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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9251#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2211 fasta sequence
[CCGCGTCATTACCGAGCATTATCATCGTCGGCCAACACACTGTACTTTTACTACCAGTAGTTGTTTGCCAATTATAATTATAATTATTATTATTGTGACGTTCCGTTCCCTAGCGCCCTATTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGA-AAGGGC-TCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC-TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC-GGTATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA-GAAGAAGAAAAAA-ACAGAG-AATTGAAA-AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGACGAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTAGGACATTGCGACA-CCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAGTGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGATCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCC-AAAAAATTTCAAAAAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGCGAAACCCCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA-CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTCTGTCTAAGCTTTTTGTTAGTGTATAAGTTTTAATTGTATAACTCGTATCCATAATCTTATTATTACTATTACTATTATTATATTATTATTTAACTTTTGCCTAATTTGTATAAGTAT]
[+] EMBL BM632206 [CCGCGTCATTACCGAGCATTATCATCGTCGGCCAACACACTGTACTTTTACTACCAGTAGTTGTTTGCCAATTATAATTATAATTATTATTATTGTGACGTTCCGTTCCCTAGCGCCCTATTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGACAAGGGC TCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCACGGGTATTAGGGTGTAGCTTTGCA ]
[+] EMBL BM635722 [ ccgGCCCTATTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGACAAGGGC TCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGTATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA GAAGAAGAAAAAA ACAGAG AATTGAAA AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGACGAAAGAA ]
[+] EMBL AL932653 [ ccgagcTTTAGAGA CAGG CTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGCAACGTAAATGTTGCATTTTCTTATTTGATTTGTTTGGTACTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTC TGGGTTTTTTTGTAATTTGCTCCCCC TTTTCTGTACGATAAGAAAAAAACCCCGCAAATTGATGCTTTAGTTGTTTTAAGTCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTATAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTTTCCCCTTTTTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGTATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAACNAAGAAGAAAAAANACAGAGCAATTGAAACAGCTTTCGAACAGTGCAGTACCAGTGCAAGGACAGTGGAAAGTAC ]
[+] EMBL BM617450 [ ccggAGAGA GAGCCCTTGTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGTATTAGG ]
[+] EMBL BX626633 [ TCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGNATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA GAAGAAGAAAAAA ACAGAG AATTGAAA AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGNCGACGAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTANGACATTGCGACACCCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTT ]
[+] EMBL BM612881 [ cgtccgGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA GAAGAAGAAAAAA ACAGAG AATTGAAA AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGACGAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTAGGACATTGCGACA CCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAGTGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGATCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCC AAAAAATTTCAAAAAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGCGAAACCCCCAAAAC ]
[+] EMBL BM578362 [ ccgGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTAGGACATTGCGACA CCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAGTGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGATCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCC AAAAAATTTCAAAAAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGCGAAACCCCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATA ]
[+] EMBL BX626096 [ AACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCCAAAAAAAATTC AAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGC AAACACCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTTTTTGGAAGAAAGTGATAGGATTGC AAAAAAACAGCTGATCGTACTGTGTAATAAGCGAGAGACAAATGGAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTC ]
[+] EMBL BX623870 [ GCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGNAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGANGATGGATG ]
[+] EMBL BX623158 [ TTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAG ]
[+] EMBL BX615742 [ TCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCT ]
[+] EMBL BX609974 [ AGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTCTGTCTAAGCTTTTTGTTAGTGTATAAGTTTTAATTGTATAACTCGTATCCATAATCTTATTATTACTATTACTATTATTATATTATTATTTAACTTTTGCCTAATTTGTATAAGTAT]
[+] EMBL BX615982 [ ACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATTTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTCTGTCTAAGCTTTTTGTTAGTGTATAAGT ]
consensusID : consensus_9251#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 699 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTC]
[+] EMBL BM608313 [CCGCGGACGCGTGGGCGGACGCGTGGGGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTC]
consensusID : consensus_9251#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence
[AGCAGAATCGCCCGAGGTTAAGGTGCATCTTTTAGAGACAAGGGCTCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTATAATTTATTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTAANGTGTACAGTTTTCTCCCCTTCTTTATGTAAGCAATTTTAACATTTACTCGCCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTCATGGCAGAGAGAACGGAATTCTGAACGGGAACAGCAGCACAGTACAATACGTAGCACGGTATNAGGTTGTAGCTTTGC]
[+] EMBL AL696600 [AGCAGAATCGCCCGAGGTTAAGGTGCATCTTTTAGAGACAAGGGCTCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTATAATTTATTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTAANGTGTACAGTTTTCTCCCCTTCTTTATGTAAGCAATTTTAACATTTACTCGCCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTCATGGCAGAGAGAACGGAATTCTGAACGGGAACAGCAGCACAGTACAATACGTAGCACGGTATNAGGTTGTAGCTTTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9251#0 CCGCGTCATTACCGAGCATTATCATCGTCGGCCAACACACTGTACTTTTACTACCAGTAG 60
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TTGTTTGCCAATTATAATTATAATTATTATTATTGTGACGTTCCGTTCCCTAGCGCCCTA 120
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGAAAGGGCTC 180
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTT 240
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 CTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCAT 300
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 ATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAA 360
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 GAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCC 420
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 AACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTC 480
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 AGTTCGAATTTTTTGTGTACAGTTTTCTCCCCTTCTTTTGTAAGCAATTTTAACATTTAC 540
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAAT 600
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TCTGAAGGGAACAGCAGCACAGTACAATACGTAGCACGGTATTAGGTTGTAGCTTTGCAG 660
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 CGTTGCTATTGCAATGATTGTTTAGAAGAAGAAGAAAAAAACAGAGAATTGAAAAGCTTC 720
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 CGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGAC 780
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 GAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGT 840
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 AATTAGTGGTTAGGACATTGCGACACCCTTACTCGATTCGATAAACGAGCAGCACGAGCT 900
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 AACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAG 960
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGA 1020
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAA 1080
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 AATCAAACGTGTGGTGCAAACGCGTTCAACTCCAAAAAATTTCAAAAAAAAAAAAGTGTG 1140
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 ATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGT 1200
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 CGCAGACGATCGTCGGCGAAACCCCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCA 1260
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 CCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCG 1320
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGT 1380
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 GGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGA 1440
consensus_9251#1 ------------CCGCGGAC-GCGTGGGCGGACG-CGTGGGGGAATACATTTGGTTTCGA 46
consensus_9251#2 -------------------------------------AGCAGAATCGCCCGAGGTTAAGG 23
* * * **** *
consensus_9251#0 TACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGG 1500
consensus_9251#1 TACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGG 106
consensus_9251#2 TGCATCTTTTAGA-----GACAAGGGCTCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGG 78
* * ** * *** ** * * * * ** ** **
consensus_9251#0 ATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGC 1560
consensus_9251#1 ATTGCAAAAAAAA-CAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGC 165
consensus_9251#2 AATGTAGAGAAACGTAAATG-TTGCGTTTTCTTATTTG--------ATTTGTTTGGTTCT 129
* ** * * *** * ** * * * * ** * * ** **
consensus_9251#0 TTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAG 1620
consensus_9251#1 TTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAG 225
consensus_9251#2 TGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTA 189
* * ** * * * * ** * ** * * * **** * * *
consensus_9251#0 CAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAA-AAAAAAAACACTCAC 1679
consensus_9251#1 CAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAA-AAAAAAAACACTCAC 284
consensus_9251#2 TAA----TTTATTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAA 245
** ***** ** * **** * * ** ********* * **
consensus_9251#0 GTTCATCATTTATCTGTATTTGTAAAACCATGTCA-CCTGCGTAAATAGCGATCCCGATC 1738
consensus_9251#1 GTTCATCATTTATCTGTATTTGTAAAACCATGTCA-CCTGCGTAAATAGCGATCCCGATC 343
consensus_9251#2 ATTGATGCTTTA---GTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACAC 302
** ** **** ** *** *** ** * ** **** * * ** * *
consensus_9251#0 AAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATT 1798
consensus_9251#1 AAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATT 403
consensus_9251#2 GAGCGCGTCTAATTTCGATCGATTT----ATTAGTGTTCGAGTTCCAATTCAGTTCGA-- 356
* * * * * ** * * * * ** * * * *****
consensus_9251#0 GATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGG-CGAA 1857
consensus_9251#1 GATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGG-CGAA 462
consensus_9251#2 -ATTTAANGTGTACAGTTTTCTCCCCTTCTTTATGTAAGCAATTTTAACATTTACTCGCC 415
** ** ** * *** * ** * * *** *** **
consensus_9251#0 TCTTGCGAGC----ACGATTAAACA--CGGCACACTGTGTAACTGTAGAGGATGGATGCT 1911
consensus_9251#1 TCTTGCGAGC----ACGATTAAACA--CGGCACACTGTGTAACTGTAGAGGATGGATGCT 516
consensus_9251#2 GTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTCATGGCAGAGAGAACGGAATTC 475
** * * ***** * *** **** ** **** * ***
consensus_9251#0 TTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATG 1971
consensus_9251#1 TTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATG 576
consensus_9251#2 TGAACGGGAACAGCAGCACAGTACAATACGTAGC----ACGGTATNAGGTTGTAGCTTTG 531
* * * * *** ** ** * * * * ** *** ** * * **
consensus_9251#0 CTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCT 2031
consensus_9251#1 CTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCT 636
consensus_9251#2 C----------------------------------------------------------- 532
*
consensus_9251#0 GCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCC 2091
consensus_9251#1 GCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCC 696
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 CTCTGTCTAAGCTTTTTGTTAGTGTATAAGTTTTAATTGTATAACTCGTATCCATAATCT 2151
consensus_9251#1 CTC--------------------------------------------------------- 699
consensus_9251#2 ------------------------------------------------------------
consensus_9251#0 TATTATTACTATTACTATTATTATATTATTATTTAACTTTTGCCTAATTTGTATAAGTAT 2211
consensus_9251#1 ------------------------------------------------------------
consensus_9251#2 ------------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||