cluster # 9034

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Anopheles gambiae
cluster # 9034 cluster # 9034 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9034#0 length = 1187 sequences # 11

consensus_9034#1 length = 705 sequences # 1
consensus_9034#2 length = 686 sequences # 1

consensusID : consensus_9034#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1187
fasta sequence

                              [GTAAA-AGAACAAATAAGAGATTGTAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAAT-GTAAAAGCTTCGAGAATGGATC-TAATTAGTTTCCTTCCTCGGATACGTACACCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAG-TGTGTG-TGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTAATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAAT-G-GTTCCTTTTTTTTGTTTGCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACGGTTGCAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGG-AATTTGCAAGTGCAGGAGGAAGCAGAACATGTAAAACAGGGCAAACAATGAAGCTTCCACTGGCAATGAACTGACATGGAGCTGCGTATTTGTTTTCTCCTTTATTCGCATTCAACGCGCCTTCAATGCAAAGATATACGCAAGGTAAACGCAATCCCTTA-TTGGTGTTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGAAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAATAATGTACTGAGAAGCAAAACAATGCACTGAAAACAATGTAAATCGAAGAGCAAACTTATTAAGTGTACACACCACCACCACCACCACCACCACGACTTTCCCCAAATGACAAGGCTGGCCGAAGGGCTGGACCGCAGATTTGAATTACCAATACACAACCAATACTTATCAATGTTGCCTGCAGTGTGGCGAATAAATGAAATATATTAAATGAAACAA]

[+] EMBL CNS08QFZ             [GTAAATAGAACAAATAAGAGATTGTAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAAT GTAAAAGCTTCGAGAATGGATCTTAATTAGTTTCCTTCCTCGGATACGTACACCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAGTTGTGTGTTGAAAGGATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08FHO             [    a gaAACAAATAAGAGATTGTAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAATGGTAAAAGCTTCGAGAATGGATC TAATTAGTTTCCTTCCTCGGATACGTACACCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAG TGTGTG TGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08F0F             [         ACAAATAAGAGATTGTAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAAT GTAAAAGCTTCGAGAATGGATC TAATTAGTTTCCTTCCTCGGATACGTACACCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAG TGTGTG TGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTAATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAAT G GTTCCTTTTTTTTGTTTGCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACGGTTGCAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGG AATTTGCAAGTGCAGGAGGAAGCAGTTTATGTAAAACAGGGCAAACAATGAAGCTTCCACTGGCAATGAACTGACATGGAGCTGCGTATTTGTTTTCTCCTTTATTCGCATTCAACGCGCCTTCAATGCAAAGATATACGCAAGGTAAACGCAATCCCTTATTTGGTGTTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGAAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAATAATGTACTGAGAAGCAA                                                                                                                                                                                                          ]
[+] EMBL CNS08K2U             [                      TGTAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAAT GTAAAAGCTTCGAGAATGGATC TAATTAGTTTCCTTCCTCGGATACGTACACCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAG TGTGTG TGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTAATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAAT G GTTCCTTTTTTTTGTTTGCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08P5O             [                                                                                                                                                                                                               TCCTCGGATACGTAC CCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAG TGTGTG TGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTAATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAAT G GTTCCTTTTTTTTGTTTGCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACGGTTGCAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGG AATTTGCAAGTGCAGGAGGAAGCAGAACATGTAAAACAGGGCAAACAATGAAGCTTACACTGGCAATGAACT                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08F0G             [                                                                                                                                                                                                                   CGGATACGTACACCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAG TGTGTG TGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCCGGATAGTTTATAATTATAAAAAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTAATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAAT G GTTCCTTTTTTTTGTTTGCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCTAATAAAACGGTTGCAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGG AATTTGCAAGTGCAGGAGGAAGCAGAACATGTAAAACAGGGCAAACAATGAAGCTTCCACTGGCAATGAACTGACATGGAGCTGCGTATTTGTTTTCTCCTTTATTCGCATTCAACGCGCCTTCAATGCAAAGATATACGCAAGGTAAACGCAATCCCTTA TTGGTGTTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGAAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAATAATGTACTGAGAAGCAAAACAATGCACTGAAAACAATGTAAATCGAAGAGCAAACTTATTAAGTGTACACACCACCACCACCACCACCACCACGACTTTCCCCAAATGACAAGGCTGGCCGAAGGGCTGGACCGCAGATTTGAATTACCAATACACAACCAATACTTATCAATGTTGCCTGCAGTGTGGCGAATAAATGAAATTTA             ]
[+] EMBL BX617850             [                                                                                                                                                                                                                                   GTTTTGTGATGATCCGTTC    ATGTGT  G TGTGTG TGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCAATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGGTAGGG    GAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTGATGCTTCTCAAATTCGTCACCGCCCTTCCCCTTCAAAACGTTTGCCTTAAT G GTTCCTTTTTTTTGTTTGCATTTGCAAAACGAATGCTCCATGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACGGTTGGAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGGAAAATTGC AGTGCAGGAGGAAGCAGAACATGTAAAACAGGGCAAACAATGAAGCTTCCACTGGCAATGAACTGACATGGAGCTGCGTATTTGTTTTCTCCTTTATTCGC                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS08P5P             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTAATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAATGG GTTCCTTTTTTTTTTTTGCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACGGTTGCAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGG AATTTGCAAGTGCAGGAGGAAGCAGAACATGTAAAACAGGGCAAACAATGAAGCTTCCACTGGCAATGAACTGACATGGAGCTGCGTATTTGTTTTCTCCTTTATTCGCATTCAACGCGCCTTCAATGCAAAGATATACGCAAGGTAAACGCAATCCCTTA TTGGTGTTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGAAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAcc                                                                                                                                                                                                                           ]
[-] EMBL CNS08K2V             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAAT GTGTTCCTTTTTTTTGTTTGCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACGGTTGCAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGG AATTTGCAAGTGCAGGAGGAAGCAGAACATGTAAAACAGGGCAAACAATGAAGCTTCCACTGGCAATGAACTGACATGGAGCTGCGTATTTGTTTTCTCCTTTATTCGCATTCAACGCGCCTTCAATGCAAAGATATACGCAAGGTAAACGCAATCCCTTA TTGGTGTTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGGAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAATAATGTACTGAGAAGCAAAACAATGCACTGAAAACAATGTAAATCGAAGAGCAAACTTATTAAGTGTACACACCACCACCACCACCACCACCACGACTTTCCCCAAATGACAAGGCTGGCCGAAGGGCTGGACCGCAGATTTGAATTACCAATACACAACCAATACTTATCAATGTTGCCTGCAGTG                                 ]
[-] EMBL CNS08QG0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGTAAACGCAATCCCTTA ATGGTGTTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGAAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAATAATGTACTGAGAAGCAAAACAATGCACTGAAAACAATGTAAATCGAAGAGCAAACTTATTAAGTGTACACACCACCACCACCACCACCACCACGACTTTCCCCAAATGACAAGGCTGGCCGAAGGGCTGGACCGCAGATTTGAATTACCAATACACAACCAATACTTATCAATGTTGCCTGCAGTGTGGCGAATAAATGAAATATTTTAAATGAAACAA]
[-] EMBL CNS08FHP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCCTTA TTGGTGTTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGAAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAATAATGTACTGAGAAGCAAAACAATGCACTGAAAACAATGTAAATCGAAGAGCAAACTTATTAAGTGTACACACCACCACCACCACCACCACCACGACTTTCCCCAAATGACAAGGCTGGCCGAAGGGCTGGACCGCAGATTTGAATTACCAATACACAACCAATACTTATCAATGTTGCCTGCAGTGTGGCGAATAAATGAAATA               ]




>consensus_9034#0
GTAAAAGAACAAATAAGAGATTGTAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGAC
ATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAG
GAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAATGTAAAAGCTTC
GAGAATGGATCTAATTAGTTTCCTTCCTCGGATACGTACACCCCGTTTTGTGATGATCCG
TTCATGTATGTGTGAGTGTGTGTGAAAGGATAATTGCGTGTGCATGTGTGTGTGTGCGTT
TAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGA
TAGGGGAGAGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACC
CCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCA
GATTTTGTTGCAAATCTGTCTAATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAA
CGTTTGCCTTAATGGTTCCTTTTTTTTGTTTGCATTTGCCAAACGAATGCTCCAGGACAG
GGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACGGTTGCAAAACAGTGCAAAAGTA
GCGTCGTCGTGCACAGGACCTAAAGAACCGAAAGGTTGCAAAGGAATTTGCAAGTGCAGG
AGGAAGCAGAACATGTAAAACAGGGCAAACAATGAAGCTTCCACTGGCAATGAACTGACA
TGGAGCTGCGTATTTGTTTTCTCCTTTATTCGCATTCAACGCGCCTTCAATGCAAAGATA
TACGCAAGGTAAACGCAATCCCTTATTGGTGTTTTATTGGTGTGAGAGGAGACACAAAAC
AAACGAGCTCAGAATGAAGTGAAAGCGACTTTTTCCTTCTAAATCAGAAGAACGAAGGAA
AAATAAATAATGTACTGAGAAGCAAAACAATGCACTGAAAACAATGTAAATCGAAGAGCA
AACTTATTAAGTGTACACACCACCACCACCACCACCACCACGACTTTCCCCAAATGACAA
GGCTGGCCGAAGGGCTGGACCGCAGATTTGAATTACCAATACACAACCAATACTTATCAA
TGTTGCCTGCAGTGTGGCGAATAAATGAAATATATTAAATGAAACAA

consensusID : consensus_9034#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 705
fasta sequence

                              [GAGAAATAAGATGGAGTATTAGTTGCACCAAGAAAAAAACCCCCCAGAAGAGTAGTTAAACGCATTGTTCACAGGACAGAAACACTTACCATACACCTTTTTCCCCTCCGGTTGATGAAATCTCGCTCCACGGAAGTGAAATGTTTGTATTTAATGGTTTCCTTCAGATGTTTCACGCATAAATGTGCTACATTGCAAATATTGATATTGTTGAGATTGATCGATTGTTTAGAGTTTTTGAGGCACATTGCGGGCGGCTCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAAGGAGAAGCGGATGTAGCGGAAATGTAAAATAGAAACAAATAAGAGATTGCAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAATTTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTCGGATTTCGTACACCCCGTTTTGTGATGATCCGTTCATGTGTGTGTGAGTGTGTGTGAAAGGATAATTGCGTGTGCATGTGTGCGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM621091             [GAGAAATAAGATGGAGTATTAGTTGCACCAAGAAAAAAACCCCCCAGAAGAGTAGTTAAACGCATTGTTCACAGGACAGAAACACTTACCATACACCTTTTTCCCCTCCGGTTGATGAAATCTCGCTCCACGGAAGTGAAATGTTTGTATTTAATGGTTTCCTTCAGATGTTTCACGCATAAATGTGCTACATTGCAAATATTGATATTGTTGAGATTGATCGATTGTTTAGAGTTTTTGAGGCACATTGCGGGCGGCTCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAAGGAGAAGCGGATGTAGCGGAAATGTAAAATAGAAACAAATAAGAGATTGCAAACGCATAGAGAGGGCGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAATTTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTCGGATTTCGTACACCCCGTTTTGTGATGATCCGTTCATGTGTGTGTGAGTGTGTGTGAAAGGATAATTGCGTGTGCATGTGTGCGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGCGGACGCGTGGGCGGACGCGTGGGCGG]




>consensus_9034#1
GAGAAATAAGATGGAGTATTAGTTGCACCAAGAAAAAAACCCCCCAGAAGAGTAGTTAAA
CGCATTGTTCACAGGACAGAAACACTTACCATACACCTTTTTCCCCTCCGGTTGATGAAA
TCTCGCTCCACGGAAGTGAAATGTTTGTATTTAATGGTTTCCTTCAGATGTTTCACGCAT
AAATGTGCTACATTGCAAATATTGATATTGTTGAGATTGATCGATTGTTTAGAGTTTTTG
AGGCACATTGCGGGCGGCTCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAAGGAGAA
GCGGATGTAGCGGAAATGTAAAATAGAAACAAATAAGAGATTGCAAACGCATAGAGAGGG
CGTTGTGGAGAGTAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGA
ATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTT
TATGTAAATTTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTCGGATTTCGTAC
ACCCCGTTTTGTGATGATCCGTTCATGTGTGTGTGAGTGTGTGTGAAAGGATAATTGCGT
GTGCATGTGTGCGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCA
TTCAAAAGAAGCGATCGGCGGACGCGTGGGCGGACGCGTGGGCGG

consensusID : consensus_9034#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 686
fasta sequence

                              [CCGCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAGTGAGAAGCGGGTGTAGCGAAAATGTAAAGTAGAAACAAATAAGAGACGGCAAACACACAGAAAGGGCGTTGTGGAGAGAAGACGAGTGAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAATGTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTTCGGATACGTACACCCCTTTTTGTGATGATCCGTTCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTGATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAATGGTTCCTTTTTTTTTTTTGCATTTGCAAAACGAATGCTCCAGAACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACAGTGCAGAAAGTAGCGTCGT]

[+] EMBL BM620248             [CCGCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAGTGAGAAGCGGGTGTAGCGAAAATGTAAAGTAGAAACAAATAAGAGACGGCAAACACACAGAAAGGGCGTTGTGGAGAGAAGACGAGTGAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAATGTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTTCGGATACGTACACCCCTTTTTGTGATGATCCGTTCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGCGAGAGAAGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATAGCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTGATGCTTCTCAAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAATGGTTCCTTTTTTTTTTTTGCATTTGCAAAACGAATGCTCCAGAACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAATAAAACAGTGCAGAAAGTAGCGTCGT]




>consensus_9034#2
CCGCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAGTGAGAAGCGGGTGTAGCGAAAA
TGTAAAGTAGAAACAAATAAGAGACGGCAAACACACAGAAAGGGCGTTGTGGAGAGAAGA
CGAGTGAAGGACATATTTAGTCAAATACTAATGAGAAAGACACCGAACAGGAATAGGAAA
ACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTTGTGATCTTTATGTAAA
TGTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTTCGGATACGTACACCCCTTT
TTGTGATGATCCGTTCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAAT
ATTGCTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGCGAGAGA
AGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATA
GCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTGATGCTTCTC
AAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAATGGTTCCTTTTTTTTTTTT
GCATTTGCAAAACGAATGCTCCAGAACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAA
TAAAACAGTGCAGAAAGTAGCGTCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9034#0      ------------------------------------------------------------
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      GAGAAATAAGATGGAGTATTAGTTGCACCAAGAAAAAAACCCCCCAGAAGAGTAGTTAAA 60
                                                                                  

consensus_9034#0      ------------------------------------------------------------
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      CGCATTGTTCACAGGACAGAAACACTTACCATACACCTTTTTCCCCTCCGGTTGATGAAA 120
                                                                                  

consensus_9034#0      ------------------------------------------------------------
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      TCTCGCTCCACGGAAGTGAAATGTTTGTATTTAATGGTTTCCTTCAGATGTTTCACGCAT 180
                                                                                  

consensus_9034#0      ------------------------------------------------------------
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      AAATGTGCTACATTGCAAATATTGATATTGTTGAGATTGATCGATTGTTTAGAGTTTTTG 240
                                                                                  

consensus_9034#0      ------------------------------------------------------------
consensus_9034#2      ----------------CCGCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAGTGAGAA 44
consensus_9034#1      AGGCACATTGCGGGCGGCTCTGCGATCGGGTGGTGAGGGCGGATATTTATGAAAGGAGAA 300
                                                                                  

consensus_9034#0      -----------------GTAAAA---GAACAAATAAGAGATTGTAAACGCATAGAGAGGG 40
consensus_9034#2      GCGGGTGTAGCGAAAATGTAAAGTAGAAACAAATAAGAGACGGCAAACACACAGAAAGGG 104
consensus_9034#1      GCGGATGTAGCGGAAATGTAAAATAGAAACAAATAAGAGATTGCAAACGCATAGAGAGGG 360
                                       *****     *************  * **** ** *** ****

consensus_9034#0      CGTTGTGGAGAG--------TAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACC 92
consensus_9034#2      CGTTGTGGAGAGAAGACGAGTGAAGGACATATTTAGTCAAATACTAATGAGAAAGACACC 164
consensus_9034#1      CGTTGTGGAGAG--------TAAAGGACATATTTAGTCAAATACTAATGAGAAAGACACC 412
                      ************        * **************************************

consensus_9034#0      GAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTT 152
consensus_9034#2      GAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTT 224
consensus_9034#1      GAACAGGAATAGGAAAACAGGAAAACAGGAGAGCGGGAAAATTAAGAGAATATTGTTTTT 472
                      ************************************************************

consensus_9034#0      GTGATCTTTATGTAAATGTAAAAGCTTCGAGAATGGATCTAATTAGTTTCCTTCCT-CGG 211
consensus_9034#2      GTGATCTTTATGTAAATGTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTTCGG 284
consensus_9034#1      GTGATCTTTATGTAAATTTAAAAGCTTCGAGAGTGGATCTAATCAGTTTCCTTCCTCGGA 532
                      ***************** ************** ********** ************  * 

consensus_9034#0      ATACGTACACCCCGTTTTGTGATGATCCGTTCATGTATGTGTGAGTGTGTGTGAAAGGAT 271
consensus_9034#2      ATACGTACACCCCTTTTTGTGATGATCCGTTCATGT------------------------ 320
consensus_9034#1      TTTCGTACACCCCGTTTTGTGATGATCCGTTCATGTGTGTGTGAGTGTGTGTGAAAGGAT 592
                       * ********** **********************                        

consensus_9034#0      AATTGCGTGTGCATGTGTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTG 331
consensus_9034#2      ----------------GTGTGTGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTG 364
consensus_9034#1      AATTGCGTGTGCAT--GTGTGCGTGCGTTTAATTTGTATAATTTCCTATTGTAAATATTG 650
                                      ***** **************************************

consensus_9034#0      CTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGAGAGAGCGAGAGA 391
consensus_9034#2      CTTTGTTTCATTCAAAAGAAGCGATCGGATAGGGGAGAGAGAGAGAGA----GCGAGAGA 420
consensus_9034#1      CTTTGTTTCATTCAAAAGAAGCGATCGG-CGGACGCGTGGGCGGACGCGTGGGCGG---- 705
                      ****************************   *  * * * * *   *     ***     

consensus_9034#0      AGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATA 451
consensus_9034#2      AGATGAAAAAGCGAAAACACACGCAAACCCCAGGATAGTTTATAATTATAACCAGATATA 480
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      GCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTAATGCTTCTC 511
consensus_9034#2      GCAACACAATCTTGTTGTAGCTTGTAGCAGATTTTGTTGCAAATCTGTCTGATGCTTCTC 540
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      AAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAATGGTTCCTTTTTTTTGTTT 571
consensus_9034#2      AAATTCGTCACCGCCCCTCCCCTTCAAAACGTTTGCCTTAATGGTTCCTTTTTTTTTTTT 600
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      GCATTTGCCAAACGAATGCTCCAGGACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAA 631
consensus_9034#2      GCATTTGCAAAACGAATGCTCCAGAACAGGGCAGGTATGCTTCTAAGCGTCTAAGGCAAA 660
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      TAAAACGGTTGCAAAACAGTGCAAAAGTAGCGTCGTCGTGCACAGGACCTAAAGAACCGA 691
consensus_9034#2      TAAAACAGT------GCAG----AAAGTAGCGTCGT------------------------ 686
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      AAGGTTGCAAAGGAATTTGCAAGTGCAGGAGGAAGCAGAACATGTAAAACAGGGCAAACA 751
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      ATGAAGCTTCCACTGGCAATGAACTGACATGGAGCTGCGTATTTGTTTTCTCCTTTATTC 811
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      GCATTCAACGCGCCTTCAATGCAAAGATATACGCAAGGTAAACGCAATCCCTTATTGGTG 871
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      TTTTATTGGTGTGAGAGGAGACACAAAACAAACGAGCTCAGAATGAAGTGAAAGCGACTT 931
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      TTTCCTTCTAAATCAGAAGAACGAAGGAAAAATAAATAATGTACTGAGAAGCAAAACAAT 991
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      GCACTGAAAACAATGTAAATCGAAGAGCAAACTTATTAAGTGTACACACCACCACCACCA 1051
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      CCACCACCACGACTTTCCCCAAATGACAAGGCTGGCCGAAGGGCTGGACCGCAGATTTGA 1111
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      ATTACCAATACACAACCAATACTTATCAATGTTGCCTGCAGTGTGGCGAATAAATGAAAT 1171
consensus_9034#2      ------------------------------------------------------------
consensus_9034#1      ------------------------------------------------------------
                                                                                  

consensus_9034#0      ATATTAAATGAAACAA 1187
consensus_9034#2      ----------------
consensus_9034#1      ----------------