cluster # 9035

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Anopheles gambiae
cluster # 9035 cluster # 9035 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9035#0 length = 1021 sequences # 3
consensus_9035#1 length = 1014 sequences # 8

consensus_9035#2 length = 624 sequences # 1
consensus_9035#3 length = 593 sequences # 1

consensusID : consensus_9035#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1021
fasta sequence

                              [TGGAAAAAAAAAAAAAAAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAACACCATCAACACCACGTGC-GTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAG-ACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCC]

[+] EMBL CNS09FBV             [TGGAAAAAAAAAAAAAAAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAACACCATCAACACCACGTGCGGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGCACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTAC GTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACGAAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09658             [                AAAACAAACAAAAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAACACCATCAACACCACGTGC GTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAG ACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCC]
[+] EMBL CNS0999E             [                           CAACGCTTGCTACAGCTCCGTACGG TTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGC GTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAG ACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAAGAACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCAAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTAGCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACCTTAACCCTCACACACCTACACTTTTACATTGCTAGACGTGATTTTTATC                                                                                                   ]




>consensus_9035#0
TGGAAAAAAAAAAAAAAAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTC
CGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTT
CAACACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGG
ACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCC
TGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCAC
TGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGAT
CGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAAC
CGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACG
AAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTG
AAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTG
GACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACC
AGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCG
TGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTC
GTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGC
AAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTAC
ATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAA
ATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCC
C

consensusID : consensus_9035#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1014
fasta sequence

                              [CCGATTTGCAGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG-TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG-AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC-GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAAAAAAAAAAAAAAGGCCACATGT]

[+] EMBL BM611731             [CCGATTTGCAGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTT                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM614857             [       ccgGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGG TTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTT                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08TD6             [        actggaAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAA GGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTTACACCCACAACGAAGAGATCGGATCGATCGAACTACCGTTTTTGACTGCGACCGATA GGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAAAAAAAAAAAAAAGGCCACATGT]
[+] EMBL BX625055             [                           CGCTTGCTACAGCTCCGTACGG TTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCAAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGANGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTAT                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS08TD7             [                                  TACAGCTCCGTACGGTTTTTTTCCGAACCATAACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACAACGTGCGTACCACCGCCATGAACGTTTCTATCGAACGGAAGCGAACTGATTGTGCAGTTCTGCCGAAGGGCTGGCAGCGCGAAAAGGTGCTCCGAAAAACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACAACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGAAAAAACGAACTACCG AAGCAACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTTACTGAACAAACGGCCTCGAAAACGTCGCTCAAAACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAAAACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAA                      ]
[+] EMBL BM595611             [                                                 ccgTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTCTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCG                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS0999F             [                                                                                                                                  ACAACGTGCGTACCACCGCCATGAACGTGTCTATCGAACGGAAGCGGACTGATTGTGCAGTTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAAACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACAACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAAAACCCACAACGAAGAGATCGGATCGATCGGACTACCG AAGCAACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGGAGTCGCTAGCAACTGCCCTACACCACAACACACTTCCCGTAACTGAACAAACGGCCTCAAAAACGTCGCTCAAAACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTAGCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCCACATGCTCGGTGCTTTGTCCACCTTAACCCTCACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAAT                                                          ]
[-] EMBL CNS09FBW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGGTGCTGCAGTCGCTAGCAACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAAAACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAAAACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAA              ]




>consensus_9035#1
CCGATTTGCAGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGA
ACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAA
TACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACT
GATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTG
TCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTG
ATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCG
CAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCG
AAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAA
GAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAA
ACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGA
CAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAG
CCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCGTG
CAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGT
AGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAA
ACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACAT
TGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAAT
ACAAATATTGTACGACTTTCTTTTAAAAAAAAAAAAAAAAAAAAGGCCACATGT

consensusID : consensus_9035#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 624
fasta sequence

                              [CAAACAGTAGTAGTGCACTGCGCCGGAAGTTTCCACCGTCAGTACCGCTCGGCGGAAGCAACTCCCTCACCGCTACACCAATAAGCGCTGGGTGTGGTGTGAAGCCTTCATCTCAGTTCGATTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCTAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCCGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTG]

[+] EMBL BX617758             [CAAACAGTAGTAGTGCACTGCGCCGGAAGTTTCCACCGTCAGTACCGCTCGGCGGAAGCAACTCCCTCACCGCTACACCAATAAGCGCTGGGTGTGGTGTGAAGCCTTCATCTCAGTTCGATTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCTAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCCGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTG]




>consensus_9035#2
CAAACAGTAGTAGTGCACTGCGCCGGAAGTTTCCACCGTCAGTACCGCTCGGCGGAAGCA
ACTCCCTCACCGCTACACCAATAAGCGCTGGGTGTGGTGTGAAGCCTTCATCTCAGTTCG
ATTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCAT
CGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAA
AGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTT
TAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGA
AGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCA
CTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCTAAAACGTCGCTCA
ACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCA
CGGAGGAGGACGTTAAGCCGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGG
AGGCGTTGCGTGCCTAAGATCCTG

consensusID : consensus_9035#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 593
fasta sequence

                              [AGAATNGCCCCAGGGTTAACTACAGCTCGTACGGTTTCCTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAACGCAGCCGTCGGGAGAAACGTAGAGAATCTCGGAGCCAGTAACACCCACAACGAACGCAGATCGGATCGATCGAACTACCGAAGCGACTAGCGACCGATAGGAGACCGGGTATACGTAGAAACAGACAGGTAGCTGCAGANCGCTAGCCCACTGCCTACANCCACAACACACTTCCCGACGACTGGA]

[+] EMBL AL693501             [AGAATNGCCCCAGGGTTAACTACAGCTCGTACGGTTTCCTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAACGCAGCCGTCGGGAGAAACGTAGAGAATCTCGGAGCCAGTAACACCCACAACGAACGCAGATCGGATCGATCGAACTACCGAAGCGACTAGCGACCGATAGGAGACCGGGTATACGTAGAAACAGACAGGTAGCTGCAGANCGCTAGCCCACTGCCTACANCCACAACACACTTCCCGACGACTGGA]




>consensus_9035#3
AGAATNGCCCCAGGGTTAACTACAGCTCGTACGGTTTCCTCCGAACCATTACGGCTGTTA
GAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACG
TGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGC
CGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGG
ATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGAC
AAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATG
CCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAACGCAGCCGTCGGGA
GAAACGTAGAGAATCTCGGAGCCAGTAACACCCACAACGAACGCAGATCGGATCGATCGA
ACTACCGAAGCGACTAGCGACCGATAGGAGACCGGGTATACGTAGAAACAGACAGGTAGC
TGCAGANCGCTAGCCCACTGCCTACANCCACAACACACTTCCCGACGACTGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9035#1      ---CCGATTTGCAGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTC 57
consensus_9035#3      -----------------AGAATNGCCCCAGGGTTAACTACAGCTC-GTACGGTTTCCT-C 41
consensus_9035#0      TGGAAAAAAAAAAAAAAAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTC 60
consensus_9035#2      ------------------------------------------------------------
                                                                                  

consensus_9035#1      CGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTT 117
consensus_9035#3      CGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTT 101
consensus_9035#0      CGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTT 120
consensus_9035#2      ------------------------------------------------------------
                                                                                  

consensus_9035#1      CAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGG 177
consensus_9035#3      CAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGG 161
consensus_9035#0      CAACACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGG 180
consensus_9035#2      --------CAAACAGTAGTAGTG---CACTGCGCCGGAAGTTTCCACCGT-CAGTACCGC 48
                                ****  *   * *   *** **   * * ** ** * **  * * * ** 

consensus_9035#1      ACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGC 237
consensus_9035#3      ACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGC 221
consensus_9035#0      ACTGATTGTGCAGCTCTGCCGAAGG-CTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGC 239
consensus_9035#2      TCGGCGGAAGCAACTCCCTCA------CCGCTACACCAATAAGCGCT---------GGGT 93
                       * *     *** ***   *         **  * * ** * * ***         *** 

consensus_9035#1      CTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCA 297
consensus_9035#3      CTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCA 281
consensus_9035#0      CTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCA 299
consensus_9035#2      GTGG-TGTGAAGCCTTCATCTCAGTTCGATTACAGCCGTGCAATGCGATCGGACACCTCA 152
                       **  ** *  *        *  ** * * ******************************

consensus_9035#1      CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 357
consensus_9035#3      CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 341
consensus_9035#0      CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 359
consensus_9035#2      CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 212
                      ************************************************************

consensus_9035#1      TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 417
consensus_9035#3      TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 401
consensus_9035#0      TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 419
consensus_9035#2      TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 272
                      ************************************************************

consensus_9035#1      CCGAA-GCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAA 476
consensus_9035#3      CCGAACGCAGCCGTC--GGGAGAAACGT--AGAGAATCTCGGAGCCAGTAACACCCACAA 457
consensus_9035#0      CCGAA-GCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAA 478
consensus_9035#2      CCGAA-GCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAA 331
                      ***** ****  **   ***********  ******************************

consensus_9035#1      CGAAG--AGATCGGATCGATCGAACTACCGAAGCGACT-GCGACCGATAGG--GCCGGGT 531
consensus_9035#3      CGAACGCAGATCGGATCGATCGAACTACCGAAGCGACTAGCGACCGATAGGAGACCGGGT 517
consensus_9035#0      CGAAG--AGATCGGATCGATCGAACTACCGAAGCGACT-GCGACCGATAGG--GCCGGGT 533
consensus_9035#2      CGAAG--AGATCGGATCGATCGAACTACCGAAGCGACT-GCGACCGATAGG--GCCGGGT 386
                      ****   ******************************* ************   ******

consensus_9035#1      ATACGT-GAAAC-GACGGT--GCTGCAG-TCGCTAGCC-ACTGCCCTACACCACAACACA 585
consensus_9035#3      ATACGTAGAAACAGACAGGTAGCTGCAGANCGCTAGCCCACTGCCTACANCCACAACACA 577
consensus_9035#0      ATACGT-GAAAC-GACGGT--GCTGCAG-TCGCTAGCC-ACTGCCCTACACCACAACACA 587
consensus_9035#2      ATACGT-GAAAC-GACGGT--GCTGCAG-TCGCTAGCC-ACTGCCCTACACCACAACACA 440
                      ****** ***** *** *   *******  ******** ******     **********

consensus_9035#1      CTTCCCG-TGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTT 644
consensus_9035#3      CTTCCCGACGACTGGA-------------------------------------------- 593
consensus_9035#0      CTTCCCG-TGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTT 646
consensus_9035#2      CTTCCCG-TGACTGGACAGACGGCCTCTAAAACGTCGCTCAACACTAACGCCGGCGTGTT 499
                      *******  *******                                            

consensus_9035#1      CACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCG 704
consensus_9035#3      ------------------------------------------------------------
consensus_9035#0      CACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCG 706
consensus_9035#2      CACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCC 559
                                                                                  

consensus_9035#1      GCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGA 764
consensus_9035#3      ------------------------------------------------------------
consensus_9035#0      GCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGA 766
consensus_9035#2      GCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGA 619
                                                                                  

consensus_9035#1      TCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATC 824
consensus_9035#3      ------------------------------------------------------------
consensus_9035#0      TCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATC 826
consensus_9035#2      TCCTG------------------------------------------------------- 624
                                                                                  

consensus_9035#1      TGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACAC 884
consensus_9035#3      ------------------------------------------------------------
consensus_9035#0      TGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACAC 886
consensus_9035#2      ------------------------------------------------------------
                                                                                  

consensus_9035#1      ACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATG 944
consensus_9035#3      ------------------------------------------------------------
consensus_9035#0      ACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATG 946
consensus_9035#2      ------------------------------------------------------------
                                                                                  

consensus_9035#1      CAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAAAAAAAAAAAAAA 1004
consensus_9035#3      ------------------------------------------------------------
consensus_9035#0      CAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAAAAAA 1006
consensus_9035#2      ------------------------------------------------------------
                                                                                  

consensus_9035#1      GGCCACATGT----- 1014
consensus_9035#3      ---------------
consensus_9035#0      AAAAAAAAAGGGCCC 1021
consensus_9035#2      ---------------