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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9236#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1775 fasta sequence
[CTGGATGGCGTAAATTGCGCAACATCGTACAGTGGACACCGTTCTTCCAGACGTACAAAAAGCAACGCTATCCGTGGGTGCAGCTAGCCGGGCATCAGGGAAACTTCAAAGCCGGACCGGACCAGGGCACGGTACTGAAGAAGCTATGCCCCAAAGAGGAAAAGTGTTTTAAGGTACTGATGAAGGATGTCCTGAGACCCTACGTTCCCGAGTACAAGGGTCAGGTGAATAGTGAAGATGGCGAATCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGTGATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCCCACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCA-CTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATTAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACACTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGCAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCACGGCGGACACGAGCACAGGCCTACGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTACGCTGCCAACCAAGGACTGAATCGAATTAGTATGTAAGATTTTTGTTTGTGGTCAACCACGAAAACACATGCAGTTGTCGAATGATTGAGAACCGTTTGTTCATACTCCGGCATCGAGCGAGTGAGAATCCTTTGTTAATTTATAAAATACTACGATCAAACACTCTGAACATTAGGATAGCAATGGTAGCGTAAAGTACAGTAGACGAACATACAG-TTAATATATTCAACTCTATTACGAAAATCGTTTAGTTTTGTATGTGTATGTAATCGGAATTGTAGGTTTTTGTGTAGTGATAACTTCACATTTTTGGTAAGTAGCTAATAAGTACGTACGAAAAAATATAGTAATTGTTAATATTTTGGTAAACTTTTTTGAAGTCAGTCATGTCGGCCTACTCAGTCATACCGGCCTACTTAGTCATGCCGGTTCTATATAGGCTTGCTGTACTTATGTGAGTAATACACCAACGGATAGTCTTTGTTATGGGAGGTCAGTCCGAATGAGGATCGATCAGGTTTGCGATCTTCATTGTTTCTGCCCTACAATGTGGTTCAT]
[+] EMBL BX622272 [CTGGATGGCGTAAATTGCGCAACATCGTACAGTGGACACCGTTCTTCCAGACGTACAAAAAGCAACGCTATCCGTGGGTGCAGCTAGCCGGGCATCAGGGAAACTTCAAAGCCGGACCGGACCAGGGCACGGTACTGAAGAAGCTATGCCCCAAAGAGGAAAAGTGTTTTAAGGTACTGATGAAGGATGTCCTGAGACCCTACGTTCCCGAGTACAAGGGTCAAGTGAATAGTGAAGATGGCGAATCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGTGATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATTGATCAAAACGCCCCCACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTC AAAGCCACGANGTGATAGGAAGCTCA CTGTTGNTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGGCATTACGCATGACAG ]
[+] EMBL BX604157 [ CAACATCTTACAGTGGACCCCGTTCTTCCAGACGTACAAAAAGCAACGCTATCCGTGGGTGCAGCTAGCCGGGCATCAGGGAAACTTCAAAGCCGGACCGGACCAGGGAACCGTACTGAAGAAGCTATGCCCCAAAGAGGAAAAGTGTTTTAAGGTACTGATGAAGGATGTCCTGAGACCCTACGTTCCCGAGTACAAGGGTCAGGTGAATAGTGAAGATGGCGAATCAACCTA ]
[+] EMBL CNS09LFC [ cGTCAGGTGAATAGTGAAGATGGCGAATCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGTGATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCCCACCGAAGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGTATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCA CTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATTAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACACTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGTCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGCAAACCAGAGGATCGGCAGCTGGTGGGCAACAGCACGGCGGACACGAGCACAGGCCTACGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTAC CTAAAAAACAAGGACTGAAT ]
[+] EMBL CNS09FT2 [ TGGCGAATCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGTGATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCCCACCGAAGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGTATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCA CTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATTAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACACTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGCA ]
[+] EMBL BM599511 [ ccgGATTTCTATCAACCGTGCGTGATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCCCACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACCTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATCAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCG ]
[+] EMBL AL932385 [ cgccgaGGAAA CATCTCCAGCACGT CACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCA CTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACC ]
[-] EMBL CNS09LFD [ CGAATAGAGGGTATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCTTTTCGCGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTAA CTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATTAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAAAACTGCAGTGCCTGACGGAGCGAATACCCCGGTTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCCCCGTGTCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGCAAACCAGAGGATCGGCAGCTGGTGGGCAACAGCACGGCGGACACGAGAACAGGCCTACGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTACGCTGCCAACCAAGGACTGAATCGAATTAGTATGTAAGATTTTTGTTTGTGGTCAACCACGAAAACACATGCAGTTGTCGAATGATTGAGAACCGTTTGTTCATACTCCGGCATCGAGCGAGTGAGAATCCTTTGTTAATTTATAAAATACTACGATCAAACACTCTGAACATTAGGATAGCAATGGTAGCGTAAAGTACAGTAGACGAACATACAG TTCATATATTCAg ]
[+] EMBL BX625321 [ ATCTGTGAAGCATTTCGCGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCA CTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATCAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACACTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATTCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTGCCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGCAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCACGGCGGACACGAGCACAGGCCTGCGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTACGCTGCCAACCAAGGACTGAATCGAATTAGTATGTAAGATTTTTGTTTGTGGTCNACCACGAAAACACATGCAGTTGTCGAATGATTGANAACCGTTTGNTCATACTCCGGCATCGA ]
[+] EMBL BX617947 [ cTGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATCAATAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGTAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCACGGCGGACACGAGCACAGGCCTGCGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTACGCTGCCAACCAAGGACTGAATCGAATTAGTATGTAAGATTTTTGTTTGTGGTCAACCACGAAAACACATGCAGTTGTCGAATGATTGAGGACCGTTTGTTCATACTCCGGCATCGAGCGAGTGAGAATCCTTTGTTAATTTATAAAATACTTCGATCAAACACTCTGAACATTAGGATAGTAATGGTAGCGTAAAGTACAGTAGACGAACATACAGTTTAATATATTCAA ]
[+] EMBL BM610817 [ ccgCGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTGCCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGCAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCACGGCGGACACGAGCACAGGCCTGCGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTACGCTGCCAACCAAGGACTGAATCGAATTAGTATGTAAGATTTTTGTTTGTGGTCAACCACGAAAACACATGCAGTTGTCc ]
[+] EMBL BM653082 [ ccGCCCACGCGTCCG ATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTACGCTGCCAACCAAGGACTGAATCGAATTAGTATGTAAGATTTTTGTTTGTGGTCAACCACGAAAACACATGCAGTTGTCGAATGATTGAGGACCGTTTGTTCATACTCCGGCATCGAGCGAGTGAGAATCCTTTGTTAATTTATAAAATACTTCGATCAAACACTCTGAACATTAGGATAGTAATGGTAGCGTAAAGTACAGTAGACGAACATACAGTTTAATATATTCAACTCTATTACGAAAATCGTTTAGTTTTGTATGTGTATGTAATCGGAATTGTAGGTTTTTGTGTAGTGATAACTTCACATTTTTGGTAAGTAGCTAATAAGTACGTACGAAAAAATATAGTAATTGTTAATATTTTGGTAAACTTTTTTGAAGTCAGTCATGTCGGCCTACTCAGTCATACCGGCCTACTTAGTCATGCCGGTTCTATATAGGCTTGCTGTACTTATGTGAGTAATACACCAACGGATAGTCTTTGTTATGGGAGGTCAGTCCGAATGAGGATCGATCAGGTTTGCGATCTTCATTGTTTCTGCCCTACAATGTGGTTCAT]
[-] EMBL CNS09FT3 [ tCCAACCAATTACTGAATCGAATTAGTATGTAAGATTTTTGTTTGTGGTCAACCACGAAAACACATGCAGTTGTCGAATGATTGAGAACCGTTTGTTCATACTCCGGCATCGAGCGAGTGAGAATCCTTTGTTAATTTATAAAATACTACGATCAAACACTCTGAACATTAGGATAGCAATGGTAGCGTAAAGTACAGTAGACGAACAT ]
consensusID : consensus_9236#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1014 fasta sequence
[CGCTTGTGCCACAATATTCAAACATACATTTTGATAGATATATTGATACAGTTTTAAACATCATTAAAACTTGTTTAAGCTTTCTAAAGGTTGTCTTTGCTAGGCAATATTGCATATGTATCGTTTTCCTCCTCTCTAGTTTTGCAAACCATCAGCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGTGATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCCCACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACTGTTGTTCGTGCACGACCGTCACAAAGCAAGCGTCTGGCTGATCGACTTTGCCAGCGAAGTGCACGATCGGCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGTAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCACGGCGGACACGAGCACAGGCCTGCGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTA]
[+] EMBL BX604225 [CGCTTGTGCCACAATATTCAAACATACATTTTGATAGATATATTGATACAGTTTTAAACATCATTAAAACTTGTTTAAGCTTTCTAAAGGTTGTCTTTGCTAGGCAATATTGCATATGTATCGTTTTCCTCCTCTCTAGTTTTGCAAACCATCAGCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGTGATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCCCACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACTGTTGTTCGTGCACGACCGTCACAAAGCAAGCGTCTGGCTGATCGACTTTGCCA ]
[+] EMBL BX612725 [ AGAGGAACTGTCGAAAGCCAAAGAGAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCCCACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGAAACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGTAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCACGGCGGACACGAGCACAGGCCTGCGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCAGGTCTGGCCGGGCGGGTA]
consensusID : consensus_9236#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[CCGCGGACGCGTGGGCGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATCAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGTAAACCAGAGGATCAGCA]
[+] EMBL BM594610 [CCGCGGACGCGTGGGCGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGGTACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCGCGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGATTCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACTGTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGTCGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGAAGACGGCTACCTGATCGGAATCAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCGGCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAACGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGAGATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGTGAATAACAACAACAATTACGACTGTAAACCAGAGGATCAGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9236#0 CTGGATGGCGTAAATTGCGCAACATCGTACAGTGGACACCGTTCTTCCAGACGTACAAAA 60
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 AGCAACGCTATCCGTGGGTGCAGCTAGCCGGGCATCAGGGAAACTTCAAAGCCGGACCGG 120
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 --------------------------------CGCTTGTGCCACAATATTCAAACATACA 28
consensus_9236#0 ACCAGGGCACGGTACTGAAGAAGCTATGCCCCAAAGAGGAAAAGTGTTTTAAGGTACTGA 180
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 TTTTGATAGATATATTGATACAGTTTTAAAC-ATCATTAAAACTTGTTTAAGCTTTCTAA 87
consensus_9236#0 TGAAGGATGTCCTGAGACCCTACGTTCCCGAGTACAAGGGTCAGGTGAATAGTGAAGATG 240
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 AGGTTGTCTTTGCTAGGCAATATTGCATATGTATCGTTTTCCTCCTCTCTAGTTTTGCAA 147
consensus_9236#0 GCGA--ATCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGT 298
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ACCATCAGCAACCTATATACAGCTGCAGGATCTACTCAGCGATTTCTATCAACCGTGCGT 207
consensus_9236#0 GATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGA 358
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 GATGGATTGTAAGATAGGCGTCCGGACCTACCTAGAAGAGGAACTGTCGAAAGCCAAAGA 267
consensus_9236#0 GAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCC 418
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 GAAGCCGAAACTTCGAAAAGATATGTACGAAAAGATGATACAGATCGATCAAAACGCCCC 327
consensus_9236#0 CACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGA 478
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 CACCGAGGAGGAGCACCGTGCTAAAGGTGTCACCAAGCCACGCTACATGGTATGGAGGGA 387
consensus_9236#0 AACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGG 538
consensus_9236#2 -----CCGCGGACGCGTGGGCGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGG 55
consensus_9236#1 AACCATCTCCAGCACGTCCACGCTCGGATTTCGAATAGAGGGCATCAAAAAGAGTGACGG 447
* * * *** ****************************************
consensus_9236#0 TACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCG 598
consensus_9236#2 TACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCG 115
consensus_9236#1 TACGAGTTCAAAGGATTTCAAAACGACAAAATCGCGTGATCAAATCTGTGAAGCATTTCG 507
************************************************************
consensus_9236#0 CGAATTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGAT 658
consensus_9236#2 CGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGAT 175
consensus_9236#1 CGAGTTTACTGACGGGTTCCCGCATGCAATGCCTAAATACATTCAACGGTTGAAGGCGAT 567
*** ********************************************************
consensus_9236#0 TCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACT 718
consensus_9236#2 TCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACT 235
consensus_9236#1 TCGGGCAACGCTCGAGTATTCCGAGTTTTTCAAAAGCCACGAGGTGATAGGAAGCTCACT 627
************************************************************
consensus_9236#0 GTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGT 778
consensus_9236#2 GTTGTTCGTGCACGACCGTCACAAGGCAAGCGTCTGGCTGATCGACTTTGCCAAAACGGT 295
consensus_9236#1 GTTGTTCGTGCACGACCGTCACAAAGCAAGCGTCTGGCTGATCGACTTTGCCA------- 680
************************ ****************************
consensus_9236#0 CGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGA 838
consensus_9236#2 CGCGCTTCCGGAGAGTGTGGCCATTACGCATGACAGCAAGTGGAAGGTGGGCAACCACGA 355
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 AGACGGCTACCTGATCGGAATTAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCG 898
consensus_9236#2 AGACGGCTACCTGATCGGAATCAACAATCTGATCGACATCTTCAGCGAAGTGCACGATCG 415
consensus_9236#1 --------------------------------------------GCGAAGTGCACGATCG 696
****************
consensus_9236#0 GCAAACACTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAA 958
consensus_9236#2 GCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAA 475
consensus_9236#1 GCAAACAGTGCAGTGCCTGACGGAGCGAATACCCCGGCTTTCGCTACCGGACGACACCAA 756
******* ****************************************************
consensus_9236#0 CGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGA 1018
consensus_9236#2 CGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGA 535
consensus_9236#1 CGGTATCGATGCGAATCCGGATGATCCTCTGCGTCACGACGGGTGCAATCGGAACAGTGA 816
************************************************************
consensus_9236#0 GATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGT 1078
consensus_9236#2 GATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGT 595
consensus_9236#1 GATCTCGTCTGCTGCCGTACCCGCCGTGCCGGACCGATGTGTCGATAAGATCGGCTGTGT 876
************************************************************
consensus_9236#0 GAATAACAACAACAATTACGACTGCAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCAC 1138
consensus_9236#2 GAATAACAACAACAATTACGACTGTAAACCAGAGGATCAGCA------------------ 637
consensus_9236#1 GAATAACAACAACAATTACGACTGTAAACCAGAGGATCAGCAGCTGGTGGGCAACAGCAC 936
************************ *****************
consensus_9236#0 GGCGGACACGAGCACAGGCCTACGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCA 1198
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 GGCGGACACGAGCACAGGCCTGCGTGACTGTATCGGGTCGAGTTCGGGGTAGTGCCGGCA 996
consensus_9236#0 GGTCTGGCCGGGCGGGTACGCTGCCAACCAAGGACTGAATCGAATTAGTATGTAAGATTT 1258
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 GGTCTGGCCGGGCGGGTA------------------------------------------ 1014
consensus_9236#0 TTGTTTGTGGTCAACCACGAAAACACATGCAGTTGTCGAATGATTGAGAACCGTTTGTTC 1318
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 ATACTCCGGCATCGAGCGAGTGAGAATCCTTTGTTAATTTATAAAATACTACGATCAAAC 1378
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 ACTCTGAACATTAGGATAGCAATGGTAGCGTAAAGTACAGTAGACGAACATACAGTTAAT 1438
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 ATATTCAACTCTATTACGAAAATCGTTTAGTTTTGTATGTGTATGTAATCGGAATTGTAG 1498
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 GTTTTTGTGTAGTGATAACTTCACATTTTTGGTAAGTAGCTAATAAGTACGTACGAAAAA 1558
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 ATATAGTAATTGTTAATATTTTGGTAAACTTTTTTGAAGTCAGTCATGTCGGCCTACTCA 1618
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 GTCATACCGGCCTACTTAGTCATGCCGGTTCTATATAGGCTTGCTGTACTTATGTGAGTA 1678
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 ATACACCAACGGATAGTCTTTGTTATGGGAGGTCAGTCCGAATGAGGATCGATCAGGTTT 1738
consensus_9236#2 ------------------------------------------------------------
consensus_9236#1 ------------------------------------------------------------
consensus_9236#0 GCGATCTTCATTGTTTCTGCCCTACAATGTGGTTCAT 1775
consensus_9236#2 -------------------------------------
consensus_9236#1 -------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||