-GACCG--TACTCATCATGGA 582
consensus_8957#4 CC--GGTCGG-GGCATTCGACGG-GC-CGCCG--AACAACAACCA--CACCCA----GAA 111
consensus_8957#0 ACGAAGAGAG-GGTACCCTGCATGGCGCGGTTGCAATAGCGAAGA--TTCTTCTTCCTCT 1789
consensus_8957#3 ACAACAACAACAACAATCGACATGTAGTTGTGA-TCCAACGAAGT--CATTAAGACCTGG 550
consensus_8957#1 NTTCAAAGAATTTTGACCCGCCCTTCTTGCTCGCTTGAAGAAATGATTAGTGAAAGTGGT 1402
* * *
consensus_8957#2 GCTGATCAACAACGTCGCCAAGGCGCACGGTGG--------------------------- 615
consensus_8957#4 GCC--------------------------------------------------------- 114
consensus_8957#0 GTCCAATCATTGCGGTGACCGGTCTCCGCTGGATTCTAATATCCCGCTTCGTTTGAGCAG 1849
consensus_8957#3 GAGTAAGCATTAGGTTTGAGTGAGAGAGAGAGACGTGTAC-------------------- 590
consensus_8957#1 GTGTTTTGCTTAGATTTGTTAATCTCACAGGACTCTTGGTAATGAAATTTAGCGATACGC 1462
*
consensus_8957#2 -----------------------------------------------------------
consensus_8957#4 -----------------------------------------------------------
consensus_8957#0 TGAATTATGTGCAAAAAACGTTCACAATAAATACACCACGGTATGGGATGTACGATCCC 1908
consensus_8957#3 -----------------------------------------------------------
consensus_8957#1 CTATGTCCCCTCAATTGTTTAGAGCAGCAAGTGACTGAAAACCTT-------------- 1507
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||