cluster # 9226

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Anopheles gambiae
cluster # 9226 cluster # 9226 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9226#0 length = 1113 sequences # 7
consensus_9226#1 length = 796 sequences # 3

consensus_9226#2 length = 762 sequences # 3
consensus_9226#3 length = 573 sequences # 1
consensus_9226#4 length = 327 sequences # 1

consensusID : consensus_9226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1113
fasta sequence

                              [GGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTAGTTGGTTACAACTGCAGTTTGTCAAGTTCCCTCCCAGCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAAGGAGGTTAACATAGAGGAGTGGGGTATGGGAAAGCAATGTAATGTAATGTAATGTAATGTAATGTAATGTGTACATGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTTTTGTTATAACCACAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAATAAACCTTTTACAATGTGTTTTGCTC--CTCTCTTTCCTTCTCTTTTTTTCATGAAACGGATTTCATTCTACTCTTATGTCTAAATCTTTTAC-TTCCTTTTTTGTTTTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCACTACGAACACGTGGTTTGCTTATATTTGCTCCAATGTGTATGCGTGGATGTGACACTCTGACACTCTCAGTAC--AAAAAAAACCTTTCCCCCGCTCAGAGT---GACAGAGCAAGATTCGAATGTGAACGACACGGAGGAAAGAGGGATAATTATTGCGAGTAAACAACACCAGGCCGC-AAACCGGAATCAGTTTACGCTTCGCGCCGATAAATCTTCTCCATTATCTTGAAGAACAGTTCGTGCGGAAGGCCGCGCGATATCTGCTGAATGTGCGTCTTGATCATGTTGTACGATTCCTCTTCGTAGATGCTGTAGGTGGTCGGCAGGCCGAGCTGCTCGTACAGCTTCTTCACGCGCGCAATGTTTTCCGGATCCGTCGATCCGTAGCACGCCTTCATCACTTCCTTCTGCTCCTCGGTCGCGCGCTGCATCGCGACCACCGCCAGCCAGCTGCACTTGCCCTCGGCAATGTCCGTACCGACCTTACCGATGACGGCCGGATCGCCGAAGCAGTCGAAGAAATCGTCCTGCGTCTGGTAGAACTGGCCAATCTCGAGCAGAATCGTTTTCGCCTGCCGCGG]

[-] EMBL BM625853             [GGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTAGTTGGTTACAACTGCAGTTTGTCAAGTTCCCTCCCAGCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAAGGAGGTTAACATAGAGGAGTGGGGTATGGGAAAGCAATGTAATGTAATGTAATGTAATGTAATGTAATGTGTACATGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTTTTGTTATAACCACAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAATAAACCTTTTACAATGTGTTTTGCTC  CTCTCTTTCCTTCTC TTTTTTCATGAAACGGATTTCATTCTACTCTTATGTCTAAATCTTTTAC TTCCTTTTTTGTTTTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCACTACGAACACGTGGTTTGCTTATATTTGCTCCAATGTGTATGCGTGGATGTGACACTCTGACACTCTCAGTAC  AAAAAAAACCTTTCCCCCGCTCAGAGT   GACAGAGCAAGATTCGAATGTGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AL930862             [                                                                                                                             CAGCTTGCGAATGGTAGTACTTGGTTACAATTGCAGTTTGTCAAGTTCTCTCCCAGCGGAGGAAACAAGTGTTGACAAACAGGAAAAAAGGAGGTTTACATAGAGGAGTGGGGTATGGGAAAGCAATGTAATGTAATGTAATG   TG   TG   TGTGTACATGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTTTTGTTATAACCACAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAATAAACCTTTTACAATGTGTTTTGCTCTTCTCTCTTTCCTTCTCTTTTTTTCATGAAACGGATTTCATTCTACTCTTATGTCTAAATCTTTTAC TTCCTTTTTTTTTGTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCACTACGAACACGTGGTTTGCTTATA TTGCTCCAATGTGTATGCGTGGAT TAAC CTCggggatct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BM627050             [                                                                                                                                                                                                                                                                                                                                                                                                                                   TC  CTCTCTCTCCTTCTCTTTTTTTCATGAAACGTATTTCATTCTACTCTTATGTCTAAATC   TACGTGCTTTTTTTGTTTTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCACTACGAACACGTGGTTTGCTTATATTTGCTCCAATGTGTATGCGTGGATGTGACACTCTGACACTCTCAGTACAAAAAAAAAACCTTTCCCCCGCTCAGAGT   GATGGAGCAAGATTCGAATGTGAACGACACGGAGGAAAGAGGGATAATTATTGCGAGTAAACAACACCAGGCCGCAAAACCGGAACCAGTTTACGCTTCGCGCCGATAAATCTTCTCCATTATCTTGAAGAACAGTTCGTGCGGAAGGCCGCGCGATATCTGCTGAATGTGCGTCTTGATCATGTTGTACGATTCCTCCTCATAGATGCTGTAGGTGGTCGGCAGGCCGAGCTGCTCGTACAGCTTCTTCACGCGCGCAATGTTTTCCGGATCCGTCGATCCGTAGCACGCCTTCATCACTTCCTTCTGCTCCTCGGTCGCGCGCTGCATCGCGACCACCGCCAGCCAGCTGCACTTGCCCTCGGCAATGTCCGTACCGACCTTACCGATGACGGCCGGATCGCCGAAGCAGTCGAAGAAATCGTCCTGCGTCTGGTAGAACTGGCCAATCTCGAGCAGAATCGTTTTCGCCTGCCGCGG]
[+] EMBL AGA284545            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTTTTTTTGAAAGATTTTCTAAAAATCCTTCACTACGAACACGTGGTTTGCTTAAATTTGCCCCAATGTGTATGCGTGGATGTGACACTCTGACACTCTCAGTAC    AAAAAACCTTTCCCCCGCTCAAAGTGACGACAGAGCAAGATTCGAATGTGAACGACACGGGGGAAAGAGGGATAATTATTGCGAGTAAACAACACCAGGCCGC AAACCGGAATCAGTTTACGCTTCGCGCCGATAAATCTTCTCCATTATCTTGAAAAACAGTTCGTGCGGAAGGCCGCGCCATATCTGCTGAATGTGCGTCTTGATCAT                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BM589218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTGCTTATATTTGCTCCAATGTGTATGCGTGGATGTGACACTCTGACACTCTCAGTAC  AAAAAAAACCTTTCCCCCGCTCAGAGT   GACAGAGCAAGATTTGAATGTGAACGACACGGAGGAAGGAGGGATAATTATTGCGAGTAAACAACACCAGGCCGC AAACCGGAATCAGTTTACGCTTCGCGCCGATAAATCTTCTCCATTATCTTGAAGAACAGTTCGTGCGGAAGGCCGCGCGATATCTGCgg                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AGA282510            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAGTGACGACAGAGCAAGATTCGAATGTGAACGACACGGAGGAAAGAGGGATAATTATTGCGAGTAAACAACACCAGGCCGC AAACCGGAATCAGTTTACGCTTCGCGCCGATAAATCTTCTCCATTATCTTGAAGAACAGTTCGTGCGGAAGGCCGCGCGATATCTGCTGAATGTGCGTCTTGATCATGTTGTACGATTCCTCTTCGTAGATGCTGTAGGTGGTCGGCAGGCCGAGCTGCTCGTACAGCTTCTTCACGCGCGCAATGTTTTCCGGATCCGTCGATCCGTAGCACGCCTTCATCACTTCCTTCTGCTCCTCGGTCGCGCGCTGCATCGCGACCACCGCCAGCCAGCTGCACTTGCCCTCGGCAATGTCCGTACCGACCTTGCCGATGACGGCCGGATCGCCAAAGCAGTCGAAGAAATCGTCCTGCGTCTGGTAGAACTGGCCAATCTC                           ]
[-] EMBL BX614108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCCGCGCGATTTCTGCTGAATGTGCGTCTTGATCATGTTGTACGATTCCTCTTCGTAGATGCTGTAGGTGGTCGGCCGGCCGAGCTGCTCGTACAGCTTCT                                                                                                                                                                                                                                        ]




>consensus_9226#0
GGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGATGAATGCTCATC
GCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAA
TGCAGCAGCTTGCGAATGGTAGTAGTTGGTTACAACTGCAGTTTGTCAAGTTCCCTCCCA
GCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAAGGAGGTTAACATAGAGGAGTGGGGTA
TGGGAAAGCAATGTAATGTAATGTAATGTAATGTAATGTAATGTGTACATGTTTTGTGTA
ACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTTTTGTTATAACCACAATCACAATC
TTTACCCTAAACAGGTGGATTTTCACATTATCCAATAAACCTTTTACAATGTGTTTTGCT
CCTCTCTTTCCTTCTCTTTTTTTCATGAAACGGATTTCATTCTACTCTTATGTCTAAATC
TTTTACTTCCTTTTTTGTTTTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCACTACGA
ACACGTGGTTTGCTTATATTTGCTCCAATGTGTATGCGTGGATGTGACACTCTGACACTC
TCAGTACAAAAAAAACCTTTCCCCCGCTCAGAGTGACAGAGCAAGATTCGAATGTGAACG
ACACGGAGGAAAGAGGGATAATTATTGCGAGTAAACAACACCAGGCCGCAAACCGGAATC
AGTTTACGCTTCGCGCCGATAAATCTTCTCCATTATCTTGAAGAACAGTTCGTGCGGAAG
GCCGCGCGATATCTGCTGAATGTGCGTCTTGATCATGTTGTACGATTCCTCTTCGTAGAT
GCTGTAGGTGGTCGGCAGGCCGAGCTGCTCGTACAGCTTCTTCACGCGCGCAATGTTTTC
CGGATCCGTCGATCCGTAGCACGCCTTCATCACTTCCTTCTGCTCCTCGGTCGCGCGCTG
CATCGCGACCACCGCCAGCCAGCTGCACTTGCCCTCGGCAATGTCCGTACCGACCTTACC
GATGACGGCCGGATCGCCGAAGCAGTCGAAGAAATCGTCCTGCGTCTGGTAGAACTGGCC
AATCTCGAGCAGAATCGTTTTCGCCTGCCGCGG

consensusID : consensus_9226#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 796
fasta sequence

                              [AATTNACACGAGGTCATCCATTCCTTTACCCTTTACCCCGGGTGTACCCGTAAGTGAAGGTACATACATCCCATACATCCCACTACCTAGTACTATCACTACTCCACACCCCCCATTCCGCATTAACATGATTCCGATGTTCTGTGCGCAAGAGAAAGAGCAGCAGGAACTCATAACGATTCACGGTAACGAACGCATTGAGCATGAGCATTGCAAACGAAACAAAAACCCAACAAACAGGAAGGAGACACACATTGCACACAGAAACAGTCAGTTGTGAGATGAAATTGGAGCTGAATGGAGAGAAATGCGTACTAATAATAATACACTAATCAACAGTAGCATTCTTAAGCGGCTCTTTATGTCTCAATGCACACAGAGAGGGTCTGTCTGTCTGAAGAGTGTGTCTNCCTGAAGCAAACAAAGGGAAGCAAATGGAACAATTGTACACGCCGA-TGCAGGTTGGTAAAGAGTGCAGAAGTGCAGCAGCAAAGTTAGAAAAGGAGAGATAAAGCTACACAGACGACAGCTCAGAGGAAAGCGATGGTTTCCCATACAGCTATAGAGTATATGGGACGCATAATGATAATAACGGATTGAAAAGGGCCAGTAGGCTCAAAGTCTCTATAAAAAAATTAAAAACAATAAAAAAAGAGATATGCATTGAAATTGAAAATGGTGAAACGAGCGTGTGGTAAAGGATCAGTGAACTTAGGGATTAGTGAAGCATTATGTTTTCTTATTATAAAAAATAATTATTAATAAAAGCAAGAAACTTTGTAAAAATGTTAACCCC]

[+] EMBL AL932423             [AATTNACACGAGGTCATCCATTCCTTTACCCTTTACCCCGGGTGTACCCGTAAGTGAAGGTACATACATCCCATACATCCCACTACCTAGTACTATCACTACTCCACACCCCCCATTCCGCATTAACATGATTCCGATGTTCTGTGCGCAAGAGAAAGAGCAGCAGGAACTCATAACGATTCACGGTAACGAACGCATTGAGCATGAGCATTGCAAACGAAACAAAAACCCAACAAACAGGAAGGAGACACACATTGCACACAGAAACAGTCAGTTGTGAGATGAAATTGGAGCTGAATGGAGAGAAATGCGTACTAATAATAATACACTAATCAACAGTAGCATTCTTAAGCGGCTCTTTATGTCTCAATGCACACAGAGAGGGTCTGTCTGTCTGAAGAGTGTGTCTNCCTGAAGCAAACAAAGGGAAGCAAATGGAACAATTGTACACGCCGA TGCAGGTTGGTAAAGAGTGCAGAAGTGCAGCAGCAAAGTTAGAAAAGGAGAGATAAAGCTACACAGACGACAGCTCAGAGGAAAGCGA                                                                                                                                                                                                                                                            ]
[+] EMBL BX625020             [                   ATTCCTTTACCCTTTACCCCGGGTGTACCCGTAAGTGAAGGTACATACATCCCATACATCCCACTACCTAGTACTATCACTACTCCACACCCCCCATTCCGCATTAACATGATTCCGATGTTCTGTGCGCAAGAGAAAGAGCAGCAGGAACTCATAACGATTCACGGTAACGAACGCATTGAGCATGAGCATTGCAAACGAAACAAAAACCCAACAAACAGGAAGGAGACACACATTGCACACAGAAACAGTCAGTTGTGAGATGAAATTGGAGCTGAATGGAGAGAAATGCGTACTAATAATAATA A TAATCAACAGTAGCATT TTAAGCGGCTCTTTATGTCTCAATGCACACAGAGAGGGTCTGTCTGTCTGAAGAGTGTGTCTTCCTGAAGCAAA AAAGGGAAGCAAATGGAACAATTGTACACGCCGATTGCAGGTTGGTAAAGAGTGCAGAAGTGCAGCAGCAAAGTTAGAAAAGGAGAGATAAAGCTACACAGACGACAG TCAGAGGAAAGCGATGGTTTCCCATACAGCTATAGAGTATATGGGACGCATAATGATAATAACGGATTGAAAAGGGCCAGTAGGCTCAAAGTCTCTATAAAAAAATTAAAAACAATAAAAAAAGAGATATGCATTGAAATTGAAAATGGTGAAACGAGCGTGTGGTAAAGGATCAGTGAACTTAGGGATTAGTGAAGCATTATGTTTTCTTA                                                      ]
[+] EMBL BM616516             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgAGCGATGGTTCCCCATACAGCTGTAGAGTATATGGGACGCATAATGATAATAATGGATTGAAAAGGGCCAGTAGGCTCAAAGTCTCTATAAAAAAAATAAAAACAATAAAAAAA AGATATGAATTGAAATTGAAAATGATGAAACGAGCGTGTGGTAAAGGATCAGTGAAATTAAGGATTAGTGAAGCATTATGTTTTCTTATTATAAAAAATAATTATTAATAAAAGCAAGAAACTTTGTAAAAATGTTAACCCC]




>consensus_9226#1
AATTNACACGAGGTCATCCATTCCTTTACCCTTTACCCCGGGTGTACCCGTAAGTGAAGG
TACATACATCCCATACATCCCACTACCTAGTACTATCACTACTCCACACCCCCCATTCCG
CATTAACATGATTCCGATGTTCTGTGCGCAAGAGAAAGAGCAGCAGGAACTCATAACGAT
TCACGGTAACGAACGCATTGAGCATGAGCATTGCAAACGAAACAAAAACCCAACAAACAG
GAAGGAGACACACATTGCACACAGAAACAGTCAGTTGTGAGATGAAATTGGAGCTGAATG
GAGAGAAATGCGTACTAATAATAATACACTAATCAACAGTAGCATTCTTAAGCGGCTCTT
TATGTCTCAATGCACACAGAGAGGGTCTGTCTGTCTGAAGAGTGTGTCTNCCTGAAGCAA
ACAAAGGGAAGCAAATGGAACAATTGTACACGCCGATGCAGGTTGGTAAAGAGTGCAGAA
GTGCAGCAGCAAAGTTAGAAAAGGAGAGATAAAGCTACACAGACGACAGCTCAGAGGAAA
GCGATGGTTTCCCATACAGCTATAGAGTATATGGGACGCATAATGATAATAACGGATTGA
AAAGGGCCAGTAGGCTCAAAGTCTCTATAAAAAAATTAAAAACAATAAAAAAAGAGATAT
GCATTGAAATTGAAAATGGTGAAACGAGCGTGTGGTAAAGGATCAGTGAACTTAGGGATT
AGTGAAGCATTATGTTTTCTTATTATAAAAAATAATTATTAATAAAAGCAAGAAACTTTG
TAAAAATGTTAACCCC

consensusID : consensus_9226#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 762
fasta sequence

                              [TCAATCCATTATTATCATTATGTGTCCCATATACTCTACAGCTGTATCGGGAACCATCGCTTTCCTCTGACTGTCGTCTGTGTAGCTTTATCTCCCCTTTTCTAACATTGCTGCTGCACTTCTGCACTCTTTACCAACCGGCAATCGGCGTGTACAATTGTTCCATTTCCACACTGTTTTGTTCCACACTGACCCTCTTTATACCCACCACACTTTTTCAATCTCTGTGCTTTAAAGTGCCGCTTAAAATGCTACAGTTGATTATTATTATGATTAGTACGTATTTCTCTCCATTCGGCTCCAATTTCTTCACCCAACTGCCTGTTTCTGTGTGCAATGTGTGTCTCCTTCCTGTTTGTGGGGTTTTTGTTTCGTTTGCAATGCTCATGCTCAATGCGTTCGTTACCGTGAATCGTTATGAGTTCCTGCTGCTCTTTCTCTTGCGCACAGAACATCGGAATCATGTTGATGCGGAATGGGGCGTGTGGAGTAGTGATAGTACTAGGTAGTGGGATGTATGTGGGATGTATGTACCTTCTACTTACGGGTACGCCCGTAAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACTCACGCTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTACTTGGTTACAATTGCAGTTTGTCAAGTTCTCTCCCAGCGGAGGAAACAAGTGTTGACAAACAGGAAAAAAGGAGGTTTACATAGAGGAGTGGGGTATGG]

[-] EMBL BX615802             [TCAATCCATTATTATCATTATGTGTCCCATATACTCTACAGCTGTATCGGGAACCATCGCTTTCCTCTGACTGTCGTCTGTGTAGCTTTATCTCCCCTTTTCTAACATTGCTGCTGCACTTCTGCACTCTTTACCAACCGGCAATCGGCGTGTACAATTGTTCCATTTCCACACTGTTTTGTTCCACACTGACCCTCTTTATACCCACCACACTTTTTCAATCTCTGTGCTTTAAAGTGCCGCTTAAAATGCTACAGTTGATTATTATTATGATTAGTACGTATTTCTCTCCATTCGGCTCCAATTTCTTCACCCAACTGCCTGTTTCTGTGTGCAATGTGTGTCTCCTTCCTGTTTGTGGGGTTTTTGTTTCGTTTGCAATGCTCATGCTCAATGCGTTCGTTACCGTGAATCGTTATGAGTTCCTGCTGCTCTTTCTCTTGCGCACAGAACATCGGAATCATGTTGATGCGGAATGGGGCGTGTGGAGTAGTGATAGTACTAGGTAGTGGGATGTATGTGGGATGTATGTACCTTCTACTTACGGGTACGCC                                                                                                                                                                                                                ]
[-] EMBL BX627457             [                                                                                                                                             CAATCGGCGTGTACAATTGTTCCATTTCCACACTGTTTTGTTCCACACTGACCNTCTTTATACCCACCACACTTTTTCAATCTCTGTGCTTTAAAGTGCCGCTTAAAATGCTACAGTTGATTATTATTATGATTAGTACGTATTTCTCTCCATTCGGCTCCAATTTCTTCACCCAACTGCCTGTTTCTGTGTGCAATGTGTGTCTCCTTCCTGTTTGTGGGGTTTTTGTTTCGTTTGCAATGCTCATGCTCAATGCGTTCGTTACCGTGAATCGTTATGAGTTCCTGCTGCTCTTTCTCTTGCGCACAGAACATCGGAATCATGTTGATGCGGAATGGGGCGTGTGGAGTAGTGATAGTACTAGGTAGTGGGATGTATGTGGGATGTATGTACCTTCTACTTACGGGTACGCCCGTAAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACTCACGCTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTACTTGGTTACAATTGCAGTTTGTCAAGTTCTCTCCCAGCGGAGGAAACAAGTGTTGACAAACAGGAAAAAAGGAGGTTTACATAGAGGAGTGGGGTATGG]
[-] EMBL BX610328             [                                                                                                                                                                                                                                                                                                                                                                                                                     CCGTGAATCGTTATGAGTTCCTGCTGCTCTTTCTCTTGCGCACAGAACATCGGAATCATGTTGATGCGGAATGGGGCGTGTGGAGTAGTGATAGTACTAGGTAGTGGGATGTATGTGGGATGTATGTACCTTCTACTTACGGGTACGCCCGTAAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACTCACGCTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTACTTGGTTACAATTGCAGTTTGTCAAGTTCTCTCCCAGCGGAGGAAACAAGTGTTG                                            ]




>consensus_9226#2
TCAATCCATTATTATCATTATGTGTCCCATATACTCTACAGCTGTATCGGGAACCATCGC
TTTCCTCTGACTGTCGTCTGTGTAGCTTTATCTCCCCTTTTCTAACATTGCTGCTGCACT
TCTGCACTCTTTACCAACCGGCAATCGGCGTGTACAATTGTTCCATTTCCACACTGTTTT
GTTCCACACTGACCCTCTTTATACCCACCACACTTTTTCAATCTCTGTGCTTTAAAGTGC
CGCTTAAAATGCTACAGTTGATTATTATTATGATTAGTACGTATTTCTCTCCATTCGGCT
CCAATTTCTTCACCCAACTGCCTGTTTCTGTGTGCAATGTGTGTCTCCTTCCTGTTTGTG
GGGTTTTTGTTTCGTTTGCAATGCTCATGCTCAATGCGTTCGTTACCGTGAATCGTTATG
AGTTCCTGCTGCTCTTTCTCTTGCGCACAGAACATCGGAATCATGTTGATGCGGAATGGG
GCGTGTGGAGTAGTGATAGTACTAGGTAGTGGGATGTATGTGGGATGTATGTACCTTCTA
CTTACGGGTACGCCCGTAAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACTCAC
GCTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTA
GTACTTGGTTACAATTGCAGTTTGTCAAGTTCTCTCCCAGCGGAGGAAACAAGTGTTGAC
AAACAGGAAAAAAGGAGGTTTACATAGAGGAGTGGGGTATGG

consensusID : consensus_9226#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence

                              [GTGATAGTACTAGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTAGTTGGTTACAACTGCAGTTTGTCAAGTTCCCTCCCAGCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAAGGAGGTTAACATAGAGGAGTGGGGTATGGGAAAGCAATGTAATGTAATGTAATGTAATGTAATGTAATGTGTACATGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTTTTGTTATAACCACAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAATAAACCTTTTACAATGTGTTTTGCTCCTCTCTTTCCTTCTCTTTTTTCATGAAACGGATTTCATTCTACTCTTATGTCTAAATCTTTTACTTCCTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCACCGGACGCGTGGGCGG]

[-] EMBL BM578027             [GTGATAGTACTAGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTAGTTGGTTACAACTGCAGTTTGTCAAGTTCCCTCCCAGCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAAGGAGGTTAACATAGAGGAGTGGGGTATGGGAAAGCAATGTAATGTAATGTAATGTAATGTAATGTAATGTGTACATGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTTTTGTTATAACCACAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAATAAACCTTTTACAATGTGTTTTGCTCCTCTCTTTCCTTCTCTTTTTTCATGAAACGGATTTCATTCTACTCTTATGTCTAAATCTTTTACTTCCTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCACCGGACGCGTGGGCGG]




>consensus_9226#3
GTGATAGTACTAGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGAT
GAATGCTCATCGCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACCCAT
CTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTAGTTGGTTACAACTGCAGTTTGTCAA
GTTCCCTCCCAGCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAAGGAGGTTAACATAGA
GGAGTGGGGTATGGGAAAGCAATGTAATGTAATGTAATGTAATGTAATGTAATGTGTACA
TGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTTTTGTTATAACCA
CAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAATAAACCTTTTACAA
TGTGTTTTGCTCCTCTCTTTCCTTCTCTTTTTTCATGAAACGGATTTCATTCTACTCTTA
TGTCTAAATCTTTTACTTCCTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAGAT
TTTCTAAAAATCCTTCACCGGACGCGTGGGCGG

consensusID : consensus_9226#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 327
fasta sequence

                              [GCAAGAATCCGCACGAGGGAAATACGTACTAATCATAATAATAATCAACTGTAGCATTTTAAGCGGCACTTTAAAGCACAGAGATTGAAAAAGTGTGGTGGGTATAAAGAGGGTCAGTGTGGAACAAAACAGTGTGGAAATGGAACAATTGTACACGCCGATTGCCGGTTGGTAAAGAGTGCAGAAGTGCAGCAGCAATGTTAGAAAAGGGGAGATAAAGCTACACAGACGACAGTCAGAGGAAAGCGATGGTTCCCGATACAGCTGTAGAGTATATGGGACACATAATGATAATAATGGATTGAAAAGGGCCGGTAGGCTCAAAGT]

[+] EMBL BX468784             [GCAAGAATCCGCACGAGGGAAATACGTACTAATCATAATAATAATCAACTGTAGCATTTTAAGCGGCACTTTAAAGCACAGAGATTGAAAAAGTGTGGTGGGTATAAAGAGGGTCAGTGTGGAACAAAACAGTGTGGAAATGGAACAATTGTACACGCCGATTGCCGGTTGGTAAAGAGTGCAGAAGTGCAGCAGCAATGTTAGAAAAGGGGAGATAAAGCTACACAGACGACAGTCAGAGGAAAGCGATGGTTCCCGATACAGCTGTAGAGTATATGGGACACATAATGATAATAATGGATTGAAAAGGGCCGGTAGGCTCAAAGT]




>consensus_9226#4
GCAAGAATCCGCACGAGGGAAATACGTACTAATCATAATAATAATCAACTGTAGCATTTT
AAGCGGCACTTTAAAGCACAGAGATTGAAAAAGTGTGGTGGGTATAAAGAGGGTCAGTGT
GGAACAAAACAGTGTGGAAATGGAACAATTGTACACGCCGATTGCCGGTTGGTAAAGAGT
GCAGAAGTGCAGCAGCAATGTTAGAAAAGGGGAGATAAAGCTACACAGACGACAGTCAGA
GGAAAGCGATGGTTCCCGATACAGCTGTAGAGTATATGGGACACATAATGATAATAATGG
ATTGAAAAGGGCCGGTAGGCTCAAAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9226#0      -----------GGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGAT 49
consensus_9226#3      GTGATAGTACTAGGTAGTAGGATGTATGGGATGCCCGGGCATGCCCGTCAAGGAATGGAT 60
consensus_9226#2      ------------------------------------------------------------
consensus_9226#1      ------------------------------------------------------------
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      GAATGCTCATCGCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACC-CA 108
consensus_9226#3      GAATGCTCATCGCTCTGTGACCCCAACGGCACGGTCCGTCTGTATTAAGTATACACC-CA 119
consensus_9226#2      --------------------TCAATCCATTATTATCATTATGTGTCCCATATACTCTACA 40
consensus_9226#1      ------------------AATTNACACGAGGTCATCCATTCCTTTACCCTTTACCCCGGG 42
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      TCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAG---TAGTTGGTTACAACTGCAGTTTG 165
consensus_9226#3      TCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAG---TAGTTGGTTACAACTGCAGTTTG 176
consensus_9226#2      GCTGTATCGGGAACCATC-GCTTTCCTCTGACTG---TCGTCTGT-------GTAGCTTT 89
consensus_9226#1      TGTACCCGTAAGTGAAGGTACATACATCCCATACATCCCACTACCTAGTACTATCACTAC 102
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      TCAAGTTCCCTCCCAGCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAA-GGAGGTTAAC 224
consensus_9226#3      TCAAGTTCCCTCCCAGCGCGGGAAGTAAGTGTTGACAAACGGGAAAAAA-GGAGGTTAAC 235
consensus_9226#2      ATCTCCCCTTTTCTAACATTGCTGCTGCACTTCTGCACTCTTTACCAACCGGCAATCGGC 149
consensus_9226#1      TCCACACCCCCCATTCCGCATTAACATGATTCCGATGTTCTGTGCGCAAGAGAAAGAGCA 162
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      ATAGAGGAGTGGGGTATGGGAAAGCAATGTA-ATGTAATGTAATGTAATGTAATGTAATG 283
consensus_9226#3      ATAGAGGAGTGGGGTATGGGAAAGCAATGTA-ATGTAATGTAATGTAATGTAATGTAATG 294
consensus_9226#2      GTGTACAATTGTTCCATTTCCA--CACTGTT-TTGTTCCACACTGACCCTCTTTATACCC 206
consensus_9226#1      GCAGGAACTCATAACGATTCACGGTAACGAACGCATTGAGCATGAGCATTGCAAACGAAA 222
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      TGTACATGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTT--TTGT 341
consensus_9226#3      TGTACATGTTTTGTGTAACAATTCTTCTCTCATGCTTAATAAAATCCTACTTTT--TTGT 352
consensus_9226#2      ACCACACTTTTTCAATCTCTGTGCTT-TAAAGTGCCGCTTAAAATGCTACAGTTGATTAT 265
consensus_9226#1      CAAAAACCCAACAAACAGGAAGGAGACACACATTGCACACAGAAACAGTCAGTTGTGAGA 282
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      TATAACCACAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAAT--AAA 399
consensus_9226#3      TATAACCACAATCACAATCTTTACCCTAAACAGGTGGATTTTCACATTATCCAAT--AAA 410
consensus_9226#2      TATTATGATTAGTACGTATTTCTCTCCATTCGGCTCCAATTTCT--TCACCCAAC--TGC 321
consensus_9226#1      TGAAATTGGAGCTGAATGGAGAGAAATGCGTACTAATAATAATACACTAATCAACAGTAG 342
consensus_9226#4      ----GCAAGAATCCGCACGAGGGAAATACGTACTAATCATAATAA--TAATCAACTGTAG 54
                                                             *        *  ***      

consensus_9226#0      CCTTTT------ACAATGTGTTTTGCTCCTCTCTTTCC-----TTCTCTTTTTTTCATGA 448
consensus_9226#3      CCTTTT------ACAATGTGTTTTGCTCCTCTCTTTCC-----TTCTCTTTTTT-CATGA 458
consensus_9226#2      CTGTTTCTGTGTGCAATGTGTGTCTCCTTCCTGTTTGTGGGGTTTTTGTTTCGTTTGCAA 381
consensus_9226#1      CATTCTTAAGCGGCTCTTTATGTCTCAATGCACACAGAGAGGGTCTGTCTGTCTGAAGAG 402
consensus_9226#4      CATT-TTAAGCGGCACTTTAAAGCACAG---AGATTGAAAAAGTGTGG-TGGGTATAAAG 109
                      *  * *       *  * *      *                 *     *   *      

consensus_9226#0      AACGGAT-TTCATTCTACTCTTATGTCTAAATCTTTTACTTCCTTTTTTGTTTTTTTTTT 507
consensus_9226#3      AACGGAT-TTCATTCTACTCTTATGTCTAAATCTTTTACTTCCTTTTTTGTTTTTTTTTT 517
consensus_9226#2      TGCTCATGCTCAATGCGTTCGTTACCGTGAATCGTTATGAGTTCCTGCTGCTCTTTCTCT 441
consensus_9226#1      TGTGTCTNCCTGAAGCAAACAAAGGGAAGCAAATGGAACAATTGTACACGCCGAT-GCAG 461
consensus_9226#4      AGGGTCAGTGTGGAACAA--AACAGTGTGGAAATGGAACAATTGTACACGCCGATTGCCG 167
                                                    *                  *    *     

consensus_9226#0      TTT-------------GAAAGATTTTCTAAAAATCCTTCACTACGAACACG-TGGTTTGC 553
consensus_9226#3      TTTTTTTTTTTTTTTTGAAAGATTTTCTAAAAATCCTTCAC--CGGACGCG-TGGGCGG- 573
consensus_9226#2      TGCG------------CACAGAACATCGGAATCATGTTGATGCGGAATGGGGCGTGTGGA 489
consensus_9226#1      GTTGGTAAAGA----GTGCAGAAGTGCAGCAGCAAAGTTA---GAAAAGGAGAGATAAAG 514
consensus_9226#4      GTTGGTAAAGA----GTGCAGAAGTGCAGCAGCAATGTTA---GAAAAGGGGAGATAAAG 220
                                         ***    *   *      * *      *      *      

consensus_9226#0      TTATATTTGCTCCAATGTGTATGCGTGGATGTGACACTCTGACACTCTCAGTACAAAAAA 613
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      GTAGTGATAGTACTAGGTAGTGGGATGTATGTGGGATGTATGTACCTTCTACTTACGGGT 549
consensus_9226#1      CTACACAGACGACAGCTCAGAGGAAAGCGATGGTTTCCCATACAGCTATAGAGTATATGG 574
consensus_9226#4      CTACACAGACGACAG-TCAGAGGAAAGCGATGGTTCCCGATACAGCTGTAGAGTATATGG 279
                                                                                  

consensus_9226#0      AACCTTTCCCCCGCTCAGAGTGACAGAGCAAGATTCGAATGTGAACGACACGGAGGAAAG 673
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      A----CGCCCGTAAAGGAATGGATGAATGCTCATCGCTCTGTGACCCCAACTCACGCTCC 605
consensus_9226#1      G-----ACGCATAATGATAATAACGGATTGAAAAGGGCCAGTAGGCTCAA---AGTCTCT 626
consensus_9226#4      G-----ACACATAATGATAATAATGGATTGAAAAGGGCCGGTAGGCTCAA---AGT---- 327
                                                                                  

consensus_9226#0      AGGGATAATTATTGCGAGTAAACAACACCAGGCCGCAAACCGGAATCAGTTTACGCTTCG 733
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      GTCTGTATTAAGTATACACCCATCTCGCTCGAAATGCAGCAGCTTGCGAATGGTAGTACT 665
consensus_9226#1      ATAAAAAAATTAAAAACAATAAAAAAAGAGATATGCATTGAAATTGAAAATGGTGAAACG 686
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      CGCCGATAAATCTTCTCCATTATCTTGAAGAACAGTTCGTGCGGAAGGCCGCGCGATATC 793
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      TGGTTACAATTGCAGTTTGTCAAGTTCTCTCCCAGCGGAGGAAACAAGTGTTGACAAACA 725
consensus_9226#1      AGCGTGTGGTAAAGGATCAGTGAACTTAGGGATTAGTGAAGCATTATGTTTTCTTATTAT 746
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      TGCTGAATGTGCGTCTTGATCATGTTGTACGATTCCTCTTCGTAGATGCTGTAGGTGGTC 853
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      GGAAAAAAGGAGGTTTACATAGAGGAGTGGGGTATGG----------------------- 762
consensus_9226#1      AAAAAATAATTATTAATAAAAGCAAGAAACTTTGTAAAAATGTTAACCCC---------- 796
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      GGCAGGCCGAGCTGCTCGTACAGCTTCTTCACGCGCGCAATGTTTTCCGGATCCGTCGAT 913
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      ------------------------------------------------------------
consensus_9226#1      ------------------------------------------------------------
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      CCGTAGCACGCCTTCATCACTTCCTTCTGCTCCTCGGTCGCGCGCTGCATCGCGACCACC 973
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      ------------------------------------------------------------
consensus_9226#1      ------------------------------------------------------------
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      GCCAGCCAGCTGCACTTGCCCTCGGCAATGTCCGTACCGACCTTACCGATGACGGCCGGA 1033
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      ------------------------------------------------------------
consensus_9226#1      ------------------------------------------------------------
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      TCGCCGAAGCAGTCGAAGAAATCGTCCTGCGTCTGGTAGAACTGGCCAATCTCGAGCAGA 1093
consensus_9226#3      ------------------------------------------------------------
consensus_9226#2      ------------------------------------------------------------
consensus_9226#1      ------------------------------------------------------------
consensus_9226#4      ------------------------------------------------------------
                                                                                  

consensus_9226#0      ATCGTTTTCGCCTGCCGCGG 1113
consensus_9226#3      --------------------
consensus_9226#2      --------------------
consensus_9226#1      --------------------
consensus_9226#4      --------------------