cluster # 8992

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Anopheles gambiae
cluster # 8992 cluster # 8992 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8992#0 length = 1280 sequences # 7
consensus_8992#1 length = 1038 sequences # 3

consensus_8992#2 length = 678 sequences # 2
consensus_8992#3 length = 309 sequences # 1

consensusID : consensus_8992#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1280
fasta sequence

                              [TCAATTACCGCGAGTCGACAACAAAGATCGCAAACGATCTTGACGAAATTTCTAAACATTCCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTTCTGCCATCGCTCGCACGCCATCGCCATTACACGACCAACATCTCCCAGCCCGTAGCGGTGCGTATCGTGGAGGTGGGCCCGCGGGATGGTTTGCAAAACGAGCCCACGATTCTGCCGGCCGCTGTCAAGATTGAGCTCATCAATCAACTCTCCGAAACGGGGCTACGTACGATTGAGGCAACCAGCTTCGTTAGCGCCAAATGGGTACCGCAGATGGGGGATAATGCGGAGGTGCTGAAGGGCATCAACAAGCTGCCGGGCATCTCGTACCCCGTGCTAACGCCGAACCTGAAAGGATTCCAGGCTGCGATGGCAGCCGGTGCCGAAGAGGTGGCCGTCTTTGGAGCCGCATCGGAAAGTTTCTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTTATGGAGGCGGCAAAACAGGCGAACGTTAAAGTACGCGGATACGTCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACGATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCGCCGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCAAACATTCTCACCTCGCTAGACTTTGGTATCGCGGTGGTGGATGCTTCTGTCTCGGGACTGGGCGGATGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGA-GGATGTGGTTTACATGCTGCACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTCCAGCGCCAATCGGAATCGAAGGTGAACCGTGCCATGAGAAAGAGCAATCCGAACGCTTGCTAGAAAACGTGCAACCTTAAAGGCTCTGCACACGCGGGTTAAAGTGCATTTACTAGCGTGTAAGATTTTTAAATCCATCTGATGGATGTAACGGCCTAAAACGAACATCAAAGTTCAATCAAACATTTTATACAAAATATTATTTTTCTACAAAGCATTTTTAATGTAAAAAAGAAACGAATAAATTAAACCGTAATATTAAAAAAAAA]

[+] EMBL CNS09JXM             [TCAATTACCGCGAGTCGACAACAAAGATCGCAAACGATCTTGACGAAATTTCTAAACATTTCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTTCTGCCATCGCTCGCACGCCATCGCCATTACACGACCAACATCTCCCAGCCCGTTGCGGTGCGTATCGTGGAGGTGAGCCCGCGGGATGGTTTGCAAAATGAGCCCACGATTCTGCCGGCCGCCGTCAAGATTGAGCTCATCAATCAACTGTCCGAAACGGGGCTGCGTACGATTGAGGCAACCAGCTTCGTTAGCGCCAAATGGGTCCCGCAGATGGGCGATAATGCGGAGGTACTGAAGGGCATCAACAAGCTGCCGGGCATTTCGTACCCTGTGCTAACGCCAAATCTCAAAGGATTCCAGGCGGCGATGGCAGCCGGTGCCGAAGAGGTGGCCGTCTTTGGAGCCGCATCGGAAAGTTTCTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTTATGGAGGCGGCAAAACAGGCGAACGTTAAAGTACGCGGATACGTCTCGACGGTAGT GGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACGATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCGCCGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCAAACATTCTCACCTCGCTAGACTTTGGTATCGCGGTGGTGGATGCTTCTGTCTCGGGACTGGGCGGATG CCGTACGCAAGGGGCGCCTCG                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM629831             [                         ccgCGCAAACGATCTTGACGAAATTTCTAAACATTCCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTTCTGCCATCGCTCGCACGCCATCGCCATTACACGACCAACATCTCCCAGCCCGTAGCGGTGCGTATCGTGGAGGTGGGCCCGCGGGATGGTTTGCAAAACGAGCCCACGATTCTGCCGGCCGCTGTCAAGATTGAGCTCATCAATCAACTCTCCGAAACGGGGCTACGTACGATTGAGGCAACCAGCTTCGTTAGCGCCAAATGGGTACCGCAGATGGGGGATAATGCGGAGGTGCTGAAGGGCATCAACAAGCTGCCGGGCATCTCGTACCCCGTGCTAACGCCGAACCTGAAAGGATTCCAGGCTGCGATGGCAGCCGGTGCCGAAGAGGTGGCCGTCTTTGGAGCCGCTTCGGAAAGTTTCTCGCGCAAAAATGTAAACTGCTCGGTTGACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX609867             [                                            GAAATTTCTAAACATTCCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTTGTGCCATCGCTCGCACGCCATCGCCATTACACGACCAACATCTCCCAGCCCGTAGCGGTGCGTATCGTGGAGGTGGGCCCGCGGGATGGTTTGCAAAACGAGCCCACGATTCTGCCGGCCGCTGTCAAGATTGAGCTCATCAATCAACTCTCCGAAACGGGGCTACGTACGATTGAGGCAACCAGCTTCGTTAGCGCCAAATGGGTACCGCAGATGGGGGATAATGCGGAGGTGCTGAAGGGCATCAACAAGCTGCCGGGCATCTCGTACCCCGTGCTAACGCCGAACCTGAAAGGATTCCAGGCTGCGATGGCAGCCGGTGCCGAAGAGGTGGCTGTCTTTGGAGCCGCTTCGGAAAGTTTCTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTTATGGAGGCGGCGAAAAAGGCGAACGTTAAAGTACGCGGATACGTCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AGA280789            [                                                                                      tttTTTTTCCAAAATGATGCGCTTTACCCGATTTCTGCCATCGCTCGCACGCCATCGCCATTACACGACCAACATCTCCCAGCCCGTAGCGGTGCGTATCGTGGAGGTGGGCCCGCGGGATGGTTTGCAAAACGAGCCCACGATTCTGCCGGCCGCTGTCAAGATTGAGCTCATCAATCAACTCTCCGAAACGGGGCTACGTACGATTGAGGCAACCAGCTTCGTTAGCGCCAAATGGGTACCGCAGATGGGGGATAATGCGGAGGTGCTGAAGGGCATCAACAAGCTGCCGGGCATCTCGTACCCCGTGCTAACGCCGAACCTGAAAGGATTCCAGGCTGCGATGGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09JXN             [                                                                                                                                                                                                                                                                                                                                                                                                                                ATTCCAGGCGGCGATGGCAGCCGGTGCCGAAGAGGTGGCCGTCTTTGGAGCCGCATCGGAAAGTTTCTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTTATGGAGGCGGCAAAACAGGCGAACGTTAAAGTACGCGGATACGTCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACGATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCGCCGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCAAACATTCTCACCTCGCTAGACTTTGGTATCGCGGTGGTGGATGCTTCTGTCTCGGGACTGGGCGGATGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGA GGATGTGGTTTACATGCTGCACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTTCAGCGCCAATCGGAATCGAAGGTGAACCGTGCCATGAGGAAGAGCAATCCGAACGCTTGCTAGAAAACGTGCAACCTTAAAGGCTCTGCACACGCGGGTTAAAGTGCATTTACTAGCTTGTAAGATTTTTAAATCCATCTGATGGATGTAACGGCCTAAAACGAACATCAAAGTTCAATCAAACATTTTATACAAAATATTATTTTTCTACAAAGCATTTTTAATGTAAAAAAGAAACGAATAAATTAAACCGTAATATTA        ]
[-] EMBL AGA282413            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCGAACATTCTCACCTCGCTGGACTTTGGTATCGCGGTGGTGGATGCTTCCGTCTCGNGACTGGGCGGATGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGA GGATGTGGTTTACATGCTGCACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTCCAGCGCCAATCGGAATCGAAGGTGAACCGTGCCATGAGAAAGAGCAATCCGAACGCTTGCTAGAAAACGTGCAACCTTAAAGGCTCTGCACACGCGGGTTAAAGTGCATTTACTAGCGTGTAAGATT                                                                                                                                              ]
[-] EMBL AGA280157            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGAGGGATGTGGTTTACATGTTGCACGGGCTGGTCATCGAGACGGGCATCGATTTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTCCAGCGCCAATCGGAATCGAAGGTGAACCGTGCCATGAGAAAGAGCAATCCGAACGCTTGCTAGAAAACGTGCAACCTTAAAGGCTCTGCACACGCGGGTTAAAGTGCATTTACTAGCGTGTAAGATTTCTAAATCCATCTGATGGATGTAACGGCCTAAAACGAACATCAAAGTTCAATCAAACATTTTATACAAAATATTATTTTTNTACAAAGCATTTTTAATGTAAAAAAGAAACGAATAAATTAAACCGTAATAGTCAAAAAAAA]




>consensus_8992#0
TCAATTACCGCGAGTCGACAACAAAGATCGCAAACGATCTTGACGAAATTTCTAAACATT
CCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTT
CTGCCATCGCTCGCACGCCATCGCCATTACACGACCAACATCTCCCAGCCCGTAGCGGTG
CGTATCGTGGAGGTGGGCCCGCGGGATGGTTTGCAAAACGAGCCCACGATTCTGCCGGCC
GCTGTCAAGATTGAGCTCATCAATCAACTCTCCGAAACGGGGCTACGTACGATTGAGGCA
ACCAGCTTCGTTAGCGCCAAATGGGTACCGCAGATGGGGGATAATGCGGAGGTGCTGAAG
GGCATCAACAAGCTGCCGGGCATCTCGTACCCCGTGCTAACGCCGAACCTGAAAGGATTC
CAGGCTGCGATGGCAGCCGGTGCCGAAGAGGTGGCCGTCTTTGGAGCCGCATCGGAAAGT
TTCTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTT
ATGGAGGCGGCAAAACAGGCGAACGTTAAAGTACGCGGATACGTCTCGACGGTAGTCGGA
TGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATC
GAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACGATCGGCGTCGGTACGCCCGGTTCC
TTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCGCCGGTCAACATGCTGGCCGTGCAC
TGTCACGATACGTACGGGCAGGCGCTGCCAAACATTCTCACCTCGCTAGACTTTGGTATC
GCGGTGGTGGATGCTTCTGTCTCGGGACTGGGCGGATGCCCGTACGCAAGGGGCGCCTCG
GGGAATGCGGCAACGGAGGATGTGGTTTACATGCTGCACGGGCTGGGTATCGAGACGGGC
ATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTCCAGCGCCAA
TCGGAATCGAAGGTGAACCGTGCCATGAGAAAGAGCAATCCGAACGCTTGCTAGAAAACG
TGCAACCTTAAAGGCTCTGCACACGCGGGTTAAAGTGCATTTACTAGCGTGTAAGATTTT
TAAATCCATCTGATGGATGTAACGGCCTAAAACGAACATCAAAGTTCAATCAAACATTTT
ATACAAAATATTATTTTTCTACAAAGCATTTTTAATGTAAAAAAGAAACGAATAAATTAA
ACCGTAATATTAAAAAAAAA

consensusID : consensus_8992#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1038
fasta sequence

                              [CGAAATTTCTAAACATTCCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTTCTGCCATCGCTCGCACGCCATCGCCATTACACGTACATACGCACGCTGGACGCAATCATCAACCGGGATCCGCAGATGATCATGTGCGTGGTGTCGAACAGCAAGTCGGACCGGTACACCGCCATCAAGAAGAAGTGCTGCGTGGAGCGGGCCATCCCGACGCAGATCATGGTGCAGAAAACGATCACGCCTAAGAGTGGCAACGTGCGCACGCTCATGTCGGTCGCGACCAAGGTCGTCATCCAGATGAACTGCAAGCTGGGCGGTGTGCCGTGGAAGGTGAAGATTCCGCTGAACGGGCTGATGACGATCGGGTTCGACGTGTGTCACGATTCGAAGGACAAGAGCAAATCGTTCGGTGCGATGGTGGCGACGCTCGATCACGACAACCGCGGCACGCCCAAATTCTTCTCCACCGTCAGCCACCACTCGAGCGGGGAGGAAATTTCCAACTATCTGCCGCTCAACACGGTCAAGGCGCTGAACGAGTATCGGCGCGAGTTTGGCGAGCTACCGAAGCGTATTATTTTCTATCGGGACGGTGTGAGCGACGGGCAGCTGCAGTACATCTACGACCACGAGGTGCGGTCGCTGGTGGAGAAGCTCGGCCAGATCTACAAGTCGGCCGGCATCGAGCAGGACGTGCTGCTGACGTTCTTCATCGTG-AACAAGCGCATCAACACGCGGTTCTTCGACCATCGGTTGAACCCGCGCCCGGGCACGGTGGTGGATAATGTAGTGACCCTGCCGCAGCGCACCGATTTCTACCTCGTCTCCCAGTCGGTGAAGCAGGGCACGGTATCGCCCACCGCGTACAACGTCATCTACGACACGTCCGGGCTGAAGATCGACCACCTGCAGATGCTGTCGTACAAACAGTGCCACCTGTACTACAACTGGTCCGGCACGACCCGGGTGCCGGCGGTGTGCCAGTACGCGCACAAGCTATCGTTCCTAGTAG]

[+] EMBL BX625436             [CGAAATTTCTAAACATTCCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTTCTGCCATCGCTCGCACGCCATCGCCATTACACGTACATACGCACGCTGGACGCAATCATCAACCGGGATCCGCAGATGATCATGTGCGTGGTGTCGAACAGCAAGTCGGACCGGTACACCGCCATCAAGAAGAAGTGCTGCGTGGAGCGGGCCATCCCGACGCAGATCATGGTGCAGAAAACGATCACGCCTAAGAGTGGCAACGTGCGCACGCTCATGTCGGTCGCGACCAAGGTCGTCATCCAGATGAACTGCAAGCTGGGCGGTGTGCCGTGGAAGGTGAAGATTCCGCTGAACGGGCTGATGACGATCGGGTTCGACGTGTGTCACGATTCGAAGGACAAGAGCAAATCGTTCGGTGCGATGGTGGCGACGCTCGATCACGACAACCGCGGCACGCCCAAATTCTTCTCCACCGTCAGCCACCACTCGAGCGGAGAGGAAATTTCCAACTATCTGCCGCTCAACACGGTCAAGGCGCTGAACGAGTATCGGCGCGAGTTTGGCGAGCTACCTAAGCGTATTATCTTCTACCGGGACGGTGTGAGCGACGGGCAGCTGCAGTACATCTACGACCACGAGGTGCGGTCGCTGGTAGAGAAGCTGGGCCAGATCTACAAGTCGGCCGGCATCGAGCAGGACGTGCTGCTGACGTTCTTCATCGTGAAACAAGCGCATCAACACGCGGGTCTTCGACCATCGGct                                                                                                                                                                                                                                                                 ]
[+] EMBL BM602738             [                                                                                                                                                                                                                         ccgGGAGCGGGCCATCCCGACGCAGATCATGGTGCAGAAAACGATCACGCCGAAGAGTGGCAACGTGCGCACGCTCATGTCGGTCGCGACCAAGGTCGTCATCCAGATGAACTGCAAGCTGGGCGGTGTGCCGTGGAAGGTGAAGATTCCGCTGAACGGGCTGATGACGATCGGGTTCGACGTGTGTCACGATTCGAAGGACAAGAGCAAATCGTTCGGTGCGATGGTGGCGACGCTCGATCACGACAACCGCGGCACGCCCAAATTCTTCTCCACCGTCAGCCACCACTCGAGCGGGGAGGAAATTTCCAACTATCTGCCGCTCAACACGGTCAAGGCGCTGAACGAGTATCGGCGCGAGTTTGGCGAGCTACCGAAGCGTATTATTTTCTATCGGGACGGTGTGAGCGACGGGCAGCTGCAGTACATCTACGACCACGAGGTGCGGTCGCTGGTGGAGAAGCTCGGCCAGATCTACAAGTCGGCCGGCATCGAGCAGGACGTGCTGCTGACGTTCTTCATCGTG AACAAGCGCATCAACACGCGGTTCTTCGACCATCGGTTGAACCCGCGCCCGGGCACGGTGGTGGATAATGTAGTGACCCTGCCGCAGCGCACCGATTTCTACCTCGTCTCCCAGTCGGTGAAGCAGGGCACGGTATCG                                                                                                                                                             ]
[+] EMBL BM612785             [                                                                                                                                                                                                                                                                                                                                                                                                                               ccgCAAGAGCAAATCGTTCGGTGCGATGGTGGCGACGCTCGATCACGACAACCGCGGCACGCCCAAATTCTTCTCCACCGTCAGCCACCACTCGAGCGGGGAGGAAATTTCCAACTATCTGCCGCTCAACACGGTCAAGGCGCTGAACGAGTATCGGCGCGAGTTTGGCGAGCTACCGAAGCGTATTATTTTCTATCGGGACGGTGTGAGCGACGGGCAGCTGCAGTACATCTACGACCACGAGGTGCGGTCGCTGGTGGAGAAGCTCGGCCAGATCTACAAGTCGGCCGGCATCGAGCAGGACGTGCTGCTGACGTTCTTCATCGTG AACAAGCGCATCAACACGCGGTTCTTCGACCATCGGTTGAACCCGCGCCCGGGCACGGTGGTGGATAATGTAGTGACCCTGCCGCAGCGCACCGATTTCTACCTCGTCTCCCAGTCGGTGAAGCAGGGCACGGTATCGCCCACCGCGTACAACGTCATCTACGACACGTCCGGGCTGAAGATCGACCACCTGCAGATGCTGTCGTACAAACAGTGCCACCTGTACTACAACTGGTCCGGCACGACCCGGGTGCCGGCGGTGTGCCAGTACGCGCACAAGCTATCGTTCCTAGTAG]




>consensus_8992#1
CGAAATTTCTAAACATTCCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGA
TGCGCTTTACCCGATTTCTGCCATCGCTCGCACGCCATCGCCATTACACGTACATACGCA
CGCTGGACGCAATCATCAACCGGGATCCGCAGATGATCATGTGCGTGGTGTCGAACAGCA
AGTCGGACCGGTACACCGCCATCAAGAAGAAGTGCTGCGTGGAGCGGGCCATCCCGACGC
AGATCATGGTGCAGAAAACGATCACGCCTAAGAGTGGCAACGTGCGCACGCTCATGTCGG
TCGCGACCAAGGTCGTCATCCAGATGAACTGCAAGCTGGGCGGTGTGCCGTGGAAGGTGA
AGATTCCGCTGAACGGGCTGATGACGATCGGGTTCGACGTGTGTCACGATTCGAAGGACA
AGAGCAAATCGTTCGGTGCGATGGTGGCGACGCTCGATCACGACAACCGCGGCACGCCCA
AATTCTTCTCCACCGTCAGCCACCACTCGAGCGGGGAGGAAATTTCCAACTATCTGCCGC
TCAACACGGTCAAGGCGCTGAACGAGTATCGGCGCGAGTTTGGCGAGCTACCGAAGCGTA
TTATTTTCTATCGGGACGGTGTGAGCGACGGGCAGCTGCAGTACATCTACGACCACGAGG
TGCGGTCGCTGGTGGAGAAGCTCGGCCAGATCTACAAGTCGGCCGGCATCGAGCAGGACG
TGCTGCTGACGTTCTTCATCGTGAACAAGCGCATCAACACGCGGTTCTTCGACCATCGGT
TGAACCCGCGCCCGGGCACGGTGGTGGATAATGTAGTGACCCTGCCGCAGCGCACCGATT
TCTACCTCGTCTCCCAGTCGGTGAAGCAGGGCACGGTATCGCCCACCGCGTACAACGTCA
TCTACGACACGTCCGGGCTGAAGATCGACCACCTGCAGATGCTGTCGTACAAACAGTGCC
ACCTGTACTACAACTGGTCCGGCACGACCCGGGTGCCGGCGGTGTGCCAGTACGCGCACA
AGCTATCGTTCCTAGTAG

consensusID : consensus_8992#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 678
fasta sequence

                              [CCGCGGACGCGTGGGCAGGCGGCGATGGCAGCCGGTGCCGAAGAGGTGGCTGTCTTTGGAGCTGCTTCGGAAAGTTTTTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTTATGGAGGCGGCGAAAAAGACGAACGTTAAAGTACGCGGATACGTCTCCACGGTAGTCGGATGTCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACTATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCACCGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCGAACATTCTCACCTCGCTGGACTTTGGTATCGCGGTGGTGGATGCTTCCGTCTCGGGACTGGGCGGATGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGAGGATGTGGTTTACATGCTGCACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTTCAGCGCCAATCGGAATCGAAGGTGAACCGTGCTATGAGGAAGAGCAATCCGAACGCTTGCTAGAAACCGTGC]

[+] EMBL BM628386             [CCGCGGACGCGTGGGCAGGCGGCGATGGCAGCCGGTGCCGAAGAGGTGGCTGTCTTTGGAGCTGCTTCGGAAAGTTTTTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTTATGGAGGCGGCGAAAAAGACGAACGTTAAAGTACGCGGATACGTCTCCACGGTAGTCGGATGTCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACTATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCACCGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCGAACATTCTCACCTCGCTGGACTTTGGTATCGCGGTGGTGGATGCTTCCGTCTCGGGACTGGGCGGATGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGAGGATGTGGTTTACATGCTGCACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTTCAGCGCCAATCGGAATCGAAGGTGAACCGTGCTATGAGGAAGAGCAATCCGAACGCTTGCTAGAAACCGTGC]
[+] EMBL BM614010             [                                                                                             ccgTGCTCGGTTGACGAGAGCATTGCCCGGTTCCAGGACGTTATGGAGGCGGCGAAAAAGGCGAACGTTAAAGTACGCGGATACGTCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACGATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCACCGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCGAACATTCTCACCTCGCTGGACTTTGGTATCGCGGTGGTGGATGCTTCCGTCTCGGGACTGGGCGGATGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGAGGATGTGGTTTACATGCTGCACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAGAAGCTCCAGCGCCAATCGGAATCGAAGGTGAACCGTGCCATG                                    ]




>consensus_8992#2
CCGCGGACGCGTGGGCAGGCGGCGATGGCAGCCGGTGCCGAAGAGGTGGCTGTCTTTGGA
GCTGCTTCGGAAAGTTTTTCGCGCAAAAATGTAAACTGCTCGGTTGACGAGAGCATTGCC
CGGTTCCAGGACGTTATGGAGGCGGCGAAAAAGACGAACGTTAAAGTACGCGGATACGTC
TCCACGGTAGTCGGATGTCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTG
GTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACTATCGGCGTC
GGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCACCGGTCAAC
ATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCGAACATTCTCACCTCG
CTGGACTTTGGTATCGCGGTGGTGGATGCTTCCGTCTCGGGACTGGGCGGATGCCCGTAC
GCAAGGGGCGCCTCGGGGAATGCGGCAACGGAGGATGTGGTTTACATGCTGCACGGGCTG
GGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTCATTTGTGAG
AAGCTTCAGCGCCAATCGGAATCGAAGGTGAACCGTGCTATGAGGAAGAGCAATCCGAAC
GCTTGCTAGAAACCGTGC

consensusID : consensus_8992#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 309
fasta sequence

                              [CCACTTAGCTCGCTAGTGTAATCTATCCCGCAGTACCAGCTACTGCCTGCCTGCCTTCCCTCGCACTCTGCCTCTGCCTGTGTCTGCTTTGTTGCTTCCCATCTTGCCGCTTCTCTTACTTCCGCGGTACGTCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACGATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCACCGGT]

[+] EMBL AGA281860            [CCACTTAGCTCGCTAGTGTAATCTATCCCGCAGTACCAGCTACTGCCTGCCTGCCTTCCCTCGCACTCTGCCTCTGCCTGTGTCTGCTTTGTTGCTTCCCATCTTGCCGCTTCTCTTACTTCCGCGGTACGTCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGATACGATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCACCGGT]




>consensus_8992#3
CCACTTAGCTCGCTAGTGTAATCTATCCCGCAGTACCAGCTACTGCCTGCCTGCCTTCCC
TCGCACTCTGCCTCTGCCTGTGTCTGCTTTGTTGCTTCCCATCTTGCCGCTTCTCTTACT
TCCGCGGTACGTCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGC
CGTGGTGCGCGTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTCGCTCGGCGA
TACGATCGGCGTCGGTACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGAT
CGCACCGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8992#0      TCAATTACCGCGAGTCGACAACAAAGATCGCAAACGATCTTGACGAAATTTCTAAACATT 60
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      -------------------------------------------CGAAATTTCTAAACATT 17
                                                                                  

consensus_8992#0      CCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTT 120
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      CCTGTGTAAATCGTTCCTTTTCCACCCCGTTCTTCCAAAATGATGCGCTTTACCCGATTT 77
                                                                                  

consensus_8992#0      CTGCCATCGCTCGCACGCCATCGCCATTACACGACCAACATCTCCCAGCCCGTAGCGGTG 180
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      CTGCCATCGCTCGCACGCCATCGCCATTACACGTACATACGCACGCTGGACGCAATCATC 137
                                                                                  

consensus_8992#0      CGTATCGTGGAGGTGGGCCCGCGGGATGGTTTGCAAAACGAGCCCACGATTCTGCCGGCC 240
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      AACCGGGATCCGCAGATGATCATGTGCGTGGTGTCGAACAGCAAGTCGGACCGGTACACC 197
                                                                                  

consensus_8992#0      GCTGTCAAGATTGAGCTCATCAATCAACTCTCCGAAACGGGGCTACGTACGATTGAGGCA 300
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      GCCATCAAGAAGAAGTGCTGCGTGGAGCGGGCCATCCCGACGCAGATCATGGTGCAGAAA 257
                                                                                  

consensus_8992#0      ACCAGCTTCGTTAGCGCCAAATGGGTACCGCAGATGGGGGATAATGCGGAGGTGCTGAAG 360
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      ACGATCACGCCTAAGAGTGGCAACGTGCGCACGCT------CATGTCGGTCGCGACCAAG 311
                                                                                  

consensus_8992#0      GGCATCAACAAGCTGCCGGGCATCTCGTACCCCGTGCTAACGCCGAACCTGAAAGGATTC 420
consensus_8992#2      ----------------------------------------CCGCGGACGCGTGGG----- 15
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      GTCGTCATCCAGATGAACTGCAAGCTGGGCGGTGTGCCGTGGAAGGTGAAGATTCCGCTG 371
                                                                                  

consensus_8992#0      CAGGCTGCGATGGCAGCCGGTGCCGAAGAGGTGGCCGTCTTTGGAGCCGCATCGGAAAGT 480
consensus_8992#2      CAGGCGGCGATGGCAGCCGGTGCCGAAGAGGTGGCTGTCTTTGGAGCTGCTTCGGAAAGT 75
consensus_8992#3      --------------------------------------CCACTTAGCTCGCTAGTGTAAT 22
consensus_8992#1      AACGGGCTGATGACGATCGGGTTCGACGTG-TGTCACGATTCGAAGGACAAGAGCAAATC 430
                                                                  **       *   *  

consensus_8992#0      TTCTCGCGCAAAAATGTAAACTGCTCGGTTGACGA-----GAGCATTGCCCGGTTCCAGG 535
consensus_8992#2      TTTTCGCGCAAAAATGTAAACTGCTCGGTTGACGA-----GAGCATTGCCCGGTTCCAGG 130
consensus_8992#3      CTATCCCGCAGTACCAGCTACTGCCTGCCTGCCTTCCCTCGCACTCTGCCTCTGCCTGTG 82
consensus_8992#1      GTTCGGTGCGATGGTGGCGAC-GCTCGATC-ACGACAACCGCGGCACGCCCAAATTCTTC 488
                       *     **          ** **  *     *       *      ***          

consensus_8992#0      AC-GTTAT--GGAGGCGGCAAAACAGGCG---AACGTTAAAGTACGCG------GATACG 583
consensus_8992#2      AC-GTTAT--GGAGGCGGCGAAAAAGACG---AACGTTAAAGTACGCG------GATACG 178
consensus_8992#3      TCTGCTTT--GTTGCTTCCCATCTTGCCG---CTTCTCTTACTTCCGC------GGTACG 131
consensus_8992#1      TCCACCGTCAGCCACCACTCGAGCGGGGAGGAAATTTCCAACTATCTGCCGCTCAACACG 548
                       *     *  *              *          *   * *              ***

consensus_8992#0      -TCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGC 642
consensus_8992#2      -TCTCCACGGTAGTCGGATGTCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGC 237
consensus_8992#3      -TCTCGACGGTAGTCGGATGCCCATACGAAGGTAAAATCAAACCGTCCGCCGTGGTGCGC 190
consensus_8992#1      GTCAAGGCGCTGAACGAGTATCGGCGCGAGTTTGGCGAGCTACCGA--AGCGTATTATTT 606
                       **    ** *   **  *  *    ***   *        ****     ***  *    

consensus_8992#0      GTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTC----GCTCGGCGATACGAT 698
consensus_8992#2      GTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTC----GCTCGGCGATACTAT 293
consensus_8992#3      GTGGTCGAGAAGCTGATCGAGATGGGCTGCTACGAGGTGTC----GCTCGGCGATACGAT 246
consensus_8992#1      TCTATCGGGACGGTGTGAGCGACGGGCAGCTGCAGTACATCTACGACCACGAGGTGCGGT 666
                          *** ** * **   * ** **** *** *      **     *   * * * *  *

consensus_8992#0      CGGCGTCGGT-ACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCGC 757
consensus_8992#2      CGGCGTCGGT-ACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCAC 352
consensus_8992#3      CGGCGTCGGT-ACGCCCGGTTCCTTTACCGAGATGTTGCGCGAGGTGACCAAGATCGCAC 305
consensus_8992#1      CGCTGGTGGAGAAGCTCGG---CCAGATCTACAAGTCGGCCGGCATCGAGCAGGACGTGC 723
                      **  *  **  * ** ***   *   * * * * ** *  **   *     **  **  *

consensus_8992#0      CGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCAAACATTC 817
consensus_8992#2      CGGTCAACATGCTGGCCGTGCACTGTCACGATACGTACGGGCAGGCGCTGCCGAACATTC 412
consensus_8992#3      CGGT-------------------------------------------------------- 309
consensus_8992#1      TGCTGACGTTCTTCATCGTGAACAAGCGC-ATCAACACGCGGTTCTTCGACCATCGGTTG 782
                       * *                                                        

consensus_8992#0      TCACCTCGCTAGACTTTGGTATCGCGGTGGTGGATGCTTCTGTCTCGGGAC-TGGGCGGA 876
consensus_8992#2      TCACCTCGCTGGACTTTGGTATCGCGGTGGTGGATGCTTCCGTCTCGGGAC-TGGGCGGA 471
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      AACCCGCGCCCGGGCACGGTGGTGGATAATGTAGTGACCCTGCCGCAGCGCACCGATTTC 842
                                                                                  

consensus_8992#0      TGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGAGGATGTGGTTTACATGCTG 936
consensus_8992#2      TGCCCGTACGCAAGGGGCGCCTCGGGGAATGCGGCAACGGAGGATGTGGTTTACATGCTG 531
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      TACCTCGTCTCCCAGTCGGTGAAGCAGGGCACGGTATCGCCCACCGCGTACAACGTCATC 902
                                                                                  

consensus_8992#0      CACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTC 996
consensus_8992#2      CACGGGCTGGGTATCGAGACGGGCATCGATCTGCCGAAGCTGGTGAACGTGGGCAAGTTC 591
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      TACGACACGTCCGGGCTGAAGATCGACCACCTGCAGATGCTGTCGTACA--AACAGTGCC 960
                                                                                  

consensus_8992#0      ATTTGTGAGAAGCTCCAGCGCCAATCGGAATCGAAGGTGAACCGTGCCATGAGAAAGAGC 1056
consensus_8992#2      ATTTGTGAGAAGCTTCAGCGCCAATCGGAATCGAAGGTGAACCGTGCTATGAGGAAGAGC 651
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      ACCTGTACTA--CAACTGGTCCGGCACGACCCGGGTGCCGGCGGTG-TGCCAGTACGCGC 1017
                                                                                  

consensus_8992#0      AATCCGAACGCTTGCTAGAAAACGTGCAACCTTAAAGGCTCTGCACACGCGGGTTAAAGT 1116
consensus_8992#2      AATCCGAACGCTTGCTAGAAACCGTGC--------------------------------- 678
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      ACAAGCTATCGTTCCTAGTAG--------------------------------------- 1038
                                                                                  

consensus_8992#0      GCATTTACTAGCGTGTAAGATTTTTAAATCCATCTGATGGATGTAACGGCCTAAAACGAA 1176
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      ------------------------------------------------------------
                                                                                  

consensus_8992#0      CATCAAAGTTCAATCAAACATTTTATACAAAATATTATTTTTCTACAAAGCATTTTTAAT 1236
consensus_8992#2      ------------------------------------------------------------
consensus_8992#3      ------------------------------------------------------------
consensus_8992#1      ------------------------------------------------------------
                                                                                  

consensus_8992#0      GTAAAAAAGAAACGAATAAATTAAACCGTAATATTAAAAAAAAA 1280
consensus_8992#2      --------------------------------------------
consensus_8992#3      --------------------------------------------
consensus_8992#1      --------------------------------------------