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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1868 fasta sequence
[CTTTTGGCCGATGG-AGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGGTATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTCACAGCTGTGAGCAAGTTTACAAACATGCTTACGAATAAAACCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT-AAATGCTACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCCCGAACATCGGCTCTCGAAGGCACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGC-AGAGTATAAC-CAGTGCATAAAAAAAATGTTAACAAAACGCGCGCTTTCTTTTCGCAATCCGATTCTAATCATTAGCGATTAATGTCTAAGAGCTTAGCTCATCCACTGCAGTGTGCCATCCTGCCCGAGAGTTGCCACACCGTTCGCCACCAACCGTAGTGCCTTCGGGTACGCCACGTGTTCCGATTGGTGAATGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGGCACGCGCTCCTGCAGGATGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCTTGTGTTCGGTGGCCACGNCCAGCACCATGCCGATGCCGCAGTTA]
[+] EMBL CNS08IFF [CTTTTGGCCGATGGCAGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGGTATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTCGCAGCTGTGAGCAAGTGGAGAAACATGCTTACGAATAAAACCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT AAATGCTACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTTCCTGAGCTTCGATGGGATCGGGTAGGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCCCGAACATCGGCTCTCGAAGGCACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATG ]
[+] EMBL CNS095KA [ tttttCGATGG AGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGGTATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTCACAGCTGTGAGCAAGTTTACAAACATGCTTACGAATAAAACCTTCCCAGTTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT ATATGCTACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTTGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAAAAGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCTCGAACATCGGCTCTCGAAGGCACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAA ]
[-] EMBL CNS095KB [ AGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTAACAGCTGTGAGCAAGTTTACAAACATGCTTACGAATAAAACCTTCCCAGTTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCAACACACGGCGGGGCGAATTATATAATAAAATG TACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGTTTTAACATCGGCTCTCGAAGGAACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGCGAGAGTATAACACAGTGCATAAAAAAAATG ]
[-] EMBL CNS08IFG [ GTTTACAAACATGCTTACGAATAAAACCTTCCCAGCTGTTTGGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT AAATG TACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGAGGCTGGTGAAAAAGCTACACCCCGAAAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCAAACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGCCTTCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACAAACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCCCGAACATCGGCTCTCGAAGGAACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATAAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGC AGAGTATAA ]
[-] EMBL BX618987 [ AGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGC AGAGTATAAC CAGTGCATAACTAAAATGTTAACAAAACGCGCGCTTTCTTTTCGCAATCCGATTCTAATCATTAGCGATTAATGTCTAAGAGCTTAGCTCATCCACTGCAGTGTGCCATCCTGCCCGAGAGTTGCCACACCGTTCGCCACCAACCGTAGTGCCTTCGGGTACGCCACGTGTTCCGATTGGTGAATGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGGGACGCGCTCCTGCAGGATGATTGCGCCCGTGTCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGAATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTAATCAGCGAACCCTTCCAGCGTTTCACGAATCCTTCGGAAAGGATGC ]
[-] EMBL BX620778 [ TAGTGCTTTCGGGTATGCCACGTGTTCCGCTTGGTGAATGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGNCACGCGCTCCTGCAGGATGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCTGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCTTGTGTTCGGTGGCCACGNCCAGCACCATGCCGATGCCG ]
[-] EMBL BX627636 [ CGCTCGGTAAGTGCTTCNTCGGTGTCGCNTCTTAGAATCGGCACGCGCTCCTGCAGGATGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCTGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCA ]
[-] EMBL BX606707 [ TCCCGCTCCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCTCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCCGCCCGTTCCAGCCCAAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCACCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCTGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCTTGTGTTCGGTGGCCACGACCAGCACCATGCCGATGCCGCAGTTA]
[-] EMBL BX612178 [ CCGCTGCGCATGAATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTATTCAGCGAACCCTTCCAGCGTTTCACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCCCCTTg ]
[-] EMBL BX613687 [ GCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCT ]
consensusID : consensus_8994#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 780 fasta sequence
[GCAGATTCGCCCCCGAGGTACATGGCAGTGTGATATAATATTGTGCAATATTAGCGATAATCATTCAGAACCACTTTGTGCTATTATCAACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGTGATGGTCCACACACTGGCTGGNGNGCTGAATTATATAATAACATGCTACCTGCTTGCTGGGTGTAAATGAACAGTCCTGACCAGAACACTGGTCCTGGCAGGCTTACCTGACTGCTGGTGAAAAAGCTACACCCCTGACAGTGGCCAACCGNGAATGCGAGCTGCTGNGAACTGATTCCATGTGAACGTGNGACATGCTGCCTTTCGCATACTGCAGTGANAACACGTTTGCCAAAGCGCTGCCTGTTGGCATCGTGGAGTGACCTGCGTGAGTGAGGTGAAGTGTGTACTGACATCAAACACACTGGCCCGCAGCACCTGCAGTACCTGAGCTTCGATGGGATCGGGTACTNGAACTGCCCNGCCCAGCTGCCAAAAGCAATACCAGACGGTGCGCTGCCTGCAAAGCTGCAGGAACGCTGTGCTCGAACTATCTGGCTCTCGAAGTGCGCAATGCTGACCGAAACGGTGGTTCATGNATGAAGGGCCGGACGTACTTTACCGACCGGCCCGCCCTCCGCCCCCCCCGCTNCCGNGCCTTACCGCNCTCCGGCTGCTCGCTCGNCNNGGGCACTCCTCGGNG]
[+] EMBL AL931385 [GCAGATTCGCCCCCGAGGTACATGGCAGTGTGATATAATATTGTGCAATATTAGCGATAATCATTCAGAACCACTTTGTGCTATTATCAACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGTGATGGTCCACACACTGGCTGGNGNGCTGAATTATATAATAACATGCTACCTGCTTGCTGGGTGTAAATGAACAGTCCTGACCAGAACACTGGTCCTGGCAGGCTTACCTGACTGCTGGTGAAAAAGCTACACCCCTGACAGTGGCCAACCGNGAATGCGAGCTGCTGNGAACTGATTCCATGTGAACGTGNGACATGCTGCCTTTCGCATACTGCAGTGANAACACGTTTGCCAAAGCGCTGCCTGTTGGCATCGTGGAGTGACCTGCGTGAGTGAGGTGAAGTGTGTACTGACATCAAACACACTGGCCCGCAGCACCTGCAGTACCTGAGCTTCGATGGGATCGGGTACTNGAACTGCCCNGCCCAGCTGCCAAAAGCAATACCAGACGGTGCGCTGCCTGCAAAGCTGCAGGAACGCTGTGCTCGAACTATCTGGCTCTCGAAGTGCGCAATGCTGACCGAAACGGTGGTTCATGNATGAAGGGCCGGACGTACTTTACCGACCGGCCCGCCCTCCGCCCCCCCCGCTNCCGNGCCTTACCGCNCTCCGGCTGCTCGCTCGNCNNGGGCACTCCTCGGNG]
consensusID : consensus_8994#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 633 fasta sequence
[GCAGAATCGCCACGAGNTNNCATGAACAACTTTGCGCTATCATCAGCATCAACTCCATTACACAGCTGTGAGCAAGTTTACAAACATGCTTACGTAATAAAACCTTCCCAGCTGTTTCGCTGGGTGCAGGCACTTATGGGGAAGCGTCTTATCTGCTTCAGCGATGGATCCACGACGAGCAGGCAGGGGCCGAATTATATAATAAATGCTACCGACCTGACTGGGTGTAAATGANACAGTCCGACCATGAAGCACGGTCCTGGCANAGCTTACCTGACGCTGGTGAAGAGATAGCTACTACCCCGACAGTGGGCACCCGGAAGCTGAGCGCGGAAGCGATTCCAGGAAGTGGACANGGGCCTTTCGCATACTTGCAGGNAAAGTCTGCCAATAGCGCGCCGTGGCACTCGCGGAGGACCTGCTGCGAGGAGGTGAAGGTGTACGAGATCGAAGACATCGACTGGACCCGAAGCGACCGGCCAGTACCTGAGACTTCGATGGGATCAGGGTACGGAAGCGCACCGGCCCAGANGCCTAAGAAGCAATACCAGACGAGATGNCGCGCACGCGAAAGCGCAGGGAACAGCGTGCTACGAACCAGTCGGGNTACTCGGAAGGCACAAGGCGACCGAA]
[+] EMBL BX467264 [GCAGAATCGCCACGAGNTNNCATGAACAACTTTGCGCTATCATCAGCATCAACTCCATTACACAGCTGTGAGCAAGTTTACAAACATGCTTACGTAATAAAACCTTCCCAGCTGTTTCGCTGGGTGCAGGCACTTATGGGGAAGCGTCTTATCTGCTTCAGCGATGGATCCACGACGAGCAGGCAGGGGCCGAATTATATAATAAATGCTACCGACCTGACTGGGTGTAAATGANACAGTCCGACCATGAAGCACGGTCCTGGCANAGCTTACCTGACGCTGGTGAAGAGATAGCTACTACCCCGACAGTGGGCACCCGGAAGCTGAGCGCGGAAGCGATTCCAGGAAGTGGACANGGGCCTTTCGCATACTTGCAGGNAAAGTCTGCCAATAGCGCGCCGTGGCACTCGCGGAGGACCTGCTGCGAGGAGGTGAAGGTGTACGAGATCGAAGACATCGACTGGACCCGAAGCGACCGGCCAGTACCTGAGACTTCGATGGGATCAGGGTACGGAAGCGCACCGGCCCAGANGCCTAAGAAGCAATACCAGACGAGATGNCGCGCACGCGAAAGCGCAGGGAACAGCGTGCTACGAACCAGTCGGGNTACTCGGAAGGCACAAGGCGACCGAA]
consensusID : consensus_8994#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence
[AGAATCCCCGAGGTTTGTGCTATTATCACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAATAAATGCTACCGCTTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAGGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTATCGCATACTGCACGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGNAGGACCTGCGGTGAGGAGGTGAACGGTGTACGACATCAACANCACACTGCCCGCAGACACCGGCCAGTACCTGAGCTTCGACTGGGCGACTCGGGTAACGGAAACGCCCGACCAGACGCCNAAAAGCAATACCAGAACGGTGCGCAGCCGGCCAAAGGCCGCAGCGAANCGGCGTGCTCCGAACATNCGNACTACTCGA]
[+] EMBL AL696088 [AGAATCCCCGAGGTTTGTGCTATTATCACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAATAAATGCTACCGCTTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAGGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTATCGCATACTGCACGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGNAGGACCTGCGGTGAGGAGGTGAACGGTGTACGACATCAACANCACACTGCCCGCAGACACCGGCCAGTACCTGAGCTTCGACTGGGCGACTCGGGTAACGGAAACGCCCGACCAGACGCCNAAAAGCAATACCAGAACGGTGCGCAGCCGGCCAAAGGCCGCAGCGAANCGGCGTGCTCCGAACATNCGNACTACTCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8994#0 CTTTTGGCCGATGGAGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGG 60
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ---------------------------GCAGATTCGCCCCCGAGGTACATGGCAGTGTGA 33
consensus_8994#0 TATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCAT 120
consensus_8994#2 -----------GCAGAATCGCCACGAGNTNNCATGAACAACTTTGCGCTATCATCAGCAT 49
consensus_8994#3 -----------------------AGAATCCCCGAGG-----TTTGTGCTATTATCA-CAT 31
consensus_8994#1 TATAATATTGTGCAATATTAGCGATAATCATTCAGAACCACTTTGTGCTATTATCAACAT 93
* * **** ***** **** ***
consensus_8994#0 CAACTCCATT-CACAGCTGTGAGCAAGTTTACAAACATGCTTACG-AATAAAACCTTCCC 178
consensus_8994#2 CAACTCCATTACACAGCTGTGAGCAAGTTTACAAACATGCTTACGTAATAAAACCTTCCC 109
consensus_8994#3 CAACTCCATT-CACGGCTGTGAGCAAGTTTGCAAACATGCTTACG-AATAAAAGCTTCCC 89
consensus_8994#1 CAACTCCATT-CACGGCTGTGAGCAAGTTTGCAAACATGCTTACG-AATAAAAGCTTCCC 151
********** *** *************** ************** ******* ******
consensus_8994#0 AGCTGTTTCGCTGG-TGCAG-CA-TTATGGGA----GCTCTTTCTGCTTCAG-GATGG-T 229
consensus_8994#2 AGCTGTTTCGCTGGGTGCAGGCACTTATGGGGAAGCGTCTTATCTGCTTCAGCGATGGAT 169
consensus_8994#3 AGCTGTTTCGCTGG-TGCAG-CA-TTATGGGA----GCTCTTTCTGCTTCAG-GATGG-T 140
consensus_8994#1 AGCTGTTTCGCTGG-TGCAG-CA-TTATGGGA----GCTCTTTCTGCTTCAGTGATGG-T 203
************** ***** ** ******* * * ********** ***** *
consensus_8994#0 CCACACACGGC------GGGGCGAATTATATAATAA-ATGCTACCG-CCTG-CTGGGTGT 280
consensus_8994#2 CCACGACGAGCAGGCAGGGGCCGAATTATATAATAA-ATGCTACCGACCTGACTGGGTGT 228
consensus_8994#3 CCACACACGGC------GGGGCGAATTATATAATAA-ATGCTACCG-CTTG-CTGGGTGT 191
consensus_8994#1 CCACACACTGGCTG-GNGNGCTGAATTATATAATAACATGCTACCTGCTTG-CTGGGTGT 261
**** * * * ************** ******** * ** ********
consensus_8994#0 AAATGAA-CAGTCC-GACCA--GAACAC-GGTCC-GGCAA-GCTTACCTGAC-GCTGGTG 332
consensus_8994#2 AAATGANACAGTCC-GACCATGAAGCAC-GGTCCTGGCANAGCTTACCTGAC-GCTGGTG 285
consensus_8994#3 AAATGAA-CAGTCC-GACCA--GAACAC-GGTCC-GGCAG-GCTTACCTGAC-GCTGGTG 243
consensus_8994#1 AAATGAA-CAGTCCTGACCA--GAACACTGGTCCTGGCAG-GCTTACCTGACTGCTGGTG 317
****** ****** ***** * *** ***** **** *********** *******
consensus_8994#0 AAAA---AGCTAC-ACCCCGACAGTGGCCACCCGGAAGC--GAGC-GC--GGAA-CGATT 382
consensus_8994#2 AAGAGATAGCTACTACCCCGACAGTGGGCACCCGGAAGCT-GAGC-GC--GGAAGCGATT 341
consensus_8994#3 AAAA---AGCTAC-ACCCCGACAGTGG-CACCCGGAAGC--GAGC-GC--GGAA-CGATT 292
consensus_8994#1 AAAA---AGCTACACCCCTGACAGTGGCCAACCGNGAATGCGAGCTGCTGNGAACTGATT 374
** * ****** *** ******** ** *** * **** ** *** ****
consensus_8994#0 CCA---GGAAGTGG-ACA-GCG-CCTTTCGCATACT-GCAGGAAAA---GTTTGCCAA-A 431
consensus_8994#2 CCA---GGAAGTGG-ACA-NGGGCCTTTCGCATACTTGCAGGNAAA---GTCTGCCAATA 393
consensus_8994#3 CCA---GGAAGTGG-ACA-GCGCCTTATCGCATACTGCACGGAAAA---GTTTGCCAA-A 343
consensus_8994#1 CCATGTGAACGTGNGACATGCTGCCTTTCGCATACTGCAGTGANAACACGTTTGCCAA-A 433
*** * * *** *** * * ********* * ** ** ****** *
consensus_8994#0 GCGC-GCCG--TGGCA-TCGTGGAG-GACCTGC-GCGAG-GAGGTGAA-GGTGTAC-GAC 482
consensus_8994#2 GCGC-GCCG--TGGCACTCGCGGAG-GACCTGCTGCGAG-GAGGTGAA-GGTGTAC-GAG 446
consensus_8994#3 GCGC-GCCG--TGGCATCGTGGNAG-GACCTGCGGTGAG-GAGGTGAACGGTGTAC-GAC 397
consensus_8994#1 GCGCTGCCTGTTGGCA-TCGTGGAGTGACCTGC-GTGAGTGAGGTGAAGTGTGTACTGAC 491
**** *** ***** * ** ******* * *** ******** ****** **
consensus_8994#0 ATCAA--ACACACTGCC-----CCGCAGCACC--GCCAGTACCTGAG-CTTCGATGGGA- 531
consensus_8994#2 ATCGA--AGACATCGACTGGACCCGAAGCGACCGGCCAGTACCTGAGACTTCGATGGGA- 503
consensus_8994#3 ATCAACANCACACTGCC------CGCAGACACCGGCCAGTACCTGAG-CTTCGACTGGGC 450
consensus_8994#1 ATCAA--ACACACTGGC-----CCGCAGCACCT--GCAGTACCTGAG-CTTCGATGGGA- 540
*** * *** * * ** ** * *********** ****** **
consensus_8994#0 ---TC-GGGTACGGAA---CGCCCGCCCAG-CGCC--AAAAGCAATACCAGACGGT---G 578
consensus_8994#2 ---TCAGGGTACGGAAGCGCACCGGCCCAGANGCCTAAGAAGCAATACCAGACGAGATGN 560
consensus_8994#3 GACTCGGGTAACGGAAA--CGCCCGACCAGACGCCN-AAAAGCAATACCAGAACGGTGCG 507
consensus_8994#1 ---TC-GGGTACTNGAACTGCCCNGCCCAGCTGCC--AAAAGCAATACCAGACGGT---G 591
** ** ** * ** * **** *** * *************
consensus_8994#0 CGCGC-CGCCAAAG--CGCAG-GAAC--GCGTGCC-CGAAC--ATCGGCTCTC---GAAG 626
consensus_8994#2 CGCGCACGCGAAAG--CGCAG-GGAACAGCGTGCTACGAACCAGTCGGGNTACTCGGAAG 617
consensus_8994#3 CA-GCCGGCCAAAGGCCGCAGCGAANCGGCGTGCTCCGAAC-ATNCGNACTACTCGA--- 562
consensus_8994#1 CGCTGCCTGCAAAG-CTGCAG--GAACGCTGTGCT-CGAACTATCTGGCTCTC--GAAGT 645
* **** **** * **** ***** * *
consensus_8994#0 GCACAA-G-CGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAA 684
consensus_8994#2 GCACAA-GGCGACCGAA------------------------------------------- 633
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 GCGCAATGCTGACCGAAACGGTGGTTCATGNATGAAGGGCCGGACGTACTTTACC---GA 702
consensus_8994#0 TCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGA 744
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 CCGGCCCGCCCTCCGCCCCCCCCGCTNCCGNGCCTTACCGCNCTCCGGCTGCTCGCTCGN 762
consensus_8994#0 GGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAA 804
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 CNNGGGCACTCCTCGGNG------------------------------------------ 780
consensus_8994#0 ACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCA 864
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 CGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTT 924
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 AGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGCAGAGTATAACCAGT 984
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 GCATAAAAAAAATGTTAACAAAACGCGCGCTTTCTTTTCGCAATCCGATTCTAATCATTA 1044
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 GCGATTAATGTCTAAGAGCTTAGCTCATCCACTGCAGTGTGCCATCCTGCCCGAGAGTTG 1104
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 CCACACCGTTCGCCACCAACCGTAGTGCCTTCGGGTACGCCACGTGTTCCGATTGGTGAA 1164
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 TGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGGCACGCGCTCCTGCAGGA 1224
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 TGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGT 1284
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 CTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCCG 1344
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 GATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCA 1404
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 TAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCG 1464
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 CATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGG 1524
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 CCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTT 1584
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 CGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTC 1644
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 CCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACA 1704
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 TCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTT 1764
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 TCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCT 1824
consensus_8994#2 ------------------------------------------------------------
consensus_8994#3 ------------------------------------------------------------
consensus_8994#1 ------------------------------------------------------------
consensus_8994#0 TGTGTTCGGTGGCCACGNCCAGCACCATGCCGATGCCGCAGTTA 1868
consensus_8994#2 --------------------------------------------
consensus_8994#3 --------------------------------------------
consensus_8994#1 --------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||