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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9183#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1088 fasta sequence
[CGCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTAAAATCTCTACAGGATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT-AAAG-AAACCCCAA-A-CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC-AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC-----ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG-A-ATGATA-CGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTGTGCACCATGCACGC-TCGGACGAATTAACCAGTCCAGTAGGCCAAC]
[-] EMBL CNS09DM3 [CGCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTAAAATCTCTACAGGATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT AAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG C A AATA CGCAAATCCATGcc ]
[+] EMBL BM593715 [ ccgTTTTTAAATCTCTACAGGATTGCCACTATTTATTTCGTCCATCGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTGGCTTAGGTTCATTACAAAAATCACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGCTAGAATGAGCACTATT AAAGAAAAACCGAACAGCAGTTAGGGAATACGATAGCGAAGAGTGCATGGGAAATGGGGTAACTGGTCTGATCAACCGCGTGAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAACAAAATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGAGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGAGTTTAAAACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCCTGCTACCTGCCGTCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGCGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCA ]
[-] EMBL CNS08UCH [ ATCTCTACAGGATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT AAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCGTATATG TA CGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTGTGCACCATGCACGC TCGGACG ]
[+] EMBL CNS08UCI [ TTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT AAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG A ATGCTA CGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTGTGCACCATGCACGCTTCGGACGAATTAACCAGTCCAGTAGGCCAAC]
[-] EMBL CNS08DUK [ ATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACATATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCCGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATTTTTTTGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGC ]
[-] EMBL CNS09G83 [ cgtTCGTCGTCGGCGTCTTTAT GCG TGTAA TA TG CCTC C GCG GT GCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAGTCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCC ]
[-] EMBL CNS08XBD [ CTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG A AATTTACCGCACCTGCA ]
consensusID : consensus_9183#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 939 fasta sequence
[ACTTTATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG-AAACCCCAA-A-CAGTTAAGGAAAAAG-ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC-AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTCACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACAAAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCGAATGCTACGCACCTGCATGCCAGTGGGCCAACAG]
[+] EMBL CNS09DM4 [ACTTTATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAG ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTCACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACAAAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCGAATGCTACGCACCTGCATGCCAGTGGGCCAACAG]
[-] EMBL BM594938 [ ATTGCCACTATTTATTTCGTCCATCGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTGGCTTAGGTTCATTACACAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGCTAGAATGAGCACTATTAAAGAAAAACCGAACAGCAGTTAGGGAATACG ATAGCGAAGAGTGCATGGGAAATGGGGTAACTGGTCTGATCAACCGCGTGAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAACAAAATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGAGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGAGTTTAAAACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCACCTGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCgg ]
[+] EMBL CNS08DUL [ TTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAGCATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACATATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAATTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTCACCCGCCGAAAAAAAAAAAAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTT ]
[+] EMBL CNS09G84 [ TTATTTCGTCCAACGTGTCATTTCTTTAAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAG ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACA ]
[-] EMBL CNS08LP4 [ TGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAG ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTA ]
consensusID : consensus_9183#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 783 fasta sequence
[TGTCATTTTGCTTTTAGAAGATGTGTAAGCTCTTTGTGTGGGCNTTGAGGTTCATGTACACNTTATTGAGCGGATATAGGGTGGCNACATATNTTGCCTCNTCTAGTGTATTTTNTCACGCGTGTTCCGCGTTGAACCATACCACGTGCTAGTANATGAGCACCTATTAAAGGAAAAACCGATACACGCAGTTAGGGTATACGATAGCGATAGAGTNNNCATGGGANATGGGTGTAACTGCTCTGATCAACCGCGTGAAGCTGANAGTTCTTGTAATACCCNTAATCGNTTACTTAGACAATAGTATAAATCTTATGTTGACGATGACGTACGGATAGATTGGGCGGTTTTTCANAGCCANATAGAACCCGNTGTACTACANAGNNTAATANTAAAGTAGACATGTTAGGAATGNAATAGTTACGGTATCATAGTTNTAGATATTCAGANNTCAAATGTGCTAACACTGTCCAAGNATATCTCCTGGTTGCTTTTCTCTCGAGTTTGAATACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCACGCTGGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCACTCACGCCGTAGTGGCCGTTGAAACGTTTCGCATAAATGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTAATCGTGACCAGCAGGTTCGGATGCCGATTACTATTAATCCNTGG]
[-] EMBL AL931046 [TGTCATTTTGCTTTTAGAAGATGTGTAAGCTCTTTGTGTGGGCNTTGAGGTTCATGTACACNTTATTGAGCGGATATAGGGTGGCNACATATNTTGCCTCNTCTAGTGTATTTTNTCACGCGTGTTCCGCGTTGAACCATACCACGTGCTAGTANATGAGCACCTATTAAAGGAAAAACCGATACACGCAGTTAGGGTATACGATAGCGATAGAGTNNNCATGGGANATGGGTGTAACTGCTCTGATCAACCGCGTGAAGCTGANAGTTCTTGTAATACCCNTAATCGNTTACTTAGACAATAGTATAAATCTTATGTTGACGATGACGTACGGATAGATTGGGCGGTTTTTCANAGCCANATAGAACCCGNTGTACTACANAGNNTAATANTAAAGTAGACATGTTAGGAATGNAATAGTTACGGTATCATAGTTNTAGATATTCAGANNTCAAATGTGCTAACACTGTCCAAGNATATCTCCTGGTTGCTTTTCTCTCGAGTTTGAATACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCACGCTGGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCACTCACGCCGTAGTGGCCGTTGAAACGTTTCGCATAAATGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTAATCGTGACCAGCAGGTTCGGATGCCGATTACTATTAATCCNTGG]
consensusID : consensus_9183#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 657 fasta sequence
[TTACATTCGTTTGNTTTCACCTGCCATCTACCTTTCTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATTACTATCAGTGCCACTTTCGCGCGAGATAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGAGATAAGCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAAGGTACGCCGAATGCTGCGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCCT---NA-CGTGC-CGATTCTGCCTAATTAAACCAGGACGGGCTGTCCGGCGACTGTTTGTTCGTGCCGTCGATGCCACAGAAGAAGAATCCTTTGCGTGAATCCTCCGAGCTGTTTACCTGNGGGGA]
[-] EMBL BX467198 [TTACATTCGTTTGNTTTCACCTGCCATCTACCTTTCTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATTACTATCAGTGCCACTTTCGCGCGAGATAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGAGATAAGCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAAGGTACGCCGAATGCTGCGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCCT NA CGTGC CGATTCTGCCT ]
[-] EMBL AL692162 [ TTCGGATTGCCGATTACTATCAGTGCCACTTTCGCGCGAGATAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGAGATAAGCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGCGCTCCTGGCCATGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAAGGTACGCCGAATGCTGCGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCTTGTGCACCATGCACGCTTCGGCCGAATTAAACCAGGACGGGCTGTCCGGCGACTGTTTGTTCGTGCCGTCGATGCCACAGAAGAAGAATCCTTTGCGTGAATCCTCCGAGCTGTTTACCTGNGGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9183#0 CGCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTAAAATCTCTACAGGATTGCCAC 60
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ------------------------------------------------------------
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 TATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGG 120
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ------------------------------------------------------------
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 TTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGT 180
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ------------------------------------------------------------
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 CCCTAAACCAACACGGTAGAATGAGCACTATTAAAGAAACCCCAAACAGTTAAGGAAAAA 240
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ------------------------------------------------------------
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 GATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAAT 300
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ------------------------------------------------------------
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 TCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAACAGATTGC 360
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ------------------------------------------------------------
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 GGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGAT 420
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ------------------------------------------------------------
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 CAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGA 480
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 ----------------------------------------------------ACTTTATT 8
consensus_9183#2 -----------------------------------------------------------T 1
consensus_9183#0 TTTTAAAACGTATCGGAATCACCGTAGTGTTACATT-GTTTGTT--CACCTGCCGTCCAC 537
consensus_9183#3 -----------------------------TTACATTCGTTTGNTTTCACCTGCCATCTAC 31
consensus_9183#1 GCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCT-CTTTGTTG 67
consensus_9183#2 GTCATT-TTGCTTTTAGAAGATGTGTAAGCTCTTTGTGTGGGCNTTGAGGT-TCATGTAC 59
* * * * * *
consensus_9183#0 -CGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAA 596
consensus_9183#3 -CTTTCTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAA 90
consensus_9183#1 CTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCC 127
consensus_9183#2 ACNTTATTGAGCGGATATAGGGTGGCNACATATNTTGCCTCNTCTAGTGTATTTTNTCAC 119
* * * * * * ** *
consensus_9183#0 TTATTGCCC--------TCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACC 648
consensus_9183#3 TTATTGCCC--------TCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACC 142
consensus_9183#1 GCGTGTCCC----TAAACCA----ACACGGTAG--AATGAGCAC-TATTAAAG--AAACC 174
consensus_9183#2 GCGTGTTCCGCGTTGAACCATACCACGTGCTAGTANATGAGCACCTATTAAAGGAAAAAC 179
* ** ** * * * * ** * * *
consensus_9183#0 CGA-GCGTACACCCACAGTAAGTGCCATCG-TCCAGCGCTCGTTGTAG-CACACGCATCC 705
consensus_9183#3 CGA-GCGTACACCCACAGTAAGTGCCATCG-TCCAGCGCTCGTTGTAG-TACGCGCATCC 199
consensus_9183#1 C----CAAACAGTTAAGGAAAAAGATGACG-TAGAGTGCA--TGGGAAACGGG-GTAACT 226
consensus_9183#2 CGATACACGCAGTTAGGGTATACGATAGCGATAGAGTNNNCATGGGANATGGGTGTAACT 239
* * ** * * * * ** * ** * * * * * *
consensus_9183#0 ACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCG-ATCACTATCAGC--GCCACTTTCG 762
consensus_9183#3 ACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCG-ATTACTATCAGT--GCCACTTTCG 256
consensus_9183#1 GG-TCTGATCAACCGCGTAAAGC--GAAATTCTTGAAAG----CAAATCGA--AATTA-A 276
consensus_9183#2 GC-TCTGATCAACCGCGTGAAGCTGANAGTTCTTGTAATACCCNTAATCGNTTACTTAGA 298
* * *** ** *** ** * * * * **
consensus_9183#0 CGCGAG-ACAGAGCT-ACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTT 820
consensus_9183#3 CGCGAG-ATAGAGCT-ACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTT 314
consensus_9183#1 CAATAGTATAAATCTTATGTT-------ACATACA-ACAGATTG--CGGTTTTCAGCAA- 325
consensus_9183#2 CAATAGTATAAATCTTATGTTGACGATGACGTACGGATAGATTGGGCGGTTTTTCANAGC 358
* ** * * * ** * *** **** * * *
consensus_9183#0 GGAATCGTGTGCGACATAA-GCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGC 879
consensus_9183#3 GGAATCGTGTGCGAGATAA-GCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGC 373
consensus_9183#1 -----AGAACC---------AAACACATTAA-ACTAAAGT-GACATGT--AGAATGAAAG 367
consensus_9183#2 CANATAGAACCCGNTGTACTACANAGNNTAATANTAAAGTAGACATGTTAGGAATGNAAT 418
* * * * * ** **** *
consensus_9183#0 GCTCCTGGCCCTGGAATTCT-----TCCACCGAGCCAAT---CTTGGGCGGTTCCAGCAT 931
consensus_9183#3 GCTCCTGGCCCTGGAATTCT-----TCCACCGAGCCAAT---CTTGGGCGGTTCCAGCAT 425
consensus_9183#1 ---TACGAT----CAATTAAA---ATTCA--ACTCAATT---CTAACACTGTCCAAAA-- 410
consensus_9183#2 AGTTACGGTATCATAGTTNTAGATATTCAGANNTCAAATGTGCTAACACTGTCCAAGNAT 478
* * ** * ** * * * ** * ** * *
consensus_9183#0 GGCCGC--ATCGAATGTACGCCGAAT---GATACGCACCTGCATGACGTACGGTGTGATA 986
consensus_9183#3 GGCCGC--ATCGAAGGTACGCCGAAT---GCTGCGCACCTGCATGACGTACGGTGTGATA 480
consensus_9183#1 -TCTCCTGGTTGCTTTTCTCTCGATTTTAAA-ACGTATCGGAATCAC-CGTAGTGTTACA 467
consensus_9183#2 ATCTCCTGGTTGCTTTTCTCTCGAGTTTGAATACGTATTGGAATCAC-CATAGTGTTACA 537
* * * * * *** * ** * * ** ** **** * *
consensus_9183#0 ATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTG-TG 1045
consensus_9183#3 ATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCCTNACG 540
consensus_9183#1 TTGTTTGTTCACCT--GCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCG 525
consensus_9183#2 TCGTTTGTTCACGCTGGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCG 597
* * * * * * * * * *** * *
consensus_9183#0 C-ACCA--TGCACGCTCGGACGAATTAACCAGTCCAGT-AGG--CCAAC----------- 1088
consensus_9183#3 T-GCCG--ATTCTGCCTAATTAAACCAGGACGGGCTGT-CCG--GCGACTGTTTGTTCGT 594
consensus_9183#1 TCGTCGTCATACTGGCGCTGTAAATTATTGCC-CTCACGGCGC-GTGGCCGATGAAACGT 583
consensus_9183#2 TCGTCGTCATACTGGCGCTGTAAATTATTGCCACTCACGCCGTAGTGGCCGTTGAAACGT 657
* * ** * * *
consensus_9183#0 ------------------------------------------------------------
consensus_9183#3 GCCG--TCGATGCCACAGAAGAAGAATCCTTTGCGTGAAT-CCTCCGAGCTGTTTACCTG 651
consensus_9183#1 TTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTT 643
consensus_9183#2 TTCGCATAAATGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTT 717
consensus_9183#0 ------------------------------------------------------------
consensus_9183#3 NGGGGA------------------------------------------------------ 657
consensus_9183#1 GTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCA 703
consensus_9183#2 GTAGTACGCGCATCCACGTTTAATCG-TGACCAGCAGGTTCGGAT-GCCGATTACTATTA 775
consensus_9183#0 ------------------------------------------------------------
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 GCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAA 763
consensus_9183#2 ATCCNTGG---------------------------------------------------- 783
consensus_9183#0 ------------------------------------------------------------
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 TCTTGGTGTTGGAATCGTGTGCGACAAAAGCACTGGATGAGCGAACCGTCGACACAATGA 823
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 ------------------------------------------------------------
consensus_9183#3 ------------------------------------------------------------
consensus_9183#1 TCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTTCCAGCA 883
consensus_9183#2 ------------------------------------------------------------
consensus_9183#0 --------------------------------------------------------
consensus_9183#3 --------------------------------------------------------
consensus_9183#1 TGGCCGCATCGAATGTACGCCGAATGCTACGCACCTGCATGCCAGTGGGCCAACAG 939
consensus_9183#2 --------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||