cluster # 8982

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Anopheles gambiae
cluster # 8982 cluster # 8982 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8982#0 length = 1851 sequences # 10
consensus_8982#1 length = 779 sequences # 1

consensus_8982#2 length = 668 sequences # 1
consensus_8982#3 length = 269 sequences # 1

consensusID : consensus_8982#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1851
fasta sequence

                              [CCGCTGCAAACCAAACTCTGCAAAAAGAAAAAATAACAACACCACCACAACCAACACATGTACACACTGTACGATCATCACATCACGATTTGCATCCGCATCAGCCAAAGTTGTTTCCCCCTTCTCCCCACAACAACTTTCCCGTCTGTGTACAATAATCAAAAGCACGCATGAGATACGTTGACCAATGGCCAAATTCCACCCCACTCCACATGTTCGGCGTTTCGGGGTGATTTTGATAGTACCGGCGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGAGAATCTCTGCGCCCGCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAGTTGAAACCCCTTAGTCCGAACGGTGCATTCCACACAGCGAGCCATCAAGACCATCTCATTAGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAAGTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCGGTTTTATTACGAATTTTATCGGTGCCCTCAAAAGGTGAATAACATCAAGCGAAAATAA---AACCTTCTGGTCGTGATTTCGGAAACATATATGACGCAATCGTGAGCCTAAATGTTAAGAGTTAATTGCATAGAGATACAGAATAATGAGACATTGTTTAGAACACGTATTTCACCGCACATCTGTCTGTGGCTGGGGTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAACGATTCAAACAAATTACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAAT-AAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGG-AGTCTCTGAAGCATGAAGGGCGCATGAACAGCGAACGGTAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAATGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGCATCGTATGCATCTCCCCTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTTAGCGTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACG-CCCCGGGGCAACATAATATTATGTGGACAGGCCGGTGATAAAGCATTTTACGTGGTGTGAAACAGTAAAACAAAACAAAATAGAAACTCTGGCAGACGATTAACGGGCTACAACAAATAAAAACACGCAACAGTATCGCGAGCCGTTAGTAAACGACGTTAGTATGTAGACAGAGAGAGAGAGACAGTGAGTGGAAGAAAGAGAGATAGAGGAAGCGAAAAAAAACGACGAAAGATTTTTGTAGTGTGTGTGTGCAAACGTTAGGTAAGGTTATATTATTCAAAATAAAATTTATGGTATGAAAAATAGT]

[+] EMBL BM639805             [CCGCTGCAAACCAAACTCTGCAAAAAGAAAAAATAACAACACCACCACAACCAACACATGTACACACTGTACGATCATCACATCACGATTTGCATCCGCATCAGCCAAAGTTGTTTCCCCCTTCTCCCCACAACAACTTTCCCGTCTGTGTACAATAATCAAAAGCACGCATGAGATACGTTGACCAATGGCCAAATTCCACCCCACTCCACATGTTCGGCGTTTCGGGGTGATTTTGATAGTACCGGCGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGAGAATCTCTGCGCCCGCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAGTTGAAACCCCTTAGTCCGAACGGTGCATTCCACACAGCGAGCCATCAAGACCATCTCATTAGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAAGTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCGGTTTTATTACGAATTTTATCGGTGCCCTCAAAAGGTGAATAACATCAAGCGAAAATAATTGAACCTTCTGGTCGTGATTTCGGAAACATATATGACGCAATCGTGAGCCTAAATGTTAAGAGTTAATTGCATAGAGATACAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX612792             [                                                                                                                                                                                                                                                                                              GAATCTCTGCGCCCGCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAGTTGAAACCCCTTAGTCCGAACGGTGCATTCCACACAGCGAGCCATCAAGACCATCTCATTAGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAAGTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCGGTTTTATTACGAATTTTATCGGTGTCCTCAAAAGGTGAATAACATCAAGCGAAAATAA   AACCTTCTGGTCGTGATTTCGGAAACACATATGACGCAATTGTAAGCCTAAATGTTAAGAGTTAATTGCATAGAGATACAGAATAATGAGACATTGTTTAGAACACGTATTTCACCGCACATCTGTCTGTGGCTGGGGTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAACGATTCAAACAAATTACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AGA281675            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGTTTAGAACACGTATTTCACCGCACATCTGTCTGTGGCTGGGATGGAA  CT TAATGCCAGCAGAC AAAAAATCAAAACGATTCAAACAAATTACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCGATTCGGTACCACTCAAATGCTCGGAATCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAAT AAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGG AGTCTCTGAAGCATGAAGGGAGCATGAACAGCGAACGGTAGTAGTGTAAAGCCACCGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTT      GTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAATGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX629237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAAT GAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGGCAGTCTCTGAAGCATGAAGGGCGCATGAACAGCGAACGGAAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAACGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGCCTCGTATGTATCTCCCTTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTTAGCGTGTTCTTTATCCCAGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACGCCCCCGGGGCAACATAATATT                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX629128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAAT GAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGGCAGTCTCTGAAGCATGAAGGGCGCATGAACAGCGAACGGAAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAACGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGCCTCGTATGTATCTCCCTTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTTAGCGTGTTCTTTATCCCAGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAGAG                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX615533             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAATAAAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGG AGTCTCTGAAGCATGAAGGGCGCATGAACAGCGAACGGTAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAATGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGCATCGTATGCATCTCCCCTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTTAGCGTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAc                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM639528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAATAAAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGG AGTCTCTGAAGCATGAAGGGCGCATGAACAGCGAACGGTAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAATGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGCATCGTATGCATCTCCCCTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTTAGCGTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACG                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM598274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgCGCTCGAGGGCTACTCACGCATAGTGCGGAGTTATTACATGCCGTCAGATCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGCATCGTATGCATCTCCCCTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTTAGCGTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACG CCCCGGGGCAACATAATATTATGTGGACAGGCCGGTGATAAAGCATTTTACGTGGTGTGAAACAGTAAAACAAAACAAAATAGAAACTCTGGCAGACGATTAACGGGCTACAACAAATAAAAACACGCAACAGTATCGCGAGCCGTTAGTAAACGACGTTAGTATGTAGACAGAGAGAGAGAGACAGTGAGTGGAAGAAAGAGAGATAGAGGAAGCGAAAAAAAACGACGAAAGATTTTTGTAGTGTGTGTGTGCAAACGTTAGGTAAGGTTATATTATTCAAAATAAAATTTATGGTATGAAAAATAGT]
[+] EMBL BM579837             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgatAGTGCGGAGTTATTACATGCCGTCAGATCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTGCGCATCGTATGCATCTCCCCTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTTAGCGTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACG CCCCGGGGCAACATAATATTATGTGGACAGGCCGGTGATAAAGCATTTTACGTGGTGTGAAACAGTAAAACAAAACAAAATAGAAACTCTGGCAGACGATTAACGGGCTACAACAAATAAAAACACGCAACAGTATCGCGAGCCGTTAGTAAACGACGTTAGTATGTAGACAGAGAGAGAGAGACAGTGAGTGGAAGAAAGAGAGATAGAGGAAGCGAAAAAAAACGACGAAAGATTTTTGTAGTGTGTGTGTGCAAACGTTAGGTAAGGTTATATTATTCAAAATAAAATTTATGGTATGAAAAATAGT]
[-] EMBL AGA283247            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTACATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACG CCCCGGGGCAACATAATATTATGTGGACAGGCCGGTGATAAAGCATTTTACGTGGTGTGAAACAGTAAAACAAAACAAAATAGAAACTCTGGCAGACGATTAACGGGCTACAACAAATCAAAACACGCAACAGTA                                                                                                                                                                               ]




>consensus_8982#0
CCGCTGCAAACCAAACTCTGCAAAAAGAAAAAATAACAACACCACCACAACCAACACATG
TACACACTGTACGATCATCACATCACGATTTGCATCCGCATCAGCCAAAGTTGTTTCCCC
CTTCTCCCCACAACAACTTTCCCGTCTGTGTACAATAATCAAAAGCACGCATGAGATACG
TTGACCAATGGCCAAATTCCACCCCACTCCACATGTTCGGCGTTTCGGGGTGATTTTGAT
AGTACCGGCGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGAGAATCTCTGCGCCC
GCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAG
TTGAAACCCCTTAGTCCGAACGGTGCATTCCACACAGCGAGCCATCAAGACCATCTCATT
AGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAA
GTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCGGTTTTATTA
CGAATTTTATCGGTGCCCTCAAAAGGTGAATAACATCAAGCGAAAATAAAACCTTCTGGT
CGTGATTTCGGAAACATATATGACGCAATCGTGAGCCTAAATGTTAAGAGTTAATTGCAT
AGAGATACAGAATAATGAGACATTGTTTAGAACACGTATTTCACCGCACATCTGTCTGTG
GCTGGGGTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAACGATTCAAACAAATTA
CAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCG
ATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGG
CCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCG
TATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACA
ACGAAAACATTTGGCAGAAACCGCAGGCACAAAATAAAAAACACAACCACACAAAAACGA
TTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGGAGTCTCTGAAGCATGAAGGGCG
CATGAACAGCGAACGGTAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCA
CGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAAT
AGTGAATGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGGAG
TTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTGTG
CGCATCGTATGCATCTCCCCTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCATTT
AGCGTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTATTA
CATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACGCCCCGGGGCAACATAATAT
TATGTGGACAGGCCGGTGATAAAGCATTTTACGTGGTGTGAAACAGTAAAACAAAACAAA
ATAGAAACTCTGGCAGACGATTAACGGGCTACAACAAATAAAAACACGCAACAGTATCGC
GAGCCGTTAGTAAACGACGTTAGTATGTAGACAGAGAGAGAGAGACAGTGAGTGGAAGAA
AGAGAGATAGAGGAAGCGAAAAAAAACGACGAAAGATTTTTGTAGTGTGTGTGTGCAAAC
GTTAGGTAAGGTTATATTATTCAAAATAAAATTTATGGTATGAAAAATAGT

consensusID : consensus_8982#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 779
fasta sequence

                              [GTATATGAACCCGCAAGTNCAGCGTCTGCAGCAGTATAGNTGGCTTACCCNAGCTGATATGGATTCGGATTAGCGAACAANCNATCATTCTGCGTACCACATCGTGCTNACCTGNACCGCTGGCTTTATGATANTTATATATATTACNTACACNCACCTAGCTATACCAACACATGTTACACACTGTACGATCATCACATCACGATTTGCATGCCGCATCAGCCATAAGTTGTTTCCCCGTCGTCCCCACGTNCANACTTTCCCATGTGTGTACAATNATCNTGAAGCACGGCATGAGATACGTTGACGCAATGGCCAATATTCCACCGCCANCTCCACATGTTCGGCGTTTCCTGGGGTGATTTTGATAGTACCGGCGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGTGAATCTCTGCGCCCGCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAGTTGAAACCCCTTAGTCCGAACGGTGCATTGCCACACAGCGAGCCATCAAGACCATGCTCAGTAGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAAGTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCAGGTTTTATTACGAATTTTATCGGTGTCCTCAAAAGGTGNATAACATCAAGCGAAAATAAAACCTTATGGTCGTGATTTCGGNNAACACAAAANANANATAACCCGTGGGCCGATTCT]

[-] EMBL AL697595             [GTATATGAACCCGCAAGTNCAGCGTCTGCAGCAGTATAGNTGGCTTACCCNAGCTGATATGGATTCGGATTAGCGAACAANCNATCATTCTGCGTACCACATCGTGCTNACCTGNACCGCTGGCTTTATGATANTTATATATATTACNTACACNCACCTAGCTATACCAACACATGTTACACACTGTACGATCATCACATCACGATTTGCATGCCGCATCAGCCATAAGTTGTTTCCCCGTCGTCCCCACGTNCANACTTTCCCATGTGTGTACAATNATCNTGAAGCACGGCATGAGATACGTTGACGCAATGGCCAATATTCCACCGCCANCTCCACATGTTCGGCGTTTCCTGGGGTGATTTTGATAGTACCGGCGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGTGAATCTCTGCGCCCGCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAGTTGAAACCCCTTAGTCCGAACGGTGCATTGCCACACAGCGAGCCATCAAGACCATGCTCAGTAGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAAGTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCAGGTTTTATTACGAATTTTATCGGTGTCCTCAAAAGGTGNATAACATCAAGCGAAAATAAAACCTTATGGTCGTGATTTCGGNNAACACAAAANANANATAACCCGTGGGCCGATTCT]




>consensus_8982#1
GTATATGAACCCGCAAGTNCAGCGTCTGCAGCAGTATAGNTGGCTTACCCNAGCTGATAT
GGATTCGGATTAGCGAACAANCNATCATTCTGCGTACCACATCGTGCTNACCTGNACCGC
TGGCTTTATGATANTTATATATATTACNTACACNCACCTAGCTATACCAACACATGTTAC
ACACTGTACGATCATCACATCACGATTTGCATGCCGCATCAGCCATAAGTTGTTTCCCCG
TCGTCCCCACGTNCANACTTTCCCATGTGTGTACAATNATCNTGAAGCACGGCATGAGAT
ACGTTGACGCAATGGCCAATATTCCACCGCCANCTCCACATGTTCGGCGTTTCCTGGGGT
GATTTTGATAGTACCGGCGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGTGAATC
TCTGCGCCCGCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTT
TCGCGCGAGTTGAAACCCCTTAGTCCGAACGGTGCATTGCCACACAGCGAGCCATCAAGA
CCATGCTCAGTAGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTG
GTTTAGCGTAAGTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGC
CAGGTTTTATTACGAATTTTATCGGTGTCCTCAAAAGGTGNATAACATCAAGCGAAAATA
AAACCTTATGGTCGTGATTTCGGNNAACACAAAANANANATAACCCGTGGGCCGATTCT

consensusID : consensus_8982#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 668
fasta sequence

                              [ATACAGAATAATGAGATAAAGTGTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAACGATTCAAACAAATTACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAATGAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGGCAGTCTCTGAAGCATGAAGGGCGCATGAACAGCGAACGGAAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAACGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTTCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTG]

[+] EMBL BX610002             [ATACAGAATAATGAGATAAAGTGTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAACGATTCAAACAAATTACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCGCATGGTTCAATCGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTTATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTTCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAATGAAAAACACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGGCAGTCTCTGAAGCATGAAGGGCGCATGAACAGCGAACGGAAGTAGTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGAATAGTGAACGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTTCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTG]




>consensus_8982#2
ATACAGAATAATGAGATAAAGTGTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAA
CGATTCAAACAAATTACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTT
CCGCATGGTTCAATCGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCACTCTTTGTT
ATCAGTGCTCTGCTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCA
TTAGAAGAAGCAATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGGCTTTTGTT
CGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACAAAATGAAAAACAC
AACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAAACCGGCAGTGGCAGTCT
CTGAAGCATGAAGGGCGCATGAACAGCGAACGGAAGTAGTGTAAAGCCAACGGTCGAGCC
CGAGCGTAACCAAGCCACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCG
TTGTTCAGTTTCGGAATAGTGAACGAATTTTCGGACATTAAAATACCGCTCGAGGGCTAC
TCACGCAGAGTTCGGAGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTAT
ATTCACTG

consensusID : consensus_8982#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 269
fasta sequence

                              [GAGGTTTACGTGATGGTGTGTGGGGAAGGGGGCCTTTTTGGTTTCCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACCAAAAAATAAAAAAAAAACAACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAACACCGGCAGTGGAGTCTTCCCTTNGGAAAAAAAGGGCCCAATTGAAGGGGGAGCATGAACAGCGAACGGTAGTAGTGTAAAGCCACCGGTCGAGCCCGAGCGTAACCAAGACC]

[+] EMBL AL694877             [GAGGTTTACGTGATGGTGTGTGGGGAAGGGGGCCTTTTTGGTTTCCGAGCACCAAAATACAACGAAAACATTTGGCAGAAACCGCAGGCACCAAAAAATAAAAAAAAAACAACAACCACACAAAAACGATTTCAGATTGAGAATCGAAAATCTCAACACCGGCAGTGGAGTCTTCCCTTNGGAAAAAAAGGGCCCAATTGAAGGGGGAGCATGAACAGCGAACGGTAGTAGTGTAAAGCCACCGGTCGAGCCCGAGCGTAACCAAGACC]




>consensus_8982#3
GAGGTTTACGTGATGGTGTGTGGGGAAGGGGGCCTTTTTGGTTTCCGAGCACCAAAATAC
AACGAAAACATTTGGCAGAAACCGCAGGCACCAAAAAATAAAAAAAAAACAACAACCACA
CAAAAACGATTTCAGATTGAGAATCGAAAATCTCAACACCGGCAGTGGAGTCTTCCCTTN
GGAAAAAAAGGGCCCAATTGAAGGGGGAGCATGAACAGCGAACGGTAGTAGTGTAAAGCC
ACCGGTCGAGCCCGAGCGTAACCAAGACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      CCGCTGCAAACCAAACTCTGCAAAAAGAAAAAATAACAACACCACCACAACCAACACATG 60
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      TACACACTGTACGATCATCACATCACGATTTGCATCCGCATCAGCCAAAGTTGTTTCCCC 120
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      CTTCTCCCCACAACAACTTTCCCGTCTGTGTACAATAATCAAAAGCACGCATGAGATACG 180
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      TTGACCAATGGCCAAATTCCACCCCACTCCACATGTTCGGCGTTTCGGGGTGATTTTGAT 240
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      AGTACCGGCGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGAGAATCTCTGCGCCC 300
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      GCGTGCCGTCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAG 360
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      TTGAAACCCCTTAGTCCGAACGGTGCATTCCACACAGCGAGCCATCAAGACCATCTCATT 420
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      AGCCAAACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAA 480
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      GTCACTTTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCGGTTTTATTA 540
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      CGAATTTTATCGGTGCCCTCAAAAGGTGAATAACATCAAGCGAAAATAAAACCTTCTGGT 600
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      CGTGATTTCGGAAACATATATGACGCAATCGTGAGCCTAAATGTTAAGAGTTAATTGCAT 660
consensus_8982#1      -------------------------------------GTATATGAACCCGCAAGTNCAGC 23
                                                                                  

consensus_8982#2      ---------------------------------------------ATACAGAATAATGAG 15
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      AGAGATACAGAATAATGAGACATTGTTTAGAACACGTATTTCACCGCACATCTGTCTGTG 720
consensus_8982#1      GTCTGCAGCAGTATAGNTGGCTTACCCNAGCTGATATGGATTCGGATTAGCGAACAANCN 83
                                                                                  

consensus_8982#2      ATAAAGTGTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAACGATTCAAACAAATT 75
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      GCTGGG-GTGAAACCCTGTAATGCCAGCAGACAAAAAAATCAAAACGATTCAAACAAATT 779
consensus_8982#1      ATCATTCTGCGTACCACATCGTGCTNACCTGNACCGCTGGCTTTATGATANTTATATATA 143
                                                                                  

consensus_8982#2      ACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCG-CATGGTTCAAT 134
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      ACAAACCCAACAAATTAGAGATGAATGAATGCATCCCAATCTTTTCCG-CATGGTTCAAT 838
consensus_8982#1      TTACNTACACNCACCTAGCTATACCAACACATGTTACACACTGTACGATCATCACATCAC 203
                                                                                  

consensus_8982#2      CGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCAC--TCTTTGTTATCAGTGCTCTG 192
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      CGATTCGGCACCACCCAAATGCTCGAAACCTTTCCCAC--TCTTTGTTATCAGTGCTCTG 896
consensus_8982#1      GATTTGCATGCCGCATCAGCCATAAGTTGTTTCCCCGTCGTCCCCACGTNCANACTTTCC 263
                                                                                  

consensus_8982#2      CTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCA 252
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      CTGGCCGGTGGAGCCATTGCGTTATCGGTTCACTTCCGTGCTGAAGCATTAGAAGAAGCA 956
consensus_8982#1      CATGTGTGTACAATNATCNTGAAGCACGGCATGAGATACGTTGACGCAATGGCCAATATT 323
                                                                                  

consensus_8982#2      ATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGG-----CTTTTG---TTCGAG 304
consensus_8982#3      -------GAGGTTTA----CGTGATGGTGTGTGGGGAAGGGGGCCTTTTTGGTTTCCGAG 49
consensus_8982#0      ATCGTATGTGGTTGGAGGGCGTGATGGTGTGTGGGGAGGG-----CTTTTG---TTCGAG 1008
consensus_8982#1      CCACCGCCANCTCCACATGTTCGGCGTTTCCTGGGGTGA------TTTTGATAGTACCGG 377
                                 *          *  * *   *****          ***     * *  *

consensus_8982#2      CACCAAAATACAACGAAAACATTTGG------CAGA---AACCGCAGGCAC---AAAATG 352
consensus_8982#3      CACCAAAATACAACGAAAACATTTGG------CAGA---AACCGCAGGCACCAAAAAATA 100
consensus_8982#0      CACCAAAATACAACGAAAACATTTGG------CAGA---AACCGCAGGCAC---AAAATA 1056
consensus_8982#1      CGCGCTGTCAGAAGGCGCGCATTCGGGTGGCACGGAGTGAATCTCTGCGCCCGCGTGCCG 437
                      * *      * ** *    **** **      * **   ** * * *   *         

consensus_8982#2      AAAAACA-----CAACCA--CACAAAAACGATTTCAGATT-------GAGAATCGAAAAT 398
consensus_8982#3      AAAAAAAAACAACAACCA--CACAAAAACGATTTCAGATT-------GAGAATCGAAAAT 151
consensus_8982#0      AAAAACA-----CAACCA--CACAAAAACGATTTCAGATT-------GAGAATCGAAAAT 1102
consensus_8982#1      TCAGTCGTTTCGCAACCGATCGCAATGATCGTTACGGTGCTTTTCGCGCGAGTTGAAACC 497
                        *         *****   * ***  *   ** * *          * ** * ****  

consensus_8982#2      CTCAA-ACCGGCAGTGGCAGTCTC------TGAAGCATGAAGGGC--------------- 436
consensus_8982#3      CTCAACACCGGCAGTGGAGTCTTCCCT---TNGGAAAAAAAGGGCCCAATTGAAGGGGGA 208
consensus_8982#0      CTCAA-ACCGGCAGTGGAGTCTC-------TGAAGCATGAAGGGC--------------- 1139
consensus_8982#1      CCTTAGTCCGAACGGTGCATTGCCACACAGCGAGCCATCAAGACCATGCTCAGTAGCCAA 557
                      *   *  ***   *  *                   *  ***  *               

consensus_8982#2      GCATGAACAGCGAACGGAAGTA-GTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGC 495
consensus_8982#3      GCATGAACAGCGAACGGTAGTA-GTGTAAAGCCACCGGTCGAGCCCGAGCGTAACCAAGA 267
consensus_8982#0      GCATGAACAGCGAACGGTAGTA-GTGTAAAGCCAACGGTCGAGCCCGAGCGTAACCAAGC 1198
consensus_8982#1      ACTCTACTAATGGACAGTGTTTTATCTCATAACGACGGTTTTGGTTTAGCGTAAGTCACT 617
                       *   *  *  * ** *   *   * * *   *  ****   *    *******   *  

consensus_8982#2      CACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGA 555
consensus_8982#3      CC---------------------------------------------------------- 269
consensus_8982#0      CACGTGCATGCGAGCCCTGAGTTGTTTGTGTGCGTGTGTGGTTCGTTGTTCAGTTTCGGA 1258
consensus_8982#1      TTGGACCACACTGGGGTCTGCTGTGCTGGGAGCGGGTTATTGCCAGGTTTTATTACGAAT 677
                                                                                  

consensus_8982#2      ATAGTGAACGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTTCGG 615
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      ATAGTGAATGAATTTTCGGACATTAAAATACCGCTCGAGGGCTACTCACGCAGAGTGCGG 1318
consensus_8982#1      TTTATCGGTGTCCTCAAAAGGTGNATAACATCAAGCGAAAATAAAAC-CTTATGGTCGTG 736
                                                                                  

consensus_8982#2      AGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTG------- 668
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      AGTTATTACATGCCGTCAGCTCGAGCAGTGGCTGGTTGGCTTTATATTCACTGTGTTCTG 1378
consensus_8982#1      ATTTCGGNNAACACAAAANANANATAACCCGTGGGCCGATTCT----------------- 779
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      TGCGCATCGTATGCATCTCCCCTATCCCATCCCTTTCAGCTGTGTAGATTGTGTGTCCAT 1438
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      TTAGCGTGTTCTTTAACCCGGACGTGTGGCAAATGTCCGTACAACATTGCAAACACGTAT 1498
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      TACATACTACATACAAAGGACGGAGAGAGCGAAGCTAAAGACGCCCCGGGGCAACATAAT 1558
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      ATTATGTGGACAGGCCGGTGATAAAGCATTTTACGTGGTGTGAAACAGTAAAACAAAACA 1618
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      AAATAGAAACTCTGGCAGACGATTAACGGGCTACAACAAATAAAAACACGCAACAGTATC 1678
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      GCGAGCCGTTAGTAAACGACGTTAGTATGTAGACAGAGAGAGAGAGACAGTGAGTGGAAG 1738
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      ------------------------------------------------------------
consensus_8982#3      ------------------------------------------------------------
consensus_8982#0      AAAGAGAGATAGAGGAAGCGAAAAAAAACGACGAAAGATTTTTGTAGTGTGTGTGTGCAA 1798
consensus_8982#1      ------------------------------------------------------------
                                                                                  

consensus_8982#2      -----------------------------------------------------
consensus_8982#3      -----------------------------------------------------
consensus_8982#0      ACGTTAGGTAAGGTTATATTATTCAAAATAAAATTTATGGTATGAAAAATAGT 1851
consensus_8982#1      -----------------------------------------------------