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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9204#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1615 fasta sequence
[GAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCTCCTTCAGGCTTCTTTCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGATCAAACCGAATCGGCCGCTATACTGAAAATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTTCTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATATCGTAAAGGCAATCTATACTAGTACTACTTTTACCATTACCAGCACTATCACTATCGACAGCATTGGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTATGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGC]
[+] EMBL CNS08HAY [GAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCTCCTTCAGGCTTCTTTCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCGGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGG ]
[+] EMBL BM624950 [ ccgGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGATCAAACCGAATCGGCCGCTATACTGAAAATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTA ]
[+] EMBL BM580073 [ ccgCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGTCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGACCAAACCGAATCGGCCGCTATACTGAAAATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTTCTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATA ]
[+] EMBL BM615670 [ ccgGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTTCTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATATCGTAAAGGCAATCTATACTAGTACTACTTTTACCATTACCAGCACTATCACTATCGACAGCATTGGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTATGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGC]
consensusID : consensus_9204#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1534 fasta sequence
[TTCTGGACTCTCCATGCAGATGAAGCAAGATCAACAGCAGATGATTCCGGAAAAGAAAAAGTGGATTCACGACCCTTCAAGTGATCTCTGCAAACCGCTCAACTGCAAGAAGAAAGAGCTCTGCCTGCTGGAGGACGCGTACACGGCTGTCTGCGTTTCGAAGAAGGAACTCCACAAGAACAAATTCATCAGCAGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTAGGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGCAGAGTGTGTGCGTGCGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGGTTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACACACATTTTTACCAAAAAGAAGCAAAACTATAAAAAATATTACACAAAAAAAGAGAAAGAGACAAAACAGAGCGAAAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGAGGGAAAAACGTCAAACTGGTTGAGCATAATGATAGCAGAAACAGAAAGGAAAAGAAAGGCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATAAAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGACAGAGAAGGGAGAAAAAGCACGAAGCTGATAGAGAGAAAGAGAGAGAGAGAGGGACACTCCTATACCCCCAATCAAGAAGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCAAGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGACGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATTCGTGTGCGTGACAGAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTCTTTCGAGTTACCAATCCATCTCCGATCGATTGCGCGTGGCAAAAGTTGCTCTTTTAAGCGACAAAATGCAAATTGTATGCCAAGAAAGGCTTAAAAAGGTGGCCCTCTTACACGTTGAGCGGGAAGCATGTGTTTGGAAGAGTGTGAGGTGGTGTGTGTGTTGCGGACACAAACACAGAATAGGAATTTAAACCTC]
[+] EMBL BX608297 [TTCTGGACTCTCCATGCAGATGAAGCAAGATCAACAGCAGATGATTCCGGAAAAGAAAAAGTGGATTCACGACCCTTCAAGTGATCTCTGCAAACCGCTCAACTGCAAGAAGAAAGAGCTCTGCCTGCTGGAGGACGCGTACACGGCTGTCTGCGTTTCGAAGAAGGAACTCCACAAGAACAAATTCATCAGCAGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTAGGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGCAGAGTGTGTGCGTGCGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGGTTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACACACATTTTTACCAAAAAGAAGCAAAACTATAAAA ]
[+] EMBL BX605128 [ CGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGGTTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACACACATTTTTACCAAAAAGAAGCAAAACTATAAAAAATATTACACAAAAAAAGAGAAAGAGACAAAACAGAGCGAAAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGAGGGAAAAACGTCAAACTGGTTGAGCATAATGATAGCAGAAACAGAAAGGAAAAGAAAGGCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATAAAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGACAGAGAAGGGAGAAAAAGCACGAAGCTGATAGAGAGAAAGAGAGAGAGAGAGGGACACTCCTATACCCCCAATCAAGAAGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCAAGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGACGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATTCGTGTGCGTGACAGAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTCTTTCGAGTT ]
[+] EMBL BX616006 [ GAGAGAGAGAGAGAGAGAGAAACGAGGGAAAAACGTCAAACTGGTTGAGCATAATGATAGCAGAAACAGAAAGGAAAAGAAAGGCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATAAAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGACAGAGAAGGGAGAAAAAGCACGAAGCTGATAGAGAGAAAGAGAGAGAGAGAGGGACACTCCTATACCCCCAATCAAGAAGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCAAGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGACGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATTCGTGTGCGTGACATAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTCTTTCGAGTTACCAATCCATCTCCGATCGATTGCGCGTGGCAAAAGTTGCTCTTTTAAGCGACAAAATGCAAATTGTATGCCAAGAAAGGCTTAAAAAGGTGGCCCTCTTACACGTTGAGCGGGAAGCATGTGTTTGGAAGAGTGTGAGGTGGTGTGTGTGTTGCGGACACAAACACAGAATAGGAATTTAAACCTC]
consensusID : consensus_9204#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1417 fasta sequence
[CCGCCCACGCGTCCGCCGGAGCGACGGGACACCTGCGAGCATTCATCCGAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCACCTTCAGGCTTCTTTCCGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGTCCGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGGGGGAACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCAAAGTGGCAACCGAACACGTCATCGCCGATGAAATACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAAACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTG---CAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTGCTGCACAATGCGAATTATTTTATCACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAGCTATTTAAATATTATCTTTCGATCAACGTGAGAAAGGCCGTGTCTTAAAGCTAGAATGTTAAACAAGTTTTCATTTTTAAATTGTTCACCTTTTCGCGTTGAAATCGATCCGTCACTTTGGGGGAGAAGCGAGTGCACGCACACAAATCGATTAAAAACAACAC]
[+] EMBL BM632150 [CCGCCCACGCGTCCGCCGGAGCGACGGGACACCTGCGAGCATTCATCCGAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCACCTTCAGGCTTCTTTCCGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGTCCGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATG ]
[-] EMBL CNS08HAZ [ CCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGGGGGAACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCAAAGTGGCAACCGAACACGTCATCGCCGATGAAATACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAAACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTCCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTG CAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTTTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTG TGCACAATGCG ]
[+] EMBL CNS09EY7 [ CTCGCGG CCGGGCATGGG CCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTG CAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTGCTGCACAATGCGAATTATTTTATCACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAG ]
[+] EMBL CNS09HEG [ ACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAAAAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACAT ]
[-] EMBL CNS09HEH [ GTAAACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAAAACGATGGGCGGCCCGGTACTTAATAAAGAT ]
[-] EMBL CNS09EY8 [ CCGCGAACGGTCCGGGCACGCCACGGGAAAACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGAACTGCCAATGTACCTCTTTGCTCACATTGCCCCCACAACCACAACCCTTCATTTTTACAACATTTTG CAACAACAACAACAACAACAAAAAAACAACCAATCGACAACAACCCGCAAGGCTGAATTTGTGGGGTAAAACAGCGACCGACTTTTTTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCT ]
[+] EMBL BM614649 [ cCGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTGCAACAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTT TTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGT TGTGTTTGTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGCGCTGCACAATGCGAATTATTTTATCACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAGCTATTTAAATATTATCTTTCGATCAACGTGAGAAAGGCCGTGTCTTAAAGCTAGAATGTTAAACAAGTTTTCATTTTTAAATTGTTCACCTTTTCGCGTTGAAATCGATCCGTCACTTTGGGGGAGAAGCGAGTGCACGCACACAAATCGATTAAAAACAACAC]
consensusID : consensus_9204#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence
[CCGCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGCCCTCCAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGGACCAAGCGGGGC]
[+] EMBL BM583680 [CCGCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGCCCTCCAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGGACCAAGCGGGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9204#2 ----------------------------------------------------------CC 2
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 GAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATA 60
consensus_9204#1 ------------------------------------------------------------
consensus_9204#2 GCCCACGCGTCCGCCGGAGCGACGGGACACCTGCGAGCATTCATCCGAGGCCAAAGCATT 62
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 GCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATG 120
consensus_9204#1 -----TTCTGGACTCTCCATGCAGATGAAGCAAGATCAACAGCAGATGATTCCGGAAAAG 55
consensus_9204#2 TCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGG 122
consensus_9204#3 -----------------------------------CCGCCGAACTCCTCCATTAGGCCAT 25
consensus_9204#0 CC-CGGCGGCCCGATGGCTCCTTCAGGCTTC----TTTCCGAACTCCTCCATTAGGCCAT 175
consensus_9204#1 AAAAAGTGGATTCACGACCCTTCAAGTGATC----TCTGCAAACCGCTCAACTGCAAGAA 111
* * *
consensus_9204#2 CCCGGCACCGAGCCCACTGGGACA---GTTACCACCA-AACGAAGGCAT-GCCCGGCGGC 177
consensus_9204#3 CACAACCTTCA---CACCCTAGTA---GTCAGCAGTC-CCCACATCCACAGCCTCCAAAC 78
consensus_9204#0 CACAACCTTCA---CACCCTAGTA---GTCAGCAGTC-CCCACATCCACAGCCTCCAAAC 228
consensus_9204#1 GAAAGAGCTCTGCCTGCTGGAGGACGCGTACACGGCTGTCTGCGTTTCGAAGAAGGAACT 171
* * ** *
consensus_9204#2 CCGATGGCACCT-TCAGGCTTCTTTCCGCCGTTCATGGGTGGCCCCCGATATCCACCAGG 236
consensus_9204#3 TCGCATGGACAA-TTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGG 137
consensus_9204#0 TCGCATGGACAA-TTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGG 287
consensus_9204#1 CCACAAGAACAAATTCATCAGCAG-CAGCCTTGCCATCATGATCATT-ATGATCGTCGTC 229
* * ** * * * *** * * ** * ** * *
consensus_9204#2 ACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAA--ACGATTTCAATGGTCCCCCC 294
consensus_9204#3 ACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAA--ACGATTTCAATGGTCCCCCC 195
consensus_9204#0 ACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAA--ACGATTTCAATGGTCCCCCC 345
consensus_9204#1 GCT---ACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAG 286
* ** ** * * * ** * ** * * * ** * * * * ** **
consensus_9204#2 GGACAAC--CAATGATGCCA--AATAGTATGGATCC-GACGCGTCC-GGTGAAGCTGGAG 348
consensus_9204#3 GGACAAC--CAATGATGCCA--AATAGTATGGATCC-GACGCGGCAAGGTGAAGCTGGAG 250
consensus_9204#0 GGACAAC--CAATGATGCCA--AATAGTATGGATCC-GACGCG----------------- 383
consensus_9204#1 CAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGC 346
** * ** ** ** * * * * *****
consensus_9204#2 ACTTTGTAGCATGGCAAG---------GTATGGGTCCCATGAATCCTAGAATGAATCCAC 399
consensus_9204#3 ACTTTGTAGCATGGCAAGGCCCTCCAGGTATGGGTCCCATGAATCCTAGAATGAATCCAC 310
consensus_9204#0 -------------GCAAG---------GTATGGGTCCCATGAATCCTAGAATGAATCCAC 421
consensus_9204#1 AAACCAATGTGT-GCAATGGC----AAACCATGCTTCTGTAACAGCTGGTACCC-TCCCC 400
**** * * * * * ** * * *** *
consensus_9204#2 CTCGCGGCCCGGGCATGGGCCCCATGGGAGGGGGAACGTACGGTCCAGGAATGCGCGGTC 459
consensus_9204#3 CTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTC 370
consensus_9204#0 CTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTC 481
consensus_9204#1 CAAGTGGATTTTATTAATCACTCACCACCACCAGCA-GCACAA--CGACACCGATCGGTT 457
* * ** * ** * * * ** * * * ****
consensus_9204#2 CCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGG-CCGGCGGT 518
consensus_9204#3 CCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGGCCGGCGGT 430
consensus_9204#0 CCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGG-CCGGCGGT 540
consensus_9204#1 CACGAGTCA-CGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAA 516
* * * * * ** * **** ** * **** * * *
consensus_9204#2 CGGC--CAAAGTGGCAACCGAACACGT-CATCGCCGATGAA-ATACTCGTCGTCCTCGCC 574
consensus_9204#3 CGGC--CACAGTGGCAACCGAACACGT-CATCGCCGATGAA-CTACTCGTCGTCCTCGCC 486
consensus_9204#0 CGGC--CACAGTGGCAACCGAACACGT-CATCGCCGATGAA-CTACTCGTCGTCCTCGCC 596
consensus_9204#1 CGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATT 576
*** ** * * * ** * ** **** * ** * *
consensus_9204#2 CGGCAACTACGGCGGACCGCCGGG-ACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCA 633
consensus_9204#3 CGGCAACTACGGCGGACCGCCGGGGACCAAGCGGGGC----------------------- 523
consensus_9204#0 CGGCAACTACGGCGGACCGCCGGG-ACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCA 655
consensus_9204#1 GGAAGGATTAGGCGAAGAAGAAGA---AGAAAAAAACCTGCAAATAAGACTTGCTCTGCA 633
* * **** * * * *
consensus_9204#2 TGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAA--ACACCAATGAA 691
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 TGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAC--ACACCAATGAA 713
consensus_9204#1 GAGTGTGTGCGTGCGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGG 693
consensus_9204#2 ACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGG 751
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 ACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGG 773
consensus_9204#1 TTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACA 753
consensus_9204#2 CCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAG 811
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 CCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAG 833
consensus_9204#1 CACATTTTTACCAAAAAGAAGCAAAACTATAAAAAATATTACACAAAAAAAGAGAAAGAG 813
consensus_9204#2 CCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAA 871
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 CCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAA 893
consensus_9204#1 ACA-AAACAGAGCGAAAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGAG-GGAA 871
consensus_9204#2 CCTCGGCGGCTTCGGTGGTCCCGGCGAGAACG--TAAGTT---TCGACAATTTC------ 920
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 CCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGATCAAACCGAATCGGCCGCTATACTGAA 953
consensus_9204#1 AAACGTCAAACTGGTTGAGCATAATGATAGCAG--AAACAGAAAGGAAAAGAAAG----- 924
consensus_9204#2 --TAGTGACCAGTGTACTGCCA-ATGTACCTCTTCGCTCACATTGCCCCCACAACCACAA 977
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 AATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGA 1013
consensus_9204#1 ---GCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATA 981
consensus_9204#2 CCCTTC-ATTTTAACAACATTTTGCAACAACAACAACAACAACAACAA--AACAACCAAT 1034
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 CTACTA-TATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTT 1072
consensus_9204#1 AAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGAC 1041
consensus_9204#2 CGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTAT 1094
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 CTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATATCGTAAAGGCAATCTATACTA 1132
consensus_9204#1 AGAGAAGGGAGAAAAAGCACGAAGCTGATAG-AGAGAAAGAGAGAGAGAGAGGGACACTC 1100
consensus_9204#2 GATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCTTC 1154
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 GTACTACTTTTACCATTACCAGCACTATCACTATCGACAGCATTGGCAGCCTTGCCATCA 1192
consensus_9204#1 CTATACCCCCAATCAAGA--AGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCA 1158
consensus_9204#2 GTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTGCTGCACAATGCGAATTATTTTA-T 1213
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 TGATCATTATGATCGTCGTCGC-TACCACGATCGCCACTACCACTGGGCACTACTACT-A 1250
consensus_9204#1 AGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGA 1218
consensus_9204#2 CACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAGCTATTTAAATATTATCTTTC 1273
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 CTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACG 1310
consensus_9204#1 CGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATT 1278
consensus_9204#2 GATCAACGTGAGAAAGGCCGTGTCTTAAAGCTAGAATGTTAAACAAGTT------TTCAT 1327
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 CACGATGATCATCAGTGGCAAACCA-ATGTGTGCAATGGCAAACCATGC------TTC-T 1362
consensus_9204#1 CGTGTGCGTGACAGAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTC 1338
consensus_9204#2 TTTTAAATTGTTCACCTTTTCGCGTTGAAATCGATCCGTCACTTTGGGGGAGAAGCGAGT 1387
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 GTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGC-AGC 1421
consensus_9204#1 TTTCGAGTTACCAATCCATCTCCGATCGATTGCGCGTGGCAAAAGTTGCT-CTTTTAAGC 1397
consensus_9204#2 GCACGCACACAAATCGATTAA-AAACAACAC----------------------------- 1417
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 ACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGA 1481
consensus_9204#1 GACAAAATGCAAATTGTATGCCAAGAAAGGCTTAAAAAGGTGGCCCTCTTACACGTTGAG 1457
consensus_9204#2 ------------------------------------------------------------
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 TGCAAAACGAGTACCAAACGGTAT-CATCACGCTGTCTGTGTC-TGTACCCCGTTGATGC 1539
consensus_9204#1 CGGGAAGCATGTGTTTGGAAGAGTGTGAGGTGGTGTGTGTGTTGCGGACACAAACACAGA 1517
consensus_9204#2 ------------------------------------------------------------
consensus_9204#3 ------------------------------------------------------------
consensus_9204#0 GTCTGTATCTCACCACCATTGGAAGGATTATGCGAAGAAGAAGAAGAAAAAAACCTGCAA 1599
consensus_9204#1 ATAGGAATTTAAACCTC------------------------------------------- 1534
consensus_9204#2 ----------------
consensus_9204#3 ----------------
consensus_9204#0 ATAAGACTTGCTCTGC 1615
consensus_9204#1 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||