cluster # 9143

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Anopheles gambiae
cluster # 9143 cluster # 9143 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9143#0 length = 1042 sequences # 5

consensus_9143#1 length = 1002 sequences # 8
consensus_9143#2 length = 431 sequences # 1

consensusID : consensus_9143#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1042
fasta sequence

                              [AATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTGTAGGTATAGAAAACAAATGCGAAAATAAGTTGCTCTAACATCGA-CCAAAACTATGCAGTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGAAACTGCTG-TCGGCCGAGGGCCGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAGAAGACATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAAAAGATGGCTAAACATTAAGAAAAAAAAAGGGAAATAAATGAAATAACACGCGGAAACACACA]

[+] EMBL CNS08XKB             [AATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTGTAGGTATAGAAAACAAATGCGAAAATAAGTTGCTCTAACATCGA CCAAAACTATGCAGTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGACACTGCTG TCGGCCGAGGG CGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAGAAGACATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAAAAG                                                           ]
[-] EMBL CNS08XKC             [                                                                                                                    AAAACAAATGCGAAAATAAGTTGCTCTAACATCGACCCAAAACTATGCAGTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAAATATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGAAACTGCTG TCGGCCGAGGGCCGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAGAAGACATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAAAAGATGGCTAAACATTAAGAAAAAAAAAGGGAAATAAATGAAATAACACGCGGAAA      ]
[-] EMBL CNS090AF             [                                                                                                                                                                                                        GGATGTTACCAAAAGTGCCGTAAACATTTTTTTTGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGAACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTTCCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATTACCCGCGCCCACCGGGGGCATATGACGGGCTAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGAAACTGCTG TCGGCCGAGGGCCGCAGGTTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAGAAGACATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAAAAGATGGCTAAGGGTTAAGAAAAAAAAAGGGAAATAAATGAAATAACACGCGGATGCACACA]
[-] EMBL CNS08HCP             [                                                                                                                                                                                                                                                                                                                            TGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTAATTGCTGAACTGCCCTTCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTAACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATAACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGAAACTGCTGTTCGGCCGAGGGCCGCAGATTAGGCAAGGCGGGTGTGGTGATT                                                                                                                                                                                                                                               ]
[+] EMBL CNS08P0W             [                                                                                                                                                                                                                                                                                                                                                                                                    ttttttttATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGACACTGCTG TCGGCCGAGGG CGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTTATGATTATTCTGACTCCGAGCTGGAAGAAGACATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATGAAACGGACGGGGATGTCGATGCGGATGCTGAAACCAAGCGTCCA                                                                    ]




>consensus_9143#0
AATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCG
ACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTGTAGGTATAGAAAA
CAAATGCGAAAATAAGTTGCTCTAACATCGACCAAAACTATGCAGTAGGATATAGCAATG
TGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTC
CGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCA
ACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACA
ATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACG
CCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCA
CGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACA
GTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACC
ATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGC
TGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGT
CAAAGGAAGCGATCCGCGGTGTCCCGAACCGGAAACTGCTGTCGGCCGAGGGCCGCAGAT
TAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATT
ATTCTGACTCCGAGCTGGAAGAAGACATCAGCGACGATGAGAACGGCGACGCGGAACACG
AGAAGGATGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTG
AAACCAAGCGTCCACCGAAAAAGATGGCTAAACATTAAGAAAAAAAAAGGGAAATAAATG
AAATAACACGCGGAAACACACA

consensusID : consensus_9143#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1002
fasta sequence

                              [CCGCCCACGCGGACGGGCGCAGAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGACACTGCTGTCGGCCGAGGG-CGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAAAAAAAATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAAAAGATGGCTAAACATTAAGAAAAAAAAAGGGAAATAAATGAAATTACACGCG]

[+] EMBL BM605281             [CCGCCCACGCGTCCGGGCGCAGAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTGAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCGTCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAGGAGAAGTCGAAGG                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08JJ9             [      gaaCGGACGGGCGCAGAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTTAGGATATAGCGATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGACACTGCTGTAGGCCGAGGG CGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGT                                                                                                                                                                                                                ]
[+] EMBL CNS09L5G             [         CGGACGGGCGC GAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCG TTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCAGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGTTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGACACTGCTGTCGGCCGAGGG CGCAGATTAGGCAAGG                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08HCO             [          GGACGGGCGCAGAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGACACTGCTGTCGGCCGAGGG CGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTTTTTGTGACGATAGTG                                                                                                                                                                                                      ]
[+] EMBL CNS090AE             [                     GAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCCCCCCTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAAAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAACCGGACACTGCTGTCGGCCGAGGG CGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAAAAAAAATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACC                                                        ]
[-] EMBL CNS08JJA             [                                                                                               gACAGAGGACCTTAAACCAATCATTCAGGAAGCGATAGAGTTAGGATATAGCGTTGTGGCGATCGAGCAAGTAGTGGATGTTACCAAAAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGAAAGATTCTTCTGCTCAACCGGTTAACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTAAATCGATCGAACAATATTCGCTGCTACAACCTTATTGCTGAACTGCCCCTCTCGGACACCAGCTATCAGTACCCCTGCCAAACGTTTACATGTGATATTATTACGTACAACCAGGCATCAATTCACCTGCGCACCACCCGCAACTTTTACTACCTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGGAAGCAAACTTTTACCCGCGCCCACCGGTACCATATTACGGGCAAGTCGCGGAACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGTTGTCCCGAACCGGAAACTGCTTTCGGCCGAGGGCCGCAGTTTAGGCAAGGCGGGTGTGGTGATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAGAAAACATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGGTGTCAACATGGACGATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAAAAGATGGCTAAACATTAAGAAAAAAAAAGGGAAATAAATGAAATTACACGCG]
[-] EMBL CNS08P0X             [                                                                                                                                                                          GGATGTTACCAAGAGTGCCGTAAAAAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAGGCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCACTGCCCCTCTCGGACACCAGCTATCAGTACGCCTGCCAAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09L5H             [                                                                                                                                                                                                                                                                                                         GCGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTGGCTGCTACAACCTGATTGCTGCACTGCCCATCTCAGACACCAGCTATCAGTACGCCTGCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_9143#1
CCGCCCACGCGGACGGGCGCAGAACGATCCAATCCACACCCGGGCAGGATGAATAACTTT
ACCGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACCAATCATT
CAGGAAGCGATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGATGTTACC
AAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTAAAG
GCCGCATTCGGCGGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGGCGATGCG
ACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTGATTGCTGCA
CTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGTGATATTATA
ACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTACCTCGCGGTC
GATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCGGCGGATCGG
AAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGGAACGTAATC
ATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATAGCAAATCTG
GGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGTGTCCCGAAC
CGGACACTGCTGTCGGCCGAGGGCGCAGATTAGGCAAGGCGGGTGTGGTGATTGCGCGCC
GCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAAAAAAAAATCA
GCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGACGATCACGATG
AAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAAAAGATGGCTA
AACATTAAGAAAAAAAAAGGGAAATAAATGAAATTACACGCG

consensusID : consensus_9143#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence

                              [TGCTCAGCAGAATTGCCAGAGGTTGCAGAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCTGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAATAGAGGACTCAAACCAATCATTCAGGAAGCTATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTGGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTGAAGGCCGCATTCGGNCGGACAGATCCGTCTGGTCAACGGTTGACCGTCGTGTTCGGCCGATGCTGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGTACAACTGATTGCTGNACTGGCCATCTCGGACACCAGCTATCAGTACGCCTGNCAAACGATGACATGTGATATTATAACGTA]

[+] EMBL AL696645             [TGCTCAGCAGAATTGCCAGAGGTTGCAGAACGATCCAATCCACACCCGGGCAGGATGAATAACTTTACCTGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAATAGAGGACTCAAACCAATCATTCAGGAAGCTATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTGGTGGATGTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAACTGAAGGCCGCATTCGGNCGGACAGATCCGTCTGGTCAACGGTTGACCGTCGTGTTCGGCCGATGCTGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGTACAACTGATTGCTGNACTGGCCATCTCGGACACCAGCTATCAGTACGCCTGNCAAACGATGACATGTGATATTATAACGTA]




>consensus_9143#2
TGCTCAGCAGAATTGCCAGAGGTTGCAGAACGATCCAATCCACACCCGGGCAGGATGAAT
AACTTTACCTGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAATAGAGGACTCAAACCA
ATCATTCAGGAAGCTATAGAGTTAGGATATAGCAATGTGGCGATCGAGCAAGTGGTGGAT
GTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAA
CTGAAGGCCGCATTCGGNCGGACAGATCCGTCTGGTCAACGGTTGACCGTCGTGTTCGGC
CGATGCTGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGTACAACTGATT
GCTGNACTGGCCATCTCGGACACCAGCTATCAGTACGCCTGNCAAACGATGACATGTGAT
ATTATAACGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9143#0      ------------------------------------AATCCACACCCGGGCAGGATGAAT 24
consensus_9143#1      ------CCGCCCACGCGGACGGGCGCAGAACGATCCAATCCACACCCGGGCAGGATGAAT 54
consensus_9143#2      TGCTCAGCAGAATTGCCAGAGGTTGCAGAACGATCCAATCCACACCCGGGCAGGATGAAT 60
                                                          ************************

consensus_9143#0      AACTTTACC-GGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACC 83
consensus_9143#1      AACTTTACC-GGCTTTTCCGATCTGTGTATTCCAGCGACCCGAACAGAGGACCTTAAACC 113
consensus_9143#2      AACTTTACCTGGCTTTTCCGATCTGTGTATTCCAGCGACCCGAATAGAGGAC-TCAAACC 119
                      ********* ********************************** ******* * *****

consensus_9143#0      AATCATTCAGGAAGCGATAGAGTGTAGGTATAGAAAACAAATGCGAAAATAAGTTGCTCT 143
consensus_9143#1      AATCATTCAGGAAGCGATAGAGT------------------------------------- 136
consensus_9143#2      AATCATTCAGGAAGCTATAGAGT------------------------------------- 142
                      *************** *******                                     

consensus_9143#0      AACATCGACCAAAACTATGCAGTAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGAT 203
consensus_9143#1      ----------------------TAGGATATAGCAATGTGGCGATCGAGCAAGTAGTGGAT 174
consensus_9143#2      ----------------------TAGGATATAGCAATGTGGCGATCGAGCAAGTGGTGGAT 180
                                            ******************************* ******

consensus_9143#0      GTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAA 263
consensus_9143#1      GTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAA 234
consensus_9143#2      GTTACCAAGAGTGCCGTAAACAATCAGGACGTTGTTCCGAAGCCGTTTTGCCTCAAGGAA 240
                      ************************************************************

consensus_9143#0      CTAAAGGCCGCATTCGGC-GGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGG 322
consensus_9143#1      CTAAAGGCCGCATTCGGC-GGACAGATTCGTCTGCTCAACCGGTTGACCGTCGTGTTCGG 293
consensus_9143#2      CTGAAGGCCGCATTCGGNCGGACAGATCCGTCTGGTCAAC-GGTTGACCGTCGTGTTCGG 299
                      ** **************  ******** ****** ***** *******************

consensus_9143#0      C-GATGC-GACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTG 380
consensus_9143#1      C-GATGC-GACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTGCTACAACCTG 351
consensus_9143#2      CCGATGCTGACCGTTTCGCTGCTACTGAATCGATCGAACAATATTCGCTG-TACAAC-TG 357
                      * ***** ****************************************** ****** **

consensus_9143#0      ATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGT 440
consensus_9143#1      ATTGCTGCACTGCCCATCTCGGACACCAGCTATCAGTACGCCTGCCAAACGATGACATGT 411
consensus_9143#2      ATTGCTGNACTGGCCATCTCGGACACCAGCTATCAGTACGCCTGNCAAACGATGACATGT 417
                      ******* **** ******************************* ***************

consensus_9143#0      GATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTAC 500
consensus_9143#1      GATATTATAACGTACAACCAGGCATCGATTCACCTGCGCACGACCCGCAACTTTTACTAC 471
consensus_9143#2      GATATTATAACGTA---------------------------------------------- 431
                      **************                                              

consensus_9143#0      CTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCG 560
consensus_9143#1      CTCGCGGTCGATCGGAACATCGCGTTCGAGATAAAGTACAGTCCGGCCATTGTAACGCCG 531
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      GCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGG 620
consensus_9143#1      GCGGATCGGAAGCAAACTATCACCCGCGCCCACCGGTACCATATGACGGGCAAGTCGCGG 591
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      AACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATA 680
consensus_9143#1      AACGTAATCATCTCCAGCGGCGCTACCAATCCGTTCCAGCTGAGAAGTCCGTACGATATA 651
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      GCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGT 740
consensus_9143#1      GCAAATCTGGGACTGATTTTTGGGCTGACGGAAGAGAAGTCAAAGGAAGCGATCCGCGGT 711
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      GTCCCGAACCGGAAACTGCTGTCGGCCGAGGGCCGCAGATTAGGCAAGGCGGGTGTGGTG 800
consensus_9143#1      GTCCCGAACCGGACACTGCTGTCGGCCGAGGGC-GCAGATTAGGCAAGGCGGGTGTGGTG 770
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      ATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAA 860
consensus_9143#1      ATTGCGCGCCGCGAACCTAACCGTGACGATAGTGATGATTATTCTGACTCCGAGCTGGAA 830
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      GAAGACATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGAC 920
consensus_9143#1      AAAAAAATCAGCGACGATGAGAACGGCGACGCGGAACACGAGAAGGATGTCAACATGGAC 890
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      GATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAA 980
consensus_9143#1      GATCACGATGAAACGGACGAGGATGTCGATGCGGATGCTGAAACCAAGCGTCCACCGAAA 950
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      AAGATGGCTAAACATTAAGAAAAAAAAAGGGAAATAAATGAAATAACACGCGGAAACACA 1040
consensus_9143#1      AAGATGGCTAAACATTAAGAAAAAAAAAGGGAAATAAATGAAATTACACGCG-------- 1002
consensus_9143#2      ------------------------------------------------------------
                                                                                  

consensus_9143#0      CA 1042
consensus_9143#1      --
consensus_9143#2      --