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Anopheles gambiae
cluster # 9068 cluster # 9068       Sequences # 14       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9068#0 length = 2112 sequences # 10  
 consensus_9068#1 length = 498 sequences # 1  
consensus_9068#2 length = 382 sequences # 3  
consensusID : consensus_9068#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2112
fasta sequence 
                              [GCGTGCTCGGCAACTGCTGGCTGCTGAGCGCGCTGGCCGTGCTGGCGGAGCGGGAGGACTTGGTGAAGGAGGTGCTGCTGACGAAGGAGATCTGCCCGCAGTGCGCGTACCAGGTGAAGCTGTGTAAGGACGCCCGCTGGACGACGGTGCTGGTGGACGATCTGCTGCCGTGCGACAAGCGCGGTCACCTCGTCTACTCCCAGGCGAAGCGGAAACAGCTCTGGGTGCCGCTGATCGAGAAGGCGGTCGCGAAGATACACGGCTGCTACGAGGCGCTCGTGTCGGGCCGGGCGATCGAGGGCCTCGCCACGCTGACCGGCGCACCGTGCGAAAGCATTCCACTGCAGGCCAGCTCATTGCCACTGCCGAGCGAGGACGATCTCGACCGCGACCTGATCTGGGCCCAGCTGCTCAGCTCCCGGCTGGTAAAGTTCCTGATGGGGGCGAGCT-CGGCGGCGGCAACATGAAGGTGGACGAGGACGAGTACCAGCGGAAGGGACTGCGGCCGCGCCACGCTTACTCCGTGCTGGACGTGCGGGACATCAAGGGGCACCGGCTGCTCAAGCTGCGCAACCCGTGGGGACACTTTTCCTGGCAAGGCGACTGGTCGGATGATTCCGAGCTGTGGACGGACGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTGCATCGACATCTGCAAGGTGCGCTCGGAATGGAACGAGGTGCGCCTGTTTGGCACGCTGCAACCACTCCGCGCGTTGTCCTGCGTGCTCATAACCGTGCTCGAACCGACCGAGGCCGAGTTCACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAGCTAGACCTGTGTGTGGTGCTGTTCCGGACGCGAAACCCCGCCAACCCTGAGGTGGGCCGACTGGTCGAGCACAGCAAGCGGCAGGTTCGTGGATTCGTCGGCTGCCCAAGATGCTGGAAACGGACCTGTACATGCTGGTATGTCTCGCCTTCAACCACTGGCACACGGGAATTGACGACTTCATGCACTA-CCCGCAGTGCGTGCTGGCGATCCACAGCTCCAAGCGGCTGCTGGTCGAGCAGATCACGCCGCCCCCATTCCTGCTGGCCGACGCCATCATCAACCTGACGCTGCCCAAGGGGCAGCGGCACGAGGGCCGGGAAGGCATGACCGCGTACTACCTGACGAAGGGATGGGCGGGACTGGTCGTGATGGTGGAAAATCGGCACGAAAACAAGTGGATACACGTCAAGTGTGATTGCCAGGAAAGCTACAACGTCGTCTCGACGCGAGGCGAGCTGAAGACGGTCGATTCCGTTCCACCGCTGCAGCGACAGGTGATCATCGTGCTGACGCAGCTGGAAGGCAGCGGCGGCTTCAGCATAGCCCATCGCCTAACGCATCGGCTGGCCAACTCGGGCGGCCTGCACGACTGGGGACCGCCCTCCTCCACCCACTATCCGCCGATCGAGAACGTGTCCGAGCTGCATTCGCCCCGCATGATAACCTAGAGCGCGACGGGCGGGAAGACCGTGTGGGAGACCGTGCACGAGCAGGGGCGAGCACGGTTGCGAGCTGTGATGGTGTTTTTTCCTCCCCCGTCGACAAACCGCCACACGGAAACGATATTCCAACTAGAAACGGCCCCCTCCCCCCACCCTGCCTCCTTTCCCGTGAACTTGTTGGCCATATTTATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCTAAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCGGATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTGTGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACTCTCAAATATTCATTGATCTGATATTGATAAAATAAAAAAAAAAAACAAAATCTCCATAGCCCACAAGACACACTTCACCAG]

[-] EMBL AGA280696            [GCGTGCTCGGCAACTGCTGGCTGCTGAGCGCGCTGGCCGTGCTGGCGGAGCGGGAGGACTTGGTGAAGGAGGTGCTGCTGACGAAGGAGATCTGCCCGCAGTGCGCGTACCAGGTGAAGCTGTGTAAGGACGCCCGCTGGACGACGGTGCTGGTGGACGATCTGCTGCCGTGCGACAAGCGCGGTCACCTCGTCTACTCCCAGGCGAAGCGGAAACAGCTCTGGGTGCCGCTGATCGAGAAGGCGGTCGCGAAGATACACGGCTGCTACGAGGCGCTCGTGTCGGGCCGGGCGATCGAGGGCCTCGCCACGCTGACCGGCGCACCGTGCGAAAGCATTCCACTGCAGGCCAGCTCATTGCCACTGCCGAGCGAGGACGATCTCGACCGCGACCTGATCTGGGCCCAGCTGCTCAGCTCCCGGCTGGTAAAGTTCCTGATGGGGGCGAGCTGCGGCGGCGGCAACATGAAGGTGGACGAGGACGAGTACCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AGA284296            [                                                                                                                                                                                                                                                                          TACGAGGCGCTCGTGTCGGGCCGGGCGATCGAGGGCCTCGCCACGCTGACCGGCGCACCGTGCGAAAGCATTCCACTGCAGGCCAGCTCATTGCCACTGCCGAGCGAGGACGATCTCGACCGCGACCTGATCTGGGCCCAGCTGCTCAGCTCCCGGCTGGTAAAGTTCCTGATGGGGGCGAGCTGCGGCGGCGGCAACATGAAGGTGGACGAGGACGAGTACCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX609831             [                                                                                                                                                                                                                                                                                                                                                                                                      ACCTGATCTGGGCCCAGCTGCTCAGCTCCCGGCTGGTAAAGTTCCTGATGGGGGCGAGCT CGGCGGCGGCAACATGAAGGTGGACGAGGACGAGTACCAGCGGAAGGGACTGCGGCCGCGCCACGCTTACTCCGTGCTGGACGTGCGGGACATCAAGGGGCACCGGCTGCTCAAGCTGCGCAACCCGTGGGGACACTTTTCCTGGCAAGGCGACTGGTCGGATGATTCCGAGCTGTGGACGGACGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTGCATCGACATCTGCAAGGTGCGCTCGGAATGGAACGAGGTGCGCCTGTTTGGCACGCTGCAACCACTCCGCGCGTTGTCCTGCGTGCTCATAACCGTGCTCGAACCGACCGAGGCCGAGTTCACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAGCTAGACCTGTGTGTGGTGCTGTTCCGGACGCGAAACCCCGCCAACCCTGAGGTGGGCCGACTGGTCGAGCACAGCAAGCGGCAGGTTCGTGGATTCGTCGGCTGCCCAAGATGCTGGAAACGGACCTGTACATGCTGGTATGTCTCGCCTTCAACCACTGGCACACGGGAATTGACGACTTCATGCACTACCCCGCAGTGCGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AGA283537            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTCCGTGCTGGACGTGCGGGACATCAAGGGGCACCGGCTGCTCAAGCTGCGCAACCCGTGGGGACACTTTTCCTGGCAAGGCGACTGGTCGGATGATTCCGAGCTGTGGACGGACGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTGCATCGACATCTGCAAGGTGCGCTCGGAATGGAACGAGGTGCGCCTGTTTGGCACGCTGCAACCACTCCGCGCGTTGTCCTGCGTGCTCATAACCGTGCTCGAACCGACCGAGGCCGAGTTCACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAGCTAGACCTGTGTGTGGTGCTGTTCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AGA280256            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTCCGTGCTGGACGTGCGGGACATCAAGGGGCACCGGCTGCTCAAGCTGCGCAACCCGTGGGGACACTTTTCCTGGCAAGGCGACTGGTCGGATGATTCCGAGCTGTGGACGGACGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTGCATCGACATCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AGA284304            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTCCGTGCTGGACGTGCGGGACATCAAGGGGCACCGGCTGCTCAAGCTGCGCAACCCGTGGGGACACTTTTCCTGGCAAGGCGACTGGTCGGATGATTCCGAGCTGTGGACGGACGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL AGA284827            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCTTCAACCACTGGCAAACGGGAATTGACGACTTCATGCCCTA CCCGCAGTGCGTGCTGGCGATCCACAGCTCCAAGCGGCTGCTGGTCGAGCAGATCACGCCGCCCCCATTCCTGCTGGCCGACGCCATCATCAACCTGACGCTGCCCAAGGGGCAGCGGCACGAGGGCCGGGAAGGCATGACCGCGTACTACCTGACGAAGGGATGGGCGGGACTGGTCGTGATGGTGGAAAATCGGCACGAAAACAAGTGGATACACGTCAAGTGTGATTGCCAGGAAAGCTACAACGTCGTCTCGACGCGAGGCGAGCTGAAGACGGTCGATTCCGTTCCACCGCTGCAGCGACAGGTGATCATCGTGCTGACGCAGCTGGTTGGCAGCGGCGGCTTCAGGGTAGCCCATCGCCTAACGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09I2W             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGTGGATACACGTCAAGTGTGATTGCCAGGAAAGCTACAACGTCGTCTCGACGCGAGGCGAGCTGAAGACGGTCGATTCCGTTCCACCGCTGCAGCGACAGGTGATCATCGTGCTGACGCAGCTAAAAGGCAGCGGCGGCTTCAGCATAGCCCATCGCCTAACGCATCGGCTGGCCAACTCGGGCGGCCTGCACGACTGGGGACCGCCCTCCTCCACCCACTATCCGCCGATCGAGAACGTGTCCGAGCTGCATTCGCCCCGCATGATAACCTAGAGCGCGACGGGCGGGAAGACCGTGTGGGAGACCGTGCACGAGCAGGGGCGAGCACGGTTGCGAGCTGTGATGGTGTTTTTTCCTCCCCCGTCGACAAACCGCCACACGGAAACGATATTCCAACTAGAAACGGCCCCCTCCCCCCACCCTGCCTCCTTTCCCGTGAACTTGTTGGCCATATTTATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCTAAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCGGATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTGTGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACTCTCAAATATTCATTGATCTGATATTGATAAAATAAAAAAAAAAAACAAAATCTCCATAGCCCACAAGACACACTTCACCAG]
[+] EMBL BX628524             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGGAAAGCTACAACGTCGTCTCGACGCGAGGCGAGCTGAAGACGGTCGATTCCGTTCCACCGCTGCAGCGACAGGTGATCATCGTGCTGACGCAGCTGGAAGGCAGCGGCGGCTTCAGCATAGCCCATCGCCTAACGCATCGGCTGGCCAACTCGGGCGGCCTGCACGACTGGGGACCGCCCTCCTCCACCCACTATCCGCCGATCGAGAACGTGTCCGAGCTGCATTCGCCCCGCATGATAACCTAGAGCGCGACGGGCGGGAAGACCGTGTGGGAGACCGTGCACGAGCAGGGGCGAGCACGGTTGCGAGCTGTGATGGTGTTTTTTCCTCCCCCGTCGACAAACCGCCACACGGAAACGATATTCCAACTAGAAACGGCCCCCTCCCCCCACCCTGCCTCCTTTCCCGTGAACTTGTTGGCCATATTTATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCTAAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGG                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS09I2X             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ggGACCGTGCCCGGGCGGGGGCGAGAACGGTTGCGAGCTGTGATGGTGTTTTTTCCTCCCCCGTCGACAAACCGCCACACGGAAACGATATTCCAACTAGAAACGGCCCCCTCCCCCCACCCTGCCTCCTTTCCCGTGAACTTGTTGGCCATATTTATTAAAAACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCTAAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCGGATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCGGATGATATGTTCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTGTGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACTCTCAAATATTCATTGATCTGATATTGATAAAATAAAAAAAAAAAACAAAATCTCCATAGCCCACAAGACA           ]




>consensus_9068#0
GCGTGCTCGGCAACTGCTGGCTGCTGAGCGCGCTGGCCGTGCTGGCGGAGCGGGAGGACT
TGGTGAAGGAGGTGCTGCTGACGAAGGAGATCTGCCCGCAGTGCGCGTACCAGGTGAAGC
TGTGTAAGGACGCCCGCTGGACGACGGTGCTGGTGGACGATCTGCTGCCGTGCGACAAGC
GCGGTCACCTCGTCTACTCCCAGGCGAAGCGGAAACAGCTCTGGGTGCCGCTGATCGAGA
AGGCGGTCGCGAAGATACACGGCTGCTACGAGGCGCTCGTGTCGGGCCGGGCGATCGAGG
GCCTCGCCACGCTGACCGGCGCACCGTGCGAAAGCATTCCACTGCAGGCCAGCTCATTGC
CACTGCCGAGCGAGGACGATCTCGACCGCGACCTGATCTGGGCCCAGCTGCTCAGCTCCC
GGCTGGTAAAGTTCCTGATGGGGGCGAGCTCGGCGGCGGCAACATGAAGGTGGACGAGGA
CGAGTACCAGCGGAAGGGACTGCGGCCGCGCCACGCTTACTCCGTGCTGGACGTGCGGGA
CATCAAGGGGCACCGGCTGCTCAAGCTGCGCAACCCGTGGGGACACTTTTCCTGGCAAGG
CGACTGGTCGGATGATTCCGAGCTGTGGACGGACGAGCTGCGCGACAGCTTGATGCCGCA
TGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTG
CATCGACATCTGCAAGGTGCGCTCGGAATGGAACGAGGTGCGCCTGTTTGGCACGCTGCA
ACCACTCCGCGCGTTGTCCTGCGTGCTCATAACCGTGCTCGAACCGACCGAGGCCGAGTT
CACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAGCTAGACCT
GTGTGTGGTGCTGTTCCGGACGCGAAACCCCGCCAACCCTGAGGTGGGCCGACTGGTCGA
GCACAGCAAGCGGCAGGTTCGTGGATTCGTCGGCTGCCCAAGATGCTGGAAACGGACCTG
TACATGCTGGTATGTCTCGCCTTCAACCACTGGCACACGGGAATTGACGACTTCATGCAC
TACCCGCAGTGCGTGCTGGCGATCCACAGCTCCAAGCGGCTGCTGGTCGAGCAGATCACG
CCGCCCCCATTCCTGCTGGCCGACGCCATCATCAACCTGACGCTGCCCAAGGGGCAGCGG
CACGAGGGCCGGGAAGGCATGACCGCGTACTACCTGACGAAGGGATGGGCGGGACTGGTC
GTGATGGTGGAAAATCGGCACGAAAACAAGTGGATACACGTCAAGTGTGATTGCCAGGAA
AGCTACAACGTCGTCTCGACGCGAGGCGAGCTGAAGACGGTCGATTCCGTTCCACCGCTG
CAGCGACAGGTGATCATCGTGCTGACGCAGCTGGAAGGCAGCGGCGGCTTCAGCATAGCC
CATCGCCTAACGCATCGGCTGGCCAACTCGGGCGGCCTGCACGACTGGGGACCGCCCTCC
TCCACCCACTATCCGCCGATCGAGAACGTGTCCGAGCTGCATTCGCCCCGCATGATAACC
TAGAGCGCGACGGGCGGGAAGACCGTGTGGGAGACCGTGCACGAGCAGGGGCGAGCACGG
TTGCGAGCTGTGATGGTGTTTTTTCCTCCCCCGTCGACAAACCGCCACACGGAAACGATA
TTCCAACTAGAAACGGCCCCCTCCCCCCACCCTGCCTCCTTTCCCGTGAACTTGTTGGCC
ATATTTATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCTAAAAGCAAA
CACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCG
GATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCG
GATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTG
TGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACTCTCAAATAT
TCATTGATCTGATATTGATAAAATAAAAAAAAAAAACAAAATCTCCATAGCCCACAAGAC
ACACTTCACCAG

consensusID : consensus_9068#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 498
fasta sequence 
                              [CCGCGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTGCATCGACATCTGCAAGGTGCGCTCGGAATGGAACGAGGTGCGCCTGTTTGGCACGCTGCAACCACTCCGCGCGTTGTCCTGCGTGCTCATAACCGTGCTCGAACCGACCGAGGCCGAGTTCACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAGCTAGACCTGTGTGTGGTGCTGTTCCGGACGCGAAACCCCGCCAACCCTGAGGTGGGCCGACTGGTCGAGCACAGCAAGCGGCAGGTAATGGACGGGGAGAGGCAACGCGTTGGAAAGCAAACCCACAGCACAGTACTTTTTGTTTGGAACTCCATACAGGTTCGTGGATTCGTCGGCTGCCACAAGATGCTGGAAACGGACCTGTACATGCTGGTATGTCTCGCCTTCAACCACTG]

[+] EMBL BM640611             [CCGCGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTGCATCGACATCTGCAAGGTGCGCTCGGAATGGAACGAGGTGCGCCTGTTTGGCACGCTGCAACCACTCCGCGCGTTGTCCTGCGTGCTCATAACCGTGCTCGAACCGACCGAGGCCGAGTTCACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAGCTAGACCTGTGTGTGGTGCTGTTCCGGACGCGAAACCCCGCCAACCCTGAGGTGGGCCGACTGGTCGAGCACAGCAAGCGGCAGGTAATGGACGGGGAGAGGCAACGCGTTGGAAAGCAAACCCACAGCACAGTACTTTTTGTTTGGAACTCCATACAGGTTCGTGGATTCGTCGGCTGCCACAAGATGCTGGAAACGGACCTGTACATGCTGGTATGTCTCGCCTTCAACCACTG]




>consensus_9068#1
CCGCGAGCTGCGCGACAGCTTGATGCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATC
GTTTGAAGATGTACTGAGATACTTTGACTGCATCGACATCTGCAAGGTGCGCTCGGAATG
GAACGAGGTGCGCCTGTTTGGCACGCTGCAACCACTCCGCGCGTTGTCCTGCGTGCTCAT
AACCGTGCTCGAACCGACCGAGGCCGAGTTCACCCTGTTCCAGGAGGGGCAACGAAATTC
GGAAAAATCGCAACGCTCCCAGCTAGACCTGTGTGTGGTGCTGTTCCGGACGCGAAACCC
CGCCAACCCTGAGGTGGGCCGACTGGTCGAGCACAGCAAGCGGCAGGTAATGGACGGGGA
GAGGCAACGCGTTGGAAAGCAAACCCACAGCACAGTACTTTTTGTTTGGAACTCCATACA
GGTTCGTGGATTCGTCGGCTGCCACAAGATGCTGGAAACGGACCTGTACATGCTGGTATG
TCTCGCCTTCAACCACTG

consensusID : consensus_9068#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 382
fasta sequence 
                              [CCGCCCACGCGTCCGATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCTAAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCGGATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTGTGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACTCTCAAATATTCATTGATCTGATATTGATAAAATAAAAAAAAAAAACAAAATCTCCATAGCCCACAAGACACACTTCACCAGT]

[+] EMBL BM608206             [CCGCCCACGCGTCCGATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCTAAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCGGATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTGTGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACTCTCAAATATTCATTGATCTGATATTGATAAAATAAAAAAAAAAAACAAAATCTCCATAGCCCACAAGACACACTTCACCAGT]
[-] EMBL AGA285607            [                                                  AAGTCCTTCTAAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCGGATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTGTGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACTCTCAAATATTCATTGATCTGATATTGATAAAATAAAAAAAA                                         ]
[-] EMBL AGA281953            [                                                                      ACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCGGTTGTGGCGGATAAAACGNGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGTGTGTGTGTGTGCGTGTGTTTAGACGACC                                                                                                                  ]




>consensus_9068#2
CCGCCCACGCGTCCGATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAGTCCTTCT
AAAAGCAAACACGCTGGCGGCGTTGTGGGGAAGGCGTGGGTGGGGAGGGGGTAGGGGTCG
GTTGTGGCGGATAAAACGGGAGAGGAAAAGCAAACGACAACGACACTCCGGGCCCGACGA
TTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGACGGTCCGTGTGTTAGTGT
GTGTGTGTGTGCGTGTGTTTAGACGACCGCGTGACACAGAAAAGCACACACGGCGGAACT
CTCAAATATTCATTGATCTGATATTGATAAAATAAAAAAAAAAAACAAAATCTCCATAGC
CCACAAGACACACTTCACCAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9068#0      GCGTGCTCGGCAACTGCTGGCTGCTGAGCGCGCTGGCCGTGCTGGCGGAGCGGGAGGACT 60
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TGGTGAAGGAGGTGCTGCTGACGAAGGAGATCTGCCCGCAGTGCGCGTACCAGGTGAAGC 120
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TGTGTAAGGACGCCCGCTGGACGACGGTGCTGGTGGACGATCTGCTGCCGTGCGACAAGC 180
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      GCGGTCACCTCGTCTACTCCCAGGCGAAGCGGAAACAGCTCTGGGTGCCGCTGATCGAGA 240
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      AGGCGGTCGCGAAGATACACGGCTGCTACGAGGCGCTCGTGTCGGGCCGGGCGATCGAGG 300
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      GCCTCGCCACGCTGACCGGCGCACCGTGCGAAAGCATTCCACTGCAGGCCAGCTCATTGC 360
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CACTGCCGAGCGAGGACGATCTCGACCGCGACCTGATCTGGGCCCAGCTGCTCAGCTCCC 420
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      GGCTGGTAAAGTTCCTGATGGGGGCGAGCTCGGCGGCGGCAACATGAAGGTGGACGAGGA 480
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CGAGTACCAGCGGAAGGGACTGCGGCCGCGCCACGCTTACTCCGTGCTGGACGTGCGGGA 540
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CATCAAGGGGCACCGGCTGCTCAAGCTGCGCAACCCGTGGGGACACTTTTCCTGGCAAGG 600
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CGACTGGTCGGATGATTCCGAGCTGTGGACGGACGAGCTGCGCGACAGCTTGATGCCGCA 660
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTTTGACTG 720
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CATCGACATCTGCAAGGTGCGCTCGGAATGGAACGAGGTGCGCCTGTTTGGCACGCTGCA 780
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      ACCACTCCGCGCGTTGTCCTGCGTGCTCATAACCGTGCTCGAACCGACCGAGGCCGAGTT 840
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAGCTAGACCT 900
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      GTGTGTGGTGCTGTTCCGGACGCGAAACCCCGCCAACCCTGAGGTGGGCCGACTGGTCGA 960
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      GCACAGCAAGCGGCAGGTTCGTGGATTCGTCGGCTGCCCAAGATGCTGGAAACGGACCTG 1020
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TACATGCTGGTATGTCTCGCCTTCAACCACTGGCACACGGGAATTGACGACTTCATGCAC 1080
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TACCCGCAGTGCGTGCTGGCGATCCACAGCTCCAAGCGGCTGCTGGTCGAGCAGATCACG 1140
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CCGCCCCCATTCCTGCTGGCCGACGCCATCATCAACCTGACGCTGCCCAAGGGGCAGCGG 1200
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CACGAGGGCCGGGAAGGCATGACCGCGTACTACCTGACGAAGGGATGGGCGGGACTGGTC 1260
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      GTGATGGTGGAAAATCGGCACGAAAACAAGTGGATACACGTCAAGTGTGATTGCCAGGAA 1320
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      AGCTACAACGTCGTCTCGACGCGAGGCGAGCTGAAGACGGTCGATTCCGTTCCACCGCTG 1380
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CAGCGACAGGTGATCATCGTGCTGACGCAGCTGGAAGGCAGCGGCGGCTTCAGCATAGCC 1440
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      CATCGCCTAACGCATCGGCTGGCCAACTCGGGCGGCCTGCACGACTGGGGACCGCCCTCC 1500
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TCCACCCACTATCCGCCGATCGAGAACGTGTCCGAGCTGCATTCGCCCCGCATGATAACC 1560
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TAGAGCGCGACGGGCGGGAAGACCGTGTGGGAGACCGTGCACGAGCAGGGGCGAGCACGG 1620
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------------------------------
                                                                                  

consensus_9068#0      TTGCGAGCTGTGATGGTGTTTTTTCCTCCCCCGTCGACAAACCGCCACACGGAAACGATA 1680
consensus_9068#2      ------------------------------------------------------------
consensus_9068#1      ------------------------------------CCGCGAGCTGCGCGACAGCTTGAT 24
                                                                                  

consensus_9068#0      TTCCAACTAGAAACGGCCCCCTCCCCCCACCCTGCCTCCTTTCCCGTGAACTTGTTGGCC 1740
consensus_9068#2      ---------------------------------------------------CCGCCCACG 9
consensus_9068#1      GCCGCATGGCGGTTCGGAGGGCGTGTTTTGGATATCGTTTGAAGATGTACTGAGATACTT 84
                                                                           *      

consensus_9068#0      ATATTTATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAG-----TCCTTCTAAAA 1795
consensus_9068#2      CGTCCGATTAAACACTGGCAGGCCGATCGTCGTCATCGTACAAG-----TCCTTCTAAAA 64
consensus_9068#1      TGACTGCATCGACATCTGCAAGGTGCGC-TCGGAATGGAACGAGGTGCGCCTGTTTGGCA 143
                              *  ***   *** *  *  * ***  ** * ** **      *  * *   *

consensus_9068#0      ----GCAAACACGCTG-GCGGCGTTGTGGGGAAGGCGTGGGTGGG---GAGGGGGTAGGG 1847
consensus_9068#2      ----GCAAACACGCTG-GCGGCGTTGTGGGGAAGGCGTGGGTGGG---GAGGGGGTAGGG 116
consensus_9068#1      CGCTGCAACCACTCCGCGCGTTGTCCTGCGTGCT-CATAACCGTGCTCGAACCGACCGAG 202
                          **** *** * * ***  **  ** *     * *    * *   **   *   * *

consensus_9068#0      GTCGGTTGTGGCGGAT---AAAACGGGAGAGGAAAAGCA-AACGACAACGACACTCCGGG 1903
consensus_9068#2      GTCGGTTGTGGCGGAT---AAAACGGGAGAGGAAAAGCA-AACGACAACGACACTCCGGG 172
consensus_9068#1      GCCGAGTTCACCCTGTTCCAGGAGGGGCAACGAAATTCGGAAAAATCGCAACGCTCCCAG 262
                      * **  *    *   *   *  * ***  * ****  *  **  *   * ** ****  *

consensus_9068#0      CCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGA--CGGTCCGT 1961
consensus_9068#2      CCCGACGATTCTGGTCGGATGATATGATCACACGACACGACTGGCCGTGA--CGGTCCGT 230
consensus_9068#1      CTAGACCTGTGTGTGGTGCTGTTCCGGACGCGAAACCCCGCCAACCCTGAGGTGGGCCGA 322
                      *  ***   * **    * ** *  *  * *   ** *  *   ** ***   ** *** 

consensus_9068#0      GTGTTAGTGTGT-GTGTGTG--------TGCGTGTGTTTAGACGACCGCGTGACACAGAA 2012
consensus_9068#2      GTGTTAGTGTGT-GTGTGTG--------TGCGTGTGTTTAGACGACCGCGTGACACAGAA 281
consensus_9068#1      CTGGTCGAGCACAGCAAGCGGCAGGTAATGGACGGGGAGAGGCAACGCGTTGGAAAGCAA 382
                       ** * * *    *   * *        **   * *   ** * **    **  *   **

consensus_9068#0      AAGCACA-CACGGC-----------GGAACTCT-CAAATATTCATTGATCTGATATTGAT 2059
consensus_9068#2      AAGCACA-CACGGC-----------GGAACTCT-CAAATATTCATTGATCTGATATTGAT 328
consensus_9068#1      ACCCACAGCACAGTACTTTTTGTTTGGAACTCCATACAGGTTCGTGGATTCGTCG--GCT 440
                      *  **** *** *            *******   * *  *** * ***  *     * *

consensus_9068#0      AAAATAAAAAAAAAAAACAAAATCTCCATA-GCCCACAAGACACACTTC--ACCAG-- 2112
consensus_9068#2      AAAATAAAAAAAAAAAACAAAATCTCCATA-GCCCACAAGACACACTTC--ACCAGT- 382
consensus_9068#1      GCCACAAGATGCTGGAAACGGACCTGTACATGCTGGTATGTCTCGCCTTCAACCACTG 498
                         * ** *      **    * **  * * **    * * * * * *   ****


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)