cluster # 8965

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Anopheles gambiae
cluster # 8965 cluster # 8965 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8965#0 length = 1047 sequences # 9
consensus_8965#1 length = 688 sequences # 1

consensus_8965#2 length = 664 sequences # 1
consensus_8965#3 length = 449 sequences # 2

consensusID : consensus_8965#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1047
fasta sequence

                              [CCCGAGCGGTTGGAAGGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGG-TTTTTTTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTTTTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAAAAAAACACGCTAAA-CTGCACACAGAAGACAACACAC----ACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGCGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTT-TTTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGACGGTGGTAGTAGTAGTAGTAGTGATGCGGTGTATAGTGGCCAGGTCCCCAGGTAGGGGACAACAAAGCGGAGGGGGCATTCGGCAAAAAAGGGGATGAACACCACCCCACACGTCGTTAAGGTGGGAATGGCCAGAACCGTCAGCCAAAAGATGCATTTATACTCTT-TCCTCCACCA--CCCCCCCCCCCCCGCCCTTCTTTCAATACCCCCGTTGCAGAGGGCACACTTCAGGTATCTC--CCCCCCCCCTCCCTCCAACCCCCTGTGGCGCCTGGTTCATATACCTAACGAGATACGGCAATTCCTGCATTGGACTTTAAAAAAAACAAACAAACAAACAAATAAATCTCTCCCCCTTGTCGTAATGACGCCGATGGGGAAAAAAAA]

[+] EMBL CNS08YDA             [CCCGAGCGGTTGGAAGGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGG TTTTTTTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCG TTTTTTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAAAAAAACACGCTAAA CTGCACACAGAAGACAACACAC    ACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGCGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTT TTTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGACGGTGGTAGTAGTAGTAGTTGTGTTGCGGTGTTTAGTGGCCAGG                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08N28             [           GGAAGG AGAG AGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGG TTTTTTTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTTTTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAAAAAAACACGCTAAACCTGCACACAGAAGACAACACAC    ACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGCGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTTCTTTCCAAGTACGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX628345             [                                     GGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGGTTTTTTTTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTTTTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACG AAAAAAAACACGCTAAA CTGCACACAGAAGACAACACAC    ACACATTATTACATTAACCATTTCTTCTAANACAGTCCCCTCCCCGCGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTT TTTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGA                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX614744             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGCTAAA CTGCACACAGAAGACAACACACACAAACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGCGCCTTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTT TTTCGAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGACGGTGGTAGTAGTAGTAGTAGTGATGCGGTGTATAGTGGCCAGGTCCCCAGGTAGGGGACAACAAAGCGGAGGGGGCATTCGGCAAAAAAGGGGATGAACACCACCCCACACGTCGTTAAGGTGGGAATGGCCAGAACCGTCAGCCAAAAGATGCATTTATACTCTT TCCTCCACCA  CCCCCCCCCCCCCGCCCTTCTTTCAATACCCCCGTTGCAGAGGGCACACTTCAGGTATCTCCTCCCCCCCCCTCCCTCCAACCCCCTGTGGCGCCTGGTTCATATACCTAACGAGATACGGCAATTCCTGCATTGGACTTTAAAAAAAACAAACAAACAAACAAATAAATCTCTCCCCCTTGTCGTAATGACGCCGAT            ]
[+] EMBL BX607966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTT TTTCGAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGACGGTGGTAGTAGTAGTAGTAGTGATGCGGTGTATAGTGGCCAGGTCCCCAGGTAGGGGACAACAAAGCGGAGGGGGCATTCGGCAAAAAAGGGGATGAACACCACCCCACACGTCGTTAAGGTTGGAATGGCCAGAACCGTCAGCCAAAAGATGCATTTATACTCTT TCCTCCACCACCCCCCCCCCCCCCCGCCCTTC                                                                                                                                                                                              ]
[+] EMBL BX618519             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAGGTCCCCAGGTAGGGGACAACAAAGCGGAGGGGGCATGCGGCAAAAAAGGGGAAGAACACCACCCCACACGTCGTTAAGGGGGGAATGGCCAGAACC                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08YDB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gattTTTATTTTTTTCTCCCCCCCCC  CCCCCCCCCCCCCGCCCTTTTTTCAATACCCCCGTTGCAGAGGGCACACTTCAGGTATCTC  CCCCCCCCCTCCCTCCAACCCCCTGGGGCGCCTGGTTCATATACCTAACGAGATACGGCAATTCCTGCATTGGACTTAAAAAAAAACAAACAAACAAACAAATAAATCTCTCCCCCTTGTCGTAATGACGCCGATGGGGA       ]
[-] EMBL CNS08N29             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       caCCCCCA   CCCCCCCGCCCCGCCCTTTTTTCAATACCCCCGTTGCAGAGGGCACACTTCAGGTATCTC  CCCCCCCCCTCCCTCCAACCCCCTGTGGCGCCTGGTTCATATACCTAACGAGATACGGCAATTCCTGCATTGGAC TTAAAAAAAACAAACAAACAAACAAATAAATCTCTCCCCCTTGTCGTAATGAC                  ]
[-] EMBL AGA283611            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCCTCCAACCCCCTGTGGCGCCTGGTTCATATACCTAACGAGATACGGCAATTCCTGCATTGGACTTTAAAAAAAACAAACAAACAAACAAATAAATCTCTCCCCCTTGTCGTAATGACGCCGATATGGAAAAAAAA]




>consensus_8965#0
CCCGAGCGGTTGGAAGGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTA
GCTCGTAAGGACCGCCGGATAATAGGATAGGTTTTTTTTTTTTCGTTTTACGACTGCCTT
TGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGT
TTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGT
GCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGA
CCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTT
TTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACC
CGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAAAAAAACACGCTAAAC
TGCACACAGAAGACAACACACACACATTATTACATTAACCATTTCTTCTAAGACAGTCCC
CTCCCCGCGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGC
GTTTTTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATT
GACGGTGGTAGTAGTAGTAGTAGTGATGCGGTGTATAGTGGCCAGGTCCCCAGGTAGGGG
ACAACAAAGCGGAGGGGGCATTCGGCAAAAAAGGGGATGAACACCACCCCACACGTCGTT
AAGGTGGGAATGGCCAGAACCGTCAGCCAAAAGATGCATTTATACTCTTTCCTCCACCAC
CCCCCCCCCCCCGCCCTTCTTTCAATACCCCCGTTGCAGAGGGCACACTTCAGGTATCTC
CCCCCCCCCTCCCTCCAACCCCCTGTGGCGCCTGGTTCATATACCTAACGAGATACGGCA
ATTCCTGCATTGGACTTTAAAAAAAACAAACAAACAAACAAATAAATCTCTCCCCCTTGT
CGTAATGACGCCGATGGGGAAAAAAAA

consensusID : consensus_8965#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence

                              [CCGGCCTGCTAAAACCCGCTGCAAGAAGACACACCTTTTCGTGGTGGGGAGCGGTTGGAAGGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGGTTTTTTTTTTTCGTTTTTCGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCTCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTGCGTTCGTTTTTTTAGGCGTTTTGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATCACGCTAAACTGCACACAGAAGACAACACACACAAACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGCGCCTTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTTTTTCGAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGA]

[+] EMBL BX625616             [CCGGCCTGCTAAAACCCGCTGCAAGAAGACACACCTTTTCGTGGTGGGGAGCGGTTGGAAGGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGGTTTTTTTTTTTCGTTTTTCGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCTCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTGCGTTCGTTTTTTTAGGCGTTTTGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATCACGCTAAACTGCACACAGAAGACAACACACACAAACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGCGCCTTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGTTTTTCGAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGA]




>consensus_8965#1
CCGGCCTGCTAAAACCCGCTGCAAGAAGACACACCTTTTCGTGGTGGGGAGCGGTTGGAA
GGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGC
CGGATAATAGGATAGGTTTTTTTTTTTCGTTTTTCGACTGCCTTTGTTTTAAGTTCACGA
TTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCT
CGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCTC
TTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTTA
CTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTGCGTTCGTTTTTTTAGGCGTTTTGTAA
AAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGC
AACAAACGAAATCACGCTAAACTGCACACAGAAGACAACACACACAAACACATTATTACA
TTAACCATTTCTTCTAAGACAGTCCCCTCCCCGCGCCTTGAATTACAAAGGGCAAATGAA
ATGACATTGGCAGGCAATGCGGTAGCGTTTTTCGAAGTACGGAAGCGCCTACGAGTTGGA
GAGAGTTTTGTCAGATGTACTTGATTGA

consensusID : consensus_8965#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence

                              [AGAATCGCCCGAGGTTAAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGGTTTTNTATTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTACCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTATTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTANAATTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAACAAAAACACGCTAAACTGCACACAGAAGACAACACACACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGAGGCAATGCGGTAGCGTATTTNTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGACGGTTGGTAGTAGTAGTAGT]

[+] EMBL AL692754             [AGAATCGCCCGAGGTTAAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAATAGGATAGGTTTTNTATTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTACCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTATTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTANAATTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAACAAAAACACGCTAAACTGCACACAGAAGACAACACACACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGAGGCAATGCGGTAGCGTATTTNTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGACGGTTGGTAGTAGTAGTAGT]




>consensus_8965#2
AGAATCGCCCGAGGTTAAGACAGTTTATAATATTATTAGCTCGTAAGGACCGCCGGATAA
TAGGATAGGTTTTNTATTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTC
GTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGAC
CCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTACCCTTA
ACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTATTTACTTTT
GCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTANAATTTTAGGCGTTTAGTAAA
AGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCA
ACAAACGAAATGAAACAAAACGAAAACAAAAACACGCTAAACTGCACACAGAAGACAACA
CACACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCCCGGCCCTGAATTA
CAAAGGGCAAATGAAATGACATTGGAGGCAATGCGGTAGCGTATTTNTCCAAGTACGGAA
GCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGACGGTTGGTAGTAGTAG
TAGT

consensusID : consensus_8965#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 449
fasta sequence

                              [ACATGTGGCCTTTTTTTTTTTTTTTTTTTAATAGGATAGGTTTTTTTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTTTTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAAAAAAACACGCTAAACTGCACACAGAAGACAACACA]

[-] EMBL CNS090BF             [ACATGTGGCCTTTTTTTTTTTTTTTTTTTAATAGGATAGGTTTTTTTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTTTTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAAAAAAACACGCTAAACTGCACACAGAAGACAACACA]
[+] EMBL CNS090BG             [                                                                                                                                                           ACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTTTACGTTCGTTTTTTTTTTAGGCGTTTAGTAAAAAAGCGGGTAATTGTGGAGCATGAg                                                                                                ]




>consensus_8965#3
ACATGTGGCCTTTTTTTTTTTTTTTTTTTAATAGGATAGGTTTTTTTTTTTTCGTTTTAC
GACTGCCTTTGTTTTAAGTTCACGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCT
GTGTGTAGTTTTAATTTCATTTTCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCC
CGTTTCTGTGCTATTCCTCCTTCCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGT
GTAAATGGACCTTCTTTTTTTTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACG
TTCGTTTTTTTTTTAGGCGTTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAG
ATGTAAACCCGGACATGATGAATGTGCAACAAACGAAATGAAACAAAACGAAAAAAAAAC
ACGCTAAACTGCACACAGAAGACAACACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8965#2      ------------------------------------------------------------
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      ---------------------------------------------CCCGAGCGGTTGGAA 15
consensus_8965#1      CCGGCCTGCTAAAACCCGCTGCAAGAAGACACACCTTTTCGTGGTGGGGAGCGGTTGGAA 60
                                                                                  

consensus_8965#2      -------AGAATCGCCCGAGGTTAAGACAGTTTATAATATTATTAGCTCGTAAGGACCGC 53
consensus_8965#3      -----------------------------ACATGTGGCCTTTTTTTTTTTTT-------T 24
consensus_8965#0      GGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGC 75
consensus_8965#1      GGCAGAGCAGAGGGACGAGACAGGAGACAGTTTATAATATTATTAGCTCGTAAGGACCGC 120
                                                      * *    ** **   *  *         

consensus_8965#2      CGGATAATAGGATAGGTTTTNTATTTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCA 113
consensus_8965#3      TTTTTAATAGGATAGGTTTTTT--TTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCA 82
consensus_8965#0      CGGATAATAGGATAGGTTTTTT--TTTTTTCGTTTTACGACTGCCTTTGTTTTAAGTTCA 133
consensus_8965#1      CGGATAATAGGATAGGTTTTTT---TTTTTCGTTTTTCGACTGCCTTTGTTTTAAGTTCA 177
                          **************** *   *********** ***********************

consensus_8965#2      CGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTT 173
consensus_8965#3      CGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTT 142
consensus_8965#0      CGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTT 193
consensus_8965#1      CGATTTCGTTCGTTTTTCCTTCTTTCTTTCTTTTTGCTGTGTGTAGTTTTAATTTCATTT 237
                      ************************************************************

consensus_8965#2      TCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTT 233
consensus_8965#3      TCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTT 202
consensus_8965#0      TCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTT 253
consensus_8965#1      TCTCGACCCTACGACACGCTCTTTTGCTACCCCCATCCCGTTTCTGTGCTATTCCTCCTT 297
                      ************************************************************

consensus_8965#2      ACCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTATT 293
consensus_8965#3      -CCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTT 261
consensus_8965#0      -CCCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTT 312
consensus_8965#1      -CTCTTAACGCCGTTAGTTATAGTGTAAGGCTTAATTGTGTAAATGGACCTTCTTTTTTT 356
                       * ****************************************************** **

consensus_8965#2      T--ACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTANAATTTTAGGCG 351
consensus_8965#3      TT-ACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTTT-TTTTAGGCG 319
consensus_8965#0      TT-ACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTACGTTCGTTTTTT-TTTTAGGCG 370
consensus_8965#1      TTTACTTTTGCTTGTGGGGCGCGCGCCGTTGGAGTGTGCGTTCGTTT----TTTTAGGCG 412
                      *  ********************************** *********    *********

consensus_8965#2      TTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGAT 411
consensus_8965#3      TTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGAT 379
consensus_8965#0      TTTAGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGAT 430
consensus_8965#1      TTTTGTAAAAGAGCGGGTAATTGTGGAGCATGATGCGCGAGATGTAAACCCGGACATGAT 472
                      *** ********************************************************

consensus_8965#2      GAATGTGCAACAAACGAAATGAAACAAAACGAAAACAAAAACACGCTAAACTGCACACAG 471
consensus_8965#3      GAATGTGCAACAAACGAAATGAAACAAAACGAAAA-AAAAACACGCTAAACTGCACACAG 438
consensus_8965#0      GAATGTGCAACAAACGAAATGAAACAAAACGAAAA-AAAAACACGCTAAACTGCACACAG 489
consensus_8965#1      GAATGTGCAACAAACGAAAT---------------------CACGCTAAACTGCACACAG 511
                      ********************                     *******************

consensus_8965#2      AAGACAACACACACA----CATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCC 527
consensus_8965#3      AAGACAACACA------------------------------------------------- 449
consensus_8965#0      AAGACAACACACACA----CATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCC 545
consensus_8965#1      AAGACAACACACACAAACACATTATTACATTAACCATTTCTTCTAAGACAGTCCCCTCCC 571
                      ***********                                                 

consensus_8965#2      CG-GCCCTGAATTACAAAGGGCAAATGAAATGACATTGG-AGGCAATGCGGTAGCGTATT 585
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      CGCGCCCTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGT--T 603
consensus_8965#1      CGCGCCTTGAATTACAAAGGGCAAATGAAATGACATTGGCAGGCAATGCGGTAGCGT--T 629
                                                                                  

consensus_8965#2      TNTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGAC 645
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      TTTCCAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGAC 663
consensus_8965#1      TTTCGAAGTACGGAAGCGCCTACGAGTTGGAGAGAGTTTTGTCAGATGTACTTGATTGA- 688
                                                                                  

consensus_8965#2      GGTTGGTAGTAGTAGTAGT----------------------------------------- 664
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      GGT-GGTAGTAGTAGTAGTAGTGATGCGGTGTATAGTGGCCAGGTCCCCAGGTAGGGGAC 722
consensus_8965#1      ------------------------------------------------------------
                                                                                  

consensus_8965#2      ------------------------------------------------------------
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      AACAAAGCGGAGGGGGCATTCGGCAAAAAAGGGGATGAACACCACCCCACACGTCGTTAA 782
consensus_8965#1      ------------------------------------------------------------
                                                                                  

consensus_8965#2      ------------------------------------------------------------
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      GGTGGGAATGGCCAGAACCGTCAGCCAAAAGATGCATTTATACTCTTTCCTCCACCACCC 842
consensus_8965#1      ------------------------------------------------------------
                                                                                  

consensus_8965#2      ------------------------------------------------------------
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      CCCCCCCCCCGCCCTTCTTTCAATACCCCCGTTGCAGAGGGCACACTTCAGGTATCTCCC 902
consensus_8965#1      ------------------------------------------------------------
                                                                                  

consensus_8965#2      ------------------------------------------------------------
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      CCCCCCCTCCCTCCAACCCCCTGTGGCGCCTGGTTCATATACCTAACGAGATACGGCAAT 962
consensus_8965#1      ------------------------------------------------------------
                                                                                  

consensus_8965#2      ------------------------------------------------------------
consensus_8965#3      ------------------------------------------------------------
consensus_8965#0      TCCTGCATTGGACTTTAAAAAAAACAAACAAACAAACAAATAAATCTCTCCCCCTTGTCG 1022
consensus_8965#1      ------------------------------------------------------------
                                                                                  

consensus_8965#2      -------------------------
consensus_8965#3      -------------------------
consensus_8965#0      TAATGACGCCGATGGGGAAAAAAAA 1047
consensus_8965#1      -------------------------