cluster # 9019

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Anopheles gambiae
cluster # 9019 cluster # 9019 Sequences # 13 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9019#0 length = 1010 sequences # 2
consensus_9019#1 length = 1007 sequences # 7

consensus_9019#2 length = 688 sequences # 2
consensus_9019#3 length = 511 sequences # 1
consensus_9019#4 length = 408 sequences # 1

consensusID : consensus_9019#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1010
fasta sequence

                              [TGCTGACCATGGCACTGCCCTACTATCTGCAAGACCCGGAAGCACCGTTCCCGCATCTGTTCGAGTCGATCGAATGGCACGCCATTAAGTGGATCGTCTCGATCGGTGCAATCTTTGCGCTCTGTACCAGCCTGCTCGGTGCAATGTTTCCGCTGCCTCGCGTCCTGTACGCCATGTCGTCGGACGGCATCATCTACAAGAAGCTACAGACGGTCCACCCGAAAACGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGNGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTNCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCCGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCNAACGAATCAACGTANGGGGTTGCGTTCGTTACT]

[+] EMBL BX626224             [TGCTGACCATGGCACTGCCCTACTATCTGCAAGACCCGGAAGCACCGTTCCCGCATCTGTTCGAGTCGATCGAATGGCACGCCATTAAGTGGATCGTCTCGATCGGTGCAATCTTTGCGCTCTGTACCAGCCTGCTCGGTGCAATGTTTCCGCTGCCTCGCGTCCTGTACGCCATGTCGTCGGACGGCATCATCTACAAGAAGCTACAGACGGTCCACCCGAAAACGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGNGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTNCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCAC                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX620069             [                                                                                                                                                                                                                                                                                                                                                   ACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCCGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCNAACGAATCAACGTANGGGGTTGCGTTCGTTACT]




>consensus_9019#0
TGCTGACCATGGCACTGCCCTACTATCTGCAAGACCCGGAAGCACCGTTCCCGCATCTGT
TCGAGTCGATCGAATGGCACGCCATTAAGTGGATCGTCTCGATCGGTGCAATCTTTGCGC
TCTGTACCAGCCTGCTCGGTGCAATGTTTCCGCTGCCTCGCGTCCTGTACGCCATGTCGT
CGGACGGCATCATCTACAAGAAGCTACAGACGGTCCACCCGAAAACGCAAACACCTGTGC
TGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGC
AGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTG
TACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG
NGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT
CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCG
GCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGAC
TGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTNCCTGCAGCCGACGG
ACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGT
TCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTT
GGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAGGGCG
AGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCG
GGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCCGGCAAAATTCCAAGGTGCAC
CGATGTACGTGATAGCNAACGAATCAACGTANGGGGTTGCGTTCGTTACT

consensusID : consensus_9019#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1007
fasta sequence

                              [CGGCAAGATCTCGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG-CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG-G-GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA-GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTACCTCGAGACATTT]

[+] EMBL CNS09LY8             [CGGCAAGATCTCGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAG TTGg                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS09647             [       ATCTCGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGA CAGGGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGT                                               ]
[+] EMBL CNS09HSL             [           CGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCCCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCGACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAGTGTGCGAGCGGTAACACACGAATGCGG                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09648             [                                                                                 CTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCCCGAGGTGATTCGGCAGCTCGTTAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTCCGGCTCTCCCTCG        ]
[-] EMBL CNS09HSM             [                                                                                                                            CGTGTTTATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTTAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTTTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGAACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCGACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGAATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTAACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTA             ]
[+] EMBL BX614251             [                                                                                                                                                                                                                                                   GCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09LY9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTGTACCTCA GGTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTAAATAGAGACATTT]




>consensus_9019#1
CGGCAAGATCTCGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCG
CGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGC
AGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGC
GTGACCGTGCCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACG
AAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGT
GCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATC
GCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAG
CCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATC
AGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTC
AGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATA
GAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGAC
AATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAA
GGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCA
AAGTGAGGCGTCAGTATTATGGCGGCGTGAGCAGGATTCCCGCGGGCTGCATCAATGGCG
GTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACA
AAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGT
GATAATTATTGCATACTAGTTGTTTAAGGATCTACCTCGAGACATTT

consensusID : consensus_9019#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence

                              [CCGCCCACGCGTCCGCTCGACCGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGTGCAATAACCCTCCGGAGCGTAACAATGCGAGCGGACGGTCCCTTGCGTCGGTTCTGGTCAGCGTTGACGCGGAAGAAACAGAACGAAGACGATGGGTCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGCA-GTACGCTCGGTCTCGGTGTGTACGTTCTGGCCGGTTCGGTGGCACGCG-AACAGGCCGGTCCGGCCGTCGTTGTCTCGATTCCTGGGTGGCGGCAGTCGCTTCCGCCATTGCCGCCTTGTGCTATGCCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGTCTACAGTTACGTGAGCATCGGCGAGTTTACTGCCTTCACGATCGGTTGGAATCTGATTCTGGAGTACGTGATCGGCACGTCCAGCGTGGCCCGTGGCATGAGCGGCTACATCGACTCGCTGGTGGACAACAAAATAAGCAAAGCGATGCGCGAAGCTATGCCGATCGATGTCGACTTCCTGTCGGACTATCCGGACTTTTTCTCGTTCGTCGTGGTGC]

[+] EMBL BM618871             [CCGCCCACGCGTCCGCTCGACCGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGTGCAATAACCCTCCGGAGCGTAACAATGCGAGCGGACGGTCCCTTGCGTCGGTTCTGGTCAGCGTTGACGCGGAAGAAACAGAACGAAGACGATGGGTCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGCA GTACGCTCGGTCTCGGTGTGTACGTTCTGGCCGGTTCGGTGGCACGCG AACAGGCCGGTCCGGCCGTCGTTGTCTCGATTCCTGGGTGGCGGCAGTCGCTTCCGCCATTGCCGCCTTGTGCTATGCCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGTCTACAGTTACGTGAGCATCGGCGAGTTTACTGCCTTCACGATCGGTTGGAATCTGATTCTGGAGTACGTGATCGGCACGTCCAGCGTGGCCCGTGGCATGAGCGGCTACATCGACTCGCTGGTGGACAACAAAATAAGCAAAGCGATGCGCGAAGCTATGCCGATCGATGTCGACTTCCTGTCGGACTATCCGGACTTTTTCTCGTTCGTCGTGGTGC]
[+] EMBL BM629303             [                  ccgCGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGTGCAATAACCCTCCGGAGCGTAACAATGCGAGCGGACGGTCCCTTGCGTCGGTTCTGGTCAGCGTTGACGCGGAAGAAACAGAACGAAGACGATGGGTCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGCATGTACGCTCGGTCTCGGTGTGTACGTTCTGGCCGGTTCGGTGGCACGCGTAACAGGCCGGTCCGGCCGTCATTGTCTCG TTCCT GGTGGCGGCCGTCGCTTCCGCCATTGCCGCCTTGTGCTATGTCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGT                                                                                                                                                                                                                          ]




>consensus_9019#2
CCGCCCACGCGTCCGCTCGACCGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAG
TTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCC
GTGTGCAGCTCGTGTTGATTTCTGTGCAATAACCCTCCGGAGCGTAACAATGCGAGCGGA
CGGTCCCTTGCGTCGGTTCTGGTCAGCGTTGACGCGGAAGAAACAGAACGAAGACGATGG
GTCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGG
CAGTACGCTCGGTCTCGGTGTGTACGTTCTGGCCGGTTCGGTGGCACGCGAACAGGCCGG
TCCGGCCGTCGTTGTCTCGATTCCTGGGTGGCGGCAGTCGCTTCCGCCATTGCCGCCTTG
TGCTATGCCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGTCTACAGTTAC
GTGAGCATCGGCGAGTTTACTGCCTTCACGATCGGTTGGAATCTGATTCTGGAGTACGTG
ATCGGCACGTCCAGCGTGGCCCGTGGCATGAGCGGCTACATCGACTCGCTGGTGGACAAC
AAAATAAGCAAAGCGATGCGCGAAGCTATGCCGATCGATGTCGACTTCCTGTCGGACTAT
CCGGACTTTTTCTCGTTCGTCGTGGTGC

consensusID : consensus_9019#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 511
fasta sequence

                              [CCCAGGTTTAGTTGCGCTACAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCC]

[+] EMBL AL694285             [CCCAGGTTTAGTTGCGCTACAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCC]




>consensus_9019#3
CCCAGGTTTAGTTGCGCTACAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGAC
CGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCT
GTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATG
CGGCATTCTGGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAG
GACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGA
CGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTG
TGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCG
TTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCACTCGATAGAGGG
CGAGCGGTTACTCACGAATGCGGAGCTTGCC

consensusID : consensus_9019#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 408
fasta sequence

                              [CCGCCCACGCGTCCGGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCT]

[+] EMBL BM598498             [CCGCCCACGCGTCCGGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCT]




>consensus_9019#4
CCGCCCACGCGTCCGGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGC
GATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTT
GCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACT
GCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCG
CGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCAT
TTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAA
CGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9019#0      TGCTGACCATGGCACTGCCCTACTATCTGCAAGACCCGGAAGCACCGTTCCCGCATCTGT 60
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      ------------------------------------------------------------
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ------------------------------------------------------------
                                                                                  

consensus_9019#0      TCGAGTCGATCGAATGGCACGCCATTAAGTGGATCGTCTCGATCGGTGCAATCTTTGCGC 120
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      ------------------------------------------------------------
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ------------------------------------------------------------
                                                                                  

consensus_9019#0      TCTGTACCAGCCTGCTCGGTGCAATGTTTCCGCTGCCTCGCGTCCTGTACGCCATGTCGT 180
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      ------------------------------------------------------------
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ------------------------------------------------------------
                                                                                  

consensus_9019#0      CGGACGGCATCATCTACAAGAAGCTACAGACGGTCCACCCGAAAACGCAAACACCTGTGC 240
consensus_9019#4      ------------------------------CCGCCCACGCGTCCG-GCAAACACCTGTGC 29
consensus_9019#1      ---------------------------------------------CGGCAAGATCTCGAC 15
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ---------------------------------------CCGCCCACGCGTCCGCTCGAC 21
                                                                                  

consensus_9019#0      TGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGC 300
consensus_9019#4      TGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGC 89
consensus_9019#1      CGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATC 75
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      CGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATC 81
                                                                                  

consensus_9019#0      AGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTG 360
consensus_9019#4      AGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTG 149
consensus_9019#1      TATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTT 135
consensus_9019#3      -----------------------------------------------CCCAGGTTTAGTT 13
consensus_9019#2      TATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTT 141
                                                                          * * * * 

consensus_9019#0      TACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 420
consensus_9019#4      TACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 209
consensus_9019#1      C--------TGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 187
consensus_9019#3      ----------GCGCTAC-AGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 62
consensus_9019#2      C--------TGTGCAATAACCCTCCGGA---GCGTAACAATGCG--AGCGGACGGTCCCT 188
                                * ** *  *  *   ***   **     * * **  **    **   ** 

consensus_9019#0      NGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 480
consensus_9019#4      TGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 269
consensus_9019#1      TGCCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 247
consensus_9019#3      TGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 122
consensus_9019#2      TGC----GTCGGTTCTGGTCAGCGTTGA-CGCGGAAGAAACAGAACGAAGACGATG--GG 241
                       **    *  * *** *     ***  * ****   *  *   * **  ***** *  * 

consensus_9019#0      CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 539
consensus_9019#4      CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 328
consensus_9019#1      CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 306
consensus_9019#3      CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 181
consensus_9019#2      TCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGC 301
                       *   *  *  *         *   *  ** *  * *   **   *    *****   **

consensus_9019#0      GGCATTCTGG-TACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 598
consensus_9019#4      GGCATTCTGG-TACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 387
consensus_9019#1      GGCATTCTGG-TACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 365
consensus_9019#3      GGCATTCTGGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 241
consensus_9019#2      AGTACGCTCGGTCTCGGT----GTGTACGTTC-TGGCCGGTTCGGTGGCACGCGAACAGG 356
                       * *  ** * *  ***     *  *** **   **    * *   ***       ****

consensus_9019#0      ACTGGC-GATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTNC-CTGCAGCCG 656
consensus_9019#4      ACTGGC-GATACTCGTTGCCCT-------------------------------------- 408
consensus_9019#1      ACTGGC-GATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCC-CTGCAGCCG 423
consensus_9019#3      ACTGGC-GATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCC-CTGCAGCCG 299
consensus_9019#2      CCGGTCCGGCCGTCGTTGTCTCGATTCCTGGG-TGGCGGCAGTCGCTTCCGCCATTGCCG 415
                       * * * *    ****** *                                        

consensus_9019#0      AC--GGACAAAATTAAGCTTACATTTAAAGTGCCG----CTAGTGCCGCTGCTGCCACTG 710
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      AC--GGACAAAATTAAGCTTACATTTAAAGTGCCG----CTAGTGCCGCTGCTGCCACTG 477
consensus_9019#3      AC--GGACAAAATTAAGCTTACATTTAAAGTGCCG----CTAGTGCCGCTGCTGCCACTG 353
consensus_9019#2      CCTTGTGCTATGCCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGTCTACA 475
                                                                                  

consensus_9019#0      ATCAGTGTGTTCTTCAACCTGTACCTCATGTTC-----CAGCTCGACTCCGGTACCTGGA 765
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      ATCAGTGTGTTCTTCAACCTGTACCTCATGTTC-----CAGCTCGACTCCGGTACCTGGA 532
consensus_9019#3      ATCAGTGTGTTCTTCAACCTGTACCTCATGTTC-----CAGCTCGACTCCGGTACCTGGA 408
consensus_9019#2      GTTA-CGTGAGCATCGGCGAGTTTACTGCCTTCACGATCGGTTGGAATCTGATTCTGGAG 534
                                                                                  

consensus_9019#0      TTCGTT-TCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGC 824
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      TTCGTT-TCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGC 591
consensus_9019#3      TTCGTT-TCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGC 467
consensus_9019#2      TACGTGATCGGCACGTCCAGCGTGGCCCGTGGCATGAGCGGCTACATCGACTCGCTGGTG 594
                                                                                  

consensus_9019#0      CACTCGATAGAGGGCGAGCGGTTACTCACGA--ATGCGGAGCT-TGCCGCCTCCAAGGCG 881
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      CACTCGATAGAGGGCGAGCGGTTACTCACGA--ATGCGGAGCT-TGCCGCCTCCAAGGCG 648
consensus_9019#3      -ACTCGATAGAGGGCGAGCGGTTACTCACGA--ATGCGGAGCT-TGCC------------ 511
consensus_9019#2      GACAACAAAATAAGCAAAGCGATGCGCGAAGCTATGCCGATCGATGTCGACTTCCTGTCG 654
                                                                                  

consensus_9019#0      AACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCCG 941
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      AACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAG 708
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      GACTATCCGGACTTTTTCTCGTTCGTCGTGGTGC-------------------------- 688
                                                                                  

consensus_9019#0      GCAAAATTCCAAGGTGCACCGATGTACGTGATAGCNAACGAATCAACGTANGGGGTTGCG 1001
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      GCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGT 768
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ------------------------------------------------------------
                                                                                  

consensus_9019#0      TTCGTTACT--------------------------------------------------- 1010
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      TCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCAGGATTCCCGCGGGCT 828
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ------------------------------------------------------------
                                                                                  

consensus_9019#0      ------------------------------------------------------------
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      GCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGA 888
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ------------------------------------------------------------
                                                                                  

consensus_9019#0      ------------------------------------------------------------
consensus_9019#4      ------------------------------------------------------------
consensus_9019#1      GCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACT 948
consensus_9019#3      ------------------------------------------------------------
consensus_9019#2      ------------------------------------------------------------
                                                                                  

consensus_9019#0      -----------------------------------------------------------
consensus_9019#4      -----------------------------------------------------------
consensus_9019#1      ACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTACCTCGAGACATTT 1007
consensus_9019#3      -----------------------------------------------------------
consensus_9019#2      -----------------------------------------------------------