cluster # 9228

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Anopheles gambiae
cluster # 9228 cluster # 9228 Sequences # 15 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9228#0 length = 1456 sequences # 5
consensus_9228#1 length = 736 sequences # 2
consensus_9228#2 length = 709 sequences # 4

consensus_9228#3 length = 698 sequences # 1
consensus_9228#4 length = 494 sequences # 1
consensus_9228#5 length = 450 sequences # 1
consensus_9228#6 length = 441 sequences # 1

consensusID : consensus_9228#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1456
fasta sequence

                              [CTTTAACAAAGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCCTTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTCACCCAGTGTTGTCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTACAAGAGTGTGTGTGTGTTTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGCAAGCAGATCAAGCTACAGATCTGGGACACGGCCGGCCAGGAAGCGTTCCGGTCGATCACCCGCTCGTACTACCGCGGCGCGGCCGGGGCCCTGCTCGTGTACGACATTACGCGCCGCGAAACGTTCAACCACCTGACCACCTGGCTGGAGGACGCCCGGCAACACTCGAACTCGAATATGGTCATTATGCTGATCGGCAATAAGAGTGATCTTGATTCACGCCGCGAGGTGAAGAAAGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGTCGAGGAAGCGTTCATCAACACGGCGAAGGAGATCTACGAAAAGATTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCGGGCGGACCGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATGATGTGCAATGCCGTGCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCTGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGCTACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGAAGAGATATGGTATAAACAAAGTTGGGGCTGCTTTTCCTTTCCCCTTCCCTCTATTACATTAGCTATTGCAAAAACAAAAACA]

[+] EMBL BX605115             [CTTTAACAAAGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCCTTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTCACCCAGTGTTGTCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTACAAGAGTGTGTGTGTGTTTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGCAAGCAGATCAAGCTACAGATCTGGGACACGGCCGGCCAGGAAGCGTTCCGGTCGATCACCCGCTCGTACTACCGCGGCGCGGCCGGGGCCCTGCTCGTGTACGACATTACGCGCCGCGAAACGTTCAACCACCTGACCACCTGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX602159             [                                                                                                                    TGTTGTCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAATGTC  GTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGCAAGCAGATCAAGCTACAGATCTGGGACACGGCCGGCCAGGAAGCGTTCCGGTCGACCACCCGCTCGTACTACCGCGGCGCGGCCGGGGCCCTGCTCGTGTACGACATTACGCGCCGCGAAACGTTCAACCACCTGACCACCTGGCTGGAGGACGCCCGGCAACACTCGAACTCGAATATGGTCATTATGCTGATCGGCAATAAGAGTGATCTTGATTCACGCCGCGAGGTGAAGAAAGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX608976             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTTGATTCACGCCGCGAGGTGAAGAAGGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGTCGAGGAAGCGTTCATCAACACGGCGAAGGAGATCTACGAAAAGATTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCGGGCGGACCGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATGATGTGCAATGCCGTGCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCTGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGCTACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGAAGAGATATGGTATAAACAAAGTTGGGGCTGCTTTTCCTTTCCCCTTCCCTCTATTACAT                       ]
[-] EMBL AGA281337            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGGAAGCGTTCATCAACACGGCGAAGGAAATCTACGAAAAGATTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCGGGCGGACCGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATGATGTGCAATGCCGTGCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCGGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGCTACACAACCGAAGGCGATCAACTGGGGAGAGAAACAGGAAGAGATATGGAATAAACAAAGTTGGGGCTGCTTTTCCTTTCCCCTTCCCTCTATTACATTAGCTATTGCAAAAACAAAAACA]
[+] EMBL BX617193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAAGGAGATCTACGAAAAGATTCAGGAGGGGGTATTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCGGGCGGACCGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATGATGTGCAATGCCGTGCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCATGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACC                                                                                                                                                                                                  ]




>consensus_9228#0
CTTTAACAAAGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTT
CCCCCTTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTCACCCAGTGTT
GTCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCC
AAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTAC
AAGAGTGTGTGTGTGTTTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGT
GTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCACCACCATCAT
CATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCT
TACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTG
CAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGT
GCGCGCATGATCACCATCGACGGCAAGCAGATCAAGCTACAGATCTGGGACACGGCCGGC
CAGGAAGCGTTCCGGTCGATCACCCGCTCGTACTACCGCGGCGCGGCCGGGGCCCTGCTC
GTGTACGACATTACGCGCCGCGAAACGTTCAACCACCTGACCACCTGGCTGGAGGACGCC
CGGCAACACTCGAACTCGAATATGGTCATTATGCTGATCGGCAATAAGAGTGATCTTGAT
TCACGCCGCGAGGTGAAGAAAGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTG
TTTATGGAAACGTCCGCCCGTACGGCGGCCAACGTCGAGGAAGCGTTCATCAACACGGCG
AAGGAGATCTACGAAAAGATTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGC
ATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCG
GGCGGACCGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATG
ATGTGCAATGCCGTGCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAG
TAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAA
AAACAGGGGCGGGCGGAGGTTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAA
CCTACTCCTTTTTCTGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGA
TCGCTACAGAACAGCTACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGAAGAGAT
ATGGTATAAACAAAGTTGGGGCTGCTTTTCCTTTCCCCTTCCCTCTATTACATTAGCTAT
TGCAAAAACAAAAACA

consensusID : consensus_9228#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 736
fasta sequence

                              [CAGAATCGCCACGAGGCCTGACCACCTGGCTGGAGGACGCCCGGCAACACTCGAACTCGAATATGGTCATTATGCTGATCGGCAATAAGAGTGATCTTGATTCACGCCGCGAGGTGAAGAAGGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGTCGAGGAAGCGTTCATCAACACGGCGAAGGAGATCTACGAAAAGATTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGAGTTTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCGGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGTACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGGAAAGAGATATGGAAATAAAACAAACGTTTAGGGGGCCTGCTTTTTCCNTTTCCCCCTTCCCTACTATTACATTAGCTATTTGCAAAAAACCAAAAAACCAAAAAACCAAACAGTAAAGTTAACCTTAAAACTAACTNACGTCACAACCGCGTNATCA]

[+] EMBL BX467623             [CAGAATCGCCACGAGGCCTGACCACCTGGCTGGAGGACGCCCGGCAACACTCGAACTCGAATATGGTCATTATGCTGATCGGCAATAAGAGTGATCTTGATTCACGCCGCGAGGTGAAGAAGGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGTCGAGGAAGCGTTCATCAACACGGCGAAGGAGATCTACGAAAAGATTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGAGTTTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCGGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGTACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGGAAAGAGATATGGAAATAAAACAAACGTTTAGGGGGCCTGCTTTTTCCNTTTCCCCCTTCCCTACTATTACATTAGCTATTTGCAAAAAACCAAAAAACCAAAAAACCAAACAGTAAAGTTAACCTTAAAACTAACTNACGTCACAACCGCGTNATCA]
[+] EMBL AGA282947            [                                                           AATATGGTCATTATGCTGATCGGC ATAAGAGTGATCTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_9228#1
CAGAATCGCCACGAGGCCTGACCACCTGGCTGGAGGACGCCCGGCAACACTCGAACTCGA
ATATGGTCATTATGCTGATCGGCAATAAGAGTGATCTTGATTCACGCCGCGAGGTGAAGA
AGGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCC
GTACGGCGGCCAACGTCGAGGAAGCGTTCATCAACACGGCGAAGGAGATCTACGAAAAGA
TTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGC
ACTCCCCGACGACGGTCCGCCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCT
AACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCG
GGCGGAGAGTTTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTC
GGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAG
TACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGGAAAGAGATATGGAAATAAAAC
AAACGTTTAGGGGGCCTGCTTTTTCCNTTTCCCCCTTCCCTACTATTACATTAGCTATTT
GCAAAAAACCAAAAAACCAAAAAACCAAACAGTAAAGTTAACCTTAAAACTAACTNACGT
CACAACCGCGTNATCA

consensusID : consensus_9228#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 709
fasta sequence

                              [CCGCCCACGCGTCCGCCGAGTGTGTTTTTGCTGGCCCAGACCCCGAAAACCTTTAACAAAGAGATAAACACGGCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCC-TTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTC-ACCCAGTGT--T----G----TCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTATAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTGCTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGC-AAGCAGATCAAGCTACAGATCTGGGACACGGCCGGCCAGGAAGCGTTCCGGTCGATCACCC]

[+] EMBL BM582702             [CCGCCCACGCGTCCGCCGAGTGTGTTTTTGCTGGCCCAGACCCCGAAAACCTTTAACAAAGAGATAAACACGGCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCC TTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTC ACCCAGTGT  T    G    TCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTATAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTGCTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGC AAGCAGATCAAGCTACAGATCTGGGACACGGCCG                           ]
[+] EMBL BM643016             [                    ccgGTTTTTGCTAGCCCAGACCCCGAAAACCTTTAACAAAGAGATAAACACGGCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCC TTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTC ACCCAGTGT  T    G    TCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTACAAGA  GTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTGCTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCGCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGCAAAGCAGATCAAGCTACAGATCTGGGACACGGCCGGCCAGGAAGCGTTCCGGTCGATCACCC]
[+] EMBL AL933617             [                                      ccagggntAAAACTTT AC AAGAGAT AACAC GTCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCCTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTTGACTTCGCCCCAGTGTCGTCGCCGCTATTCTGTACGATATTTTGCATCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCT CACTCCACTACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACG                                                                                                        ]
[+] EMBL BM585412             [                                               ccgCTTTAACAAAGAGATAAACACGGCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCC TTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGGTTTGCCTTC ACCCAGTGT  T    G    TCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTATAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTGCTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGC AAGCAGATCAAGCTACAGATC                                        ]




>consensus_9228#2
CCGCCCACGCGTCCGCCGAGTGTGTTTTTGCTGGCCCAGACCCCGAAAACCTTTAACAAA
GAGATAAACACGGCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCCTTTCT
CTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTCACCCAGTGTTGTCTGTACGA
TATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAG
TGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTATAAGAGTGTGT
GTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAG
ATTTCGTGAAATCCACGTAATTGCTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAG
CAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATC
TTCTACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGT
GTGGGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGAT
TTGACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGCAAGCAGATCAAG
CTACAGATCTGGGACACGGCCGGCCAGGAAGCGTTCCGGTCGATCACCC

consensusID : consensus_9228#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [ATCGCCCGAGGTTTATCTTGATTCACGCCGCGAAGCTAAGAAGGAGCGAACGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGCTCGAGGCACAACCGNCCCCTGGGCGCCTTTTTCCCCAAACCTCTAGACCATCCGTGGCGGCCTACCACGCCGGGCAAAAACGCGCGCGCAAANCTTTCCCCCCCTNTTTTTAAACCGGCAACAAACCAACCANCGGCCAACCTTTTCCAACGGTGCAACCGACGGGGGCCTTGGCTCTTGGCCTTTCTCATTGGGTCAAACNCCTTAAACGTTTCCCAACACAACCTTAACAAACCCTTGGCAAACTGGCACTCGTGGGGGCCCCCCCCTTTTTTATAACCACACCCCCACGGGTGGGGCCCCCCGCAAAACACTTTNCCACGAAATGCGAAAAACACTGCGANNAAAAAGCAACTTTTCTGACTTGGGGCGGGGGACCCGGCCCCCCAAAAGAGGGACGAGCCCACGACAAAGGAGCCACACGCAAAGCCGATTTTCCCGCCCGCTCCCCGCCCCGGGAAGNAACAGCCCCGAGANAAAAGGGCGCCCCCCACCCCCTAAGCAACGTTTATCCACCTGGCGGCACGCCCACCATANTTTGGGTCACGGTCGGCGTTGGNCACGAGCCCCCCAAATACA]

[+] EMBL AL933452             [ATCGCCCGAGGTTTATCTTGATTCACGCCGCGAAGCTAAGAAGGAGCGAACGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGCTCGAGGCACAACCGNCCCCTGGGCGCCTTTTTCCCCAAACCTCTAGACCATCCGTGGCGGCCTACCACGCCGGGCAAAAACGCGCGCGCAAANCTTTCCCCCCCTNTTTTTAAACCGGCAACAAACCAACCANCGGCCAACCTTTTCCAACGGTGCAACCGACGGGGGCCTTGGCTCTTGGCCTTTCTCATTGGGTCAAACNCCTTAAACGTTTCCCAACACAACCTTAACAAACCCTTGGCAAACTGGCACTCGTGGGGGCCCCCCCCTTTTTTATAACCACACCCCCACGGGTGGGGCCCCCCGCAAAACACTTTNCCACGAAATGCGAAAAACACTGCGANNAAAAAGCAACTTTTCTGACTTGGGGCGGGGGACCCGGCCCCCCAAAAGAGGGACGAGCCCACGACAAAGGAGCCACACGCAAAGCCGATTTTCCCGCCCGCTCCCCGCCCCGGGAAGNAACAGCCCCGAGANAAAAGGGCGCCCCCCACCCCCTAAGCAACGTTTATCCACCTGGCGGCACGCCCACCATANTTTGGGTCACGGTCGGCGTTGGNCACGAGCCCCCCAAATACA]




>consensus_9228#3
ATCGCCCGAGGTTTATCTTGATTCACGCCGCGAAGCTAAGAAGGAGCGAACGGCGAAGCG
TTCGCGCGCGAGCACGGGCTGGTGTTTATGGAAACGTCCGCCCGTACGGCGGCCAACGCT
CGAGGCACAACCGNCCCCTGGGCGCCTTTTTCCCCAAACCTCTAGACCATCCGTGGCGGC
CTACCACGCCGGGCAAAAACGCGCGCGCAAANCTTTCCCCCCCTNTTTTTAAACCGGCAA
CAAACCAACCANCGGCCAACCTTTTCCAACGGTGCAACCGACGGGGGCCTTGGCTCTTGG
CCTTTCTCATTGGGTCAAACNCCTTAAACGTTTCCCAACACAACCTTAACAAACCCTTGG
CAAACTGGCACTCGTGGGGGCCCCCCCCTTTTTTATAACCACACCCCCACGGGTGGGGCC
CCCCGCAAAACACTTTNCCACGAAATGCGAAAAACACTGCGANNAAAAAGCAACTTTTCT
GACTTGGGGCGGGGGACCCGGCCCCCCAAAAGAGGGACGAGCCCACGACAAAGGAGCCAC
ACGCAAAGCCGATTTTCCCGCCCGCTCCCCGCCCCGGGAAGNAACAGCCCCGAGANAAAA
GGGCGCCCCCCACCCCCTAAGCAACGTTTATCCACCTGGCGGCACGCCCACCATANTTTG
GGTCACGGTCGGCGTTGGNCACGAGCCCCCCAAATACA

consensusID : consensus_9228#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 494
fasta sequence

                              [GAATTGCCCGAGGTTTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCGGGCGGACCTGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATGATGTGCAATGCCGTGCCCGACGACGGTCCGCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCGGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGTACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGAAGAGATATGGAATAAACAAAGTTGGGGCTGCTTTTCCTTT]

[+] EMBL AL695606             [GAATTGCCCGAGGTTTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCGGGCGGACCTGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATGATGTGCAATGCCGTGCCCGACGACGGTCCGCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCGGCCAGACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGTACACAACCGAAGGCGATCAACGGGGGAGAGAAACAGGAAGAGATATGGAATAAACAAAGTTGGGGCTGCTTTTCCTTT]




>consensus_9228#4
GAATTGCCCGAGGTTTTGATATCAATAATGAGGCTAACGGCATCAAGATTGGCCAGCAGC
ACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCCGGGCGGACCTGGCCAGCAGT
GGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCATGATGTGCAATGCCGTGCCC
GACGACGGTCCGCGCTGGGCCGAAGCTGGGATGAAATTAAGTAAATTGGTCTAACAACTG
GGATTGGAACAAAATGGCAAGCGAGCGAGCGAGCGAGCGAAAAACAGGGGCGGGCGGAGG
TTTGCGTGCACTCTGTAGCGTTTCACCCTTCTTCGGTCGAACCTACTCCTTTTTCGGCCA
GACTGTGCTGAATCAGCGAATGCGGGTCACCGAAGGGGTGATCGCTACAGAACAGTACAC
AACCGAAGGCGATCAACGGGGGAGAGAAACAGGAAGAGATATGGAATAAACAAAGTTGGG
GCTGCTTTTCCTTT

consensusID : consensus_9228#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence

                              [CCGCACTTTTTCTCGTCCGAGTGTGTTTTTGCTGGCCCAGACCCCGAAAACCTTTAACAAAGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCCTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTTGACTTCGCCCCAGTGTCGTCGCCGCTAGTCTGTACGATATTTTGCATCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCACTCCACTACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCAC]

[+] EMBL BM601484             [CCGCACTTTTTCTCGTCCGAGTGTGTTTTTGCTGGCCCAGACCCCGAAAACCTTTAACAAAGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCCTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTTGACTTCGCCCCAGTGTCGTCGCCGCTAGTCTGTACGATATTTTGCATCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCACTCCACTACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCAC]




>consensus_9228#5
CCGCACTTTTTCTCGTCCGAGTGTGTTTTTGCTGGCCCAGACCCCGAAAACCTTTAACAA
AGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTTCCCCCTTTT
TTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTTGACTTCGCCCCAGTGTCGTCGCCG
CTAGTCTGTACGATATTTTGCATCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACG
GCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCACTCCACT
ACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGT
GTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCGTACACAGC
GAGCCCTACCAGCAGCAGCAGCAGCACCAC

consensusID : consensus_9228#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence

                              [GCAAGAATCGCAGAGGTTGANCGTATTGCAGGCAAAGTGTCGAGAATTGATTATTTCCCCCTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTTGACTTCGCCCCAGTGTCGTCGCCGCTAGTCTGTACGATATTTTGCATCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCACTCCATACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTA]

[+] EMBL AL696614             [GCAAGAATCGCAGAGGTTGANCGTATTGCAGGCAAAGTGTCGAGAATTGATTATTTCCCCCTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTTGACTTCGCCCCAGTGTCGTCGCCGCTAGTCTGTACGATATTTTGCATCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCACTCCATACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCGTACACAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTA]




>consensus_9228#6
GCAAGAATCGCAGAGGTTGANCGTATTGCAGGCAAAGTGTCGAGAATTGATTATTTCCCC
CTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTTGACTTCGCCCCAGTGTCGT
CGCCGCTAGTCTGTACGATATTTTGCATCCGAGTGTGTTATGCGTGTGTTTTCCACAGTG
CCACGGCCAAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCACT
CCATACAAGAGTGTGTGTGTGTGTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGG
TCGTGTGTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCGTACA
CAGCGAGCCCTACCAGCAGCAGCAGCAGCACCACCATCATCATCATCCTACATCTCCCAC
ACGTCCGCGACCAATCTTCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      CTTTAACAAAGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGAGAATTGATTATTT 60
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      CCCCCTTTCTCTCTCTCGATTGAATTACCTTCCCTCGTAGTTTTGCCTTCACCCAGTGTT 120
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      GTCTGTACGATATTTTGCTTCCGAGTGTGTTATGCGTGTGTTTTCCACAGTGCCACGGCC 180
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      AAGTACGCAGTGAAACGCTCTAGTCACAACACGGGAGTGATCTGTGCTCCACTCCACTAC 240
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      AAGAGTGTGTGTGTGTTTGGTGTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGT 300
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      GTGATAACAGATTTCGTGAAATCCACGTAATTACTTGCTAAAGTACAGCACCACCATCAT 360
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      CATCATCCTACATCTCCCACACGTCCGCGACCAATCTTCTACGCCAAAATGTCGTACGCT 420
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      TACTTGTTCAAATACATCATCATAGGAGACACAGGTGTGGGCAAGTCCTGCCTGCTGCTG 480
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      CAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTGACGATCGGCGTCGAGTTCGGT 540
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      GCGCGCATGATCACCATCGACGGCAAGCAGATCAAGCTACAGATCTGGGACACGGCCGGC 600
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      CAGGAAGCGTTCCGGTCGATCACCCGCTCGTACTACCGCGGCGCGGCCGGGGCCCTGCTC 660
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      GTGTACGACATTACGCGCCGCGAAACGTTCAACCACCTGACCACCTGGCTGGAGGACGCC 720
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      -------------------------------------------------------CAGAA 5
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      CGGCAACACTCGAACTCGAATATGGTCATTATGCTGATCGGCAATAAGAGTGATCTTGAT 780
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      TCGCCACGAGGCCTGACCACCTGGCTGGAGGACGCCCGGCAACACTCGAACTCGAATATG 65
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      TCACGCCGCGAGGTGAAGAAAGAGGAAGGCGAAGCGTTCGCGCGCGAGCACGGGCTGGTG 840
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      ------------------------------------------------------------
                                                                                  

consensus_9228#1      GTCATTATGCTGATCGGCAATAAG------AGTGATCTTGATTCACGCCGCGAGGTGAAG 119
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      TTTATGGAAACGTCCGCCCGTACGGCGGCCAACGTCGAGGAAGCGTTCATCAACACGGCG 900
consensus_9228#2      ------------------------------------------------------------
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      --------------------ATCGCCCGAGGTTTATCTTGATTCACGCCGCGAAGCTAAG 40
                                                                                  

consensus_9228#1      AAGGAGGAAGGCGAAGCGTTC---GCGCGCGAGCACG-G-GCTGGTGTTTATGGAAACGT 174
consensus_9228#4      ----------------GAATT---GCCCGAGGTTTTG-ATATCAATAATGAGGCTAACGG 40
consensus_9228#0      AAGGAGATCTACGAAAAGATTCAGGAGGGTGTATTTG-ATATCAATAATGAGGCTAACGG 959
consensus_9228#2      ----------------------CCGCCCACGCGTCCG-CCGAGTGTGTTTTTGCTGGCCC 37
consensus_9228#5      ----------------------CCGCACTTTTTCTCGTCCGAGTGTGTTTTTGCTGGCCC 38
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      AAGGAGCGAACGGCGAAGCGT-TCGCGCGCGAGCACG--GGCTGGTGTTTATGGAAACGT 97
                                                                                  

consensus_9228#1      CCGCCCGTACGGCGGCCAACG-TCGAGGAAGCGTTCATCAACACGGCGAAGGAGATCTAC 233
consensus_9228#4      CATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCC 100
consensus_9228#0      CATCAAGATTGGCCAGCAGCACTCCCCGACGAGCCCATCGCTGGGCAGCGGCAACAGCCC 1019
consensus_9228#2      AGACCCCGAAAACCTTTAACAAAGAGATAAACACGGCCGTATTGCAGGCAAAAGTGTCGA 97
consensus_9228#5      AGACCCCGAAAACCTTTAACAAAGAGATAAACACGTCCGTATTGCAGGCAAAAGTGTCGA 98
consensus_9228#6      ---------------GCAAGAATCGCAGAGGT-TGANCGTATTGCAGGCAAA-GTGTCGA 43
consensus_9228#3      CCGCCCGTACGGCGGCCAACGCTC---GAGGCACAACCGNCCCCTGGGCGCCTTTTTCCC 154
                                       *          *                  *            

consensus_9228#1      GAAAAGATTCAGGAGGGTGTATTTGATATCAATAATGAGGCTAACGGC-ATCAA-GAT-- 289
consensus_9228#4      GGGCGGACCTGGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCA 160
consensus_9228#0      GGGCGGACC-GGCCAGCAGTGGTTGCTGCTAAGCGTCGTGCCGCCAGCCACCGACGATCA 1078
consensus_9228#2      GAATTGATT--ATTTCCCCCTTTCT-CTCTCTCGATTGAATTACCTTCCCTCGTAGTTTT 154
consensus_9228#5      GAATTGATT--ATTTCCCCCTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTT 156
consensus_9228#6      GAATTGATT--ATTTCCCCCTTTTTTCTCTCTCGATTGAATTGCCTTCCCTCGTAGTTTT 101
consensus_9228#3      CAAACCTCTAGACCATCCGTGGCGGCCTACCACGCCGGGCAAAAACGCGCGCGCAAANCT 214
                                                                     *   *        

consensus_9228#1      TGGCCAGCAGCAC--TCC-CCGACGACGGTCCGCCGCTGGGCCGAAGCT--GGGATGAAA 344
consensus_9228#4      TGATGTGCAATGCCGTGC-CCGACGACGGTCCGC-GCTGGGCCGAAGCT--GGGATGAAA 216
consensus_9228#0      TGATGTGCAATGCCGTGC-CCGACGACGGTCCGCCGCTGGGCCGAAGCT--GGGATGAAA 1135
consensus_9228#2      GCCTTCACCC-AGTGTTG-TC----------TGT-ACGATATTTTGCTT--CCGAGTGTG 199
consensus_9228#5      GACTTCGCCCCAGTGTCG-TCGCCGCTAGTCTGT-ACGATATTTTGCAT--CCGAGTGTG 212
consensus_9228#6      GACTTCGCCCCAGTGTCG-TCGCCGCTAGTCTGT-ACGATATTTTGCAT--CCGAGTGTG 157
consensus_9228#3      TTCCCCCCCTNTTTTTAAACCGGCAACAAACCAACCANCGGCCAACCTTTTCCAACGGTG 274
                             *       *    *                           *     *     

consensus_9228#1      TTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGC-GAGCGAGCG 403
consensus_9228#4      TTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGC-GAGCGAGCG 275
consensus_9228#0      TTAAGTAAATTGGTCTAACAACTGGGATTGGAACAAAATGGCAAGCGAGC-GAGCGAGCG 1194
consensus_9228#2      TTATGCG---TGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAAC-GCTCTAGT- 254
consensus_9228#5      TTATGCG---TGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAAC-GCTCTAGT- 267
consensus_9228#6      TTATGCG---TGTGTTTTCCACAGTGCCACGGCCAAGTACGCAGTGAAAC-GCTCTAGT- 212
consensus_9228#3      CAACCGACGGGGGCCTTGGCTCTTGGCCTTTCTCATTGGGTCAAACNCCTTAAACGTTTC 334
                        *        *   *     *   *       **      **           *     

consensus_9228#1      AGCGAAAAACAGGGGCGGGCGGAGAGTT---TGCACT-CTGTAGCGTTT-CACCCTTCTT 458
consensus_9228#4      AGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACT-CTGTAGCGTTT-CACCCTTCTT 333
consensus_9228#0      AGCGAAAAACAGGGGCGGGCGGAGGTTTGCGTGCACT-CTGTAGCGTTT-CACCCTTCTT 1252
consensus_9228#2      --CACAACACGGGAGTGATCTGTGCTCC-ACTCCACTATAAGAGTGTGTGTGTGTGTGGT 311
consensus_9228#5      --CACAACACGGGAGTGATCTGTGCTC--ACTCCACTACAAGAGTGTGTGTGTGTGTGGT 323
consensus_9228#6      --CACAACACGGGAGTGATCTGTGCTC--ACTCCA-TACAAGAGTGTGTGTGTGTGTGGT 267
consensus_9228#3      CCAACACAACCTTAACAAACCCTTGGCAAACTGGCACTCGTGGGGGCCCCCCCCTTTTTT 394
                           *  **         *           *           * *          *  *

consensus_9228#1      CGGTCGAACCTACTCC----TTTTTCGGCCAGACTGTGCTGAATCAGCGAATGCGGGTCA 514
consensus_9228#4      CGGTCGAACCTACTCC----TTTTTCGGCCAGACTGTGCTGAATCAGCGAATGCGGGTCA 389
consensus_9228#0      CGGTCGAACCTACTCC----TTTTTCTGCCAGACTGTGCTGAATCAGCGAATGCGGGTCA 1308
consensus_9228#2      GTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAA 371
consensus_9228#5      GTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAA 383
consensus_9228#6      GTGAAGAAGCAACATAAAAGCGAACGGGGAAGGTCGTGTGTGATAACAGATTTCGTGAAA 327
consensus_9228#3      ATAACCACACCCCCACGGGTGGGGCCCCCCGCAAAACACTTTNCCACGAAATGCGAAAAA 454
                            *  *  *                                *   * * **    *

consensus_9228#1      C----CGAAGGGGTGA---TCGCTACAGAACAG--TACACAACCGAAGGCGATCAACGGG 565
consensus_9228#4      C----CGAAGGGGTGA---TCGCTACAGAACAG--TACACAACCGAAGGCGATCAACGGG 440
consensus_9228#0      C----CGAAGGGGTGA---TCGCTACAGAACAGC-TACACAACCGAAGGCGATCAACGGG 1360
consensus_9228#2      T----CCACGTAATTGC--TTGCTAAAGTACAGCGTACACAGC-GAGCCCTACCAGCAGC 424
consensus_9228#5      T----CCACGTAATTAC--TTGCTAAAGTACAGCGTACACAGC-GAGCCCTACCAGCAGC 436
consensus_9228#6      T----CCACGTAATTAC--TTGCTAAAGTACAGCGTACACAGC-GAGCCCTACCAGCAGC 380
consensus_9228#3      CACTGCGANNAAAAAGCAACTTTTCTGACTTGGGGCGGGGGACCCGGCCCCCCAAAAGAG 514
                           * *               *        *         *      *    *     

consensus_9228#1      GGAGAGAAACAGGGAAAGAGATATGGAAATAAAACAAACGTTTAGGGGGCCTGCTTTTTC 625
consensus_9228#4      GGAGAGAAACAGG--AAGAGATATGGAA--TAAACAAA-GTT----GGGGCTGCTTTTCC 491
consensus_9228#0      GGAGAGAAACAGG--AAGAGATATGGTA--TAAACAAA-GTT----GGGGCTGCTTTTCC 1411
consensus_9228#2      AGC-AGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTC 483
consensus_9228#5      AGC-AGCAGCACCAC--------------------------------------------- 450
consensus_9228#6      AGC-AGCAGCACCACCATCATCATCATCCTACATCTCCCACACGTCCGCGACCAATCTTC 439
consensus_9228#3      GGACGAGCCCACGACAAAGGAGCCACACGCAAAGCCGATTTTCCCGCCCGCTCCCCGCCC 574
                       *       **                                                 

consensus_9228#1      CNTTTCCCCCTTCCCTACTATTACATTAGCTATTTGCAAAAAACCAAAAAACCAAAAAAC 685
consensus_9228#4      TTT--------------------------------------------------------- 494
consensus_9228#0      TTT----CCCCTTCCCTCTATTACATTAGCTATTGCAAAAACAAAAACA----------- 1456
consensus_9228#2      TACGCCAAAATGTCGTACGCTTACTTGTTCAAATACATCATCATAGGAGACACAGGTGTG 543
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      TA---------------------------------------------------------- 441
consensus_9228#3      CGGGAAGNAACAGCCCCGAGANAAAAGGGCGCCCCCCACCCCCTAAGCAACGTTTATCCA 634
                                                                                  

consensus_9228#1      CAAACAGTAAAGTTAACCTTAAAACTAACTNACGTCACAACCGCGTNATCA--------- 736
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      ------------------------------------------------------------
consensus_9228#2      GGCAAGTCCTGCCTGCTGCTGCAGTTTACCGACAAACGCTTCCAGCCGGTGCACGATTTG 603
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      CCTGGCGGCACGCCCACCATANTTTGGGTCACGGTCGGCGTTGGNCACGAGCCCCCCAAA 694
                                                                                  

consensus_9228#1      ------------------------------------------------------------
consensus_9228#4      ------------------------------------------------------------
consensus_9228#0      ------------------------------------------------------------
consensus_9228#2      ACGATCGGCGTCGAGTTCGGTGCGCGCATGATCACCATCGACGGCAAGCAGATCAAGCTA 663
consensus_9228#5      ------------------------------------------------------------
consensus_9228#6      ------------------------------------------------------------
consensus_9228#3      TACA-------------------------------------------------------- 698
                                                                                  

consensus_9228#1      ----------------------------------------------
consensus_9228#4      ----------------------------------------------
consensus_9228#0      ----------------------------------------------
consensus_9228#2      CAGATCTGGGACACGGCCGGCCAGGAAGCGTTCCGGTCGATCACCC 709
consensus_9228#5      ----------------------------------------------
consensus_9228#6      ----------------------------------------------
consensus_9228#3      ----------------------------------------------