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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9270#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1010 fasta sequence
[AATTGTTGTTCAATGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTCCTGCTGGAAGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATTGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCA-TCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG-TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA-GG-AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA-TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTC]
[+] EMBL CNS08VG9 [AATTGTTGTTCAATGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTCCTGCTGGAAGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATTGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTATACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCA TCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTTTCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGG AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTAC ]
[+] EMBL CNS09CRY [ CCCATTCGGAGTAAAGAGAGCA AATTCCTGCTGGAAGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATTGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGC CATTCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA GGCAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGAT ]
[-] EMBL CNS08VGA [ TTCCTTTCTTCACGATTGCTTTCAACTGAAGTGCTGTTTGTTTACATTAATTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCGCACGCAAACAACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAAAACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTAAAAAGCATCGGGCAG TAACGCTCACCAGCGCGACGAGCGCA TCCGGCGGCACTAGAACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTTTTAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA GG AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATGCTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGC ]
[-] EMBL CNS09CRZ [ TGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAAAACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAG TAACGCTCACCAGCGCGACGAGCGCA TCCGGCGGCACTAGAACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA GG AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTAGCTTTACTTC]
consensusID : consensus_9270#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 935 fasta sequence
[GGAGACAAAATCGATAGTGTTCAGCCGACACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA-GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT---AAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGTGGTTT]
[-] EMBL CNS0955Y [GGAGACAAAATCGATAGTGTTCAGCCCAAACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGAACTATCAAAAACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAG TAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGAACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTTTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCCCCCTCGAGTCGGACGGGCATTCGAAACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT AAA ]
[+] EMBL CNS0955X [ GATAGTGATCAGCCGACACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT AAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGTGGTTT]
[+] EMBL CNS09MSY [ CCGACACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGTGCC ]
[+] EMBL AGA282907 [ CCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGATGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAAAACGC GAAACGGCCGGACGCAAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAGCGATTCGATTCGCTTTACTTTCT AAAAAAAAAAAAAAAA ]
[-] EMBL CNS09MSZ [ GCCAGTTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCTTTTTAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTTTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTTTCTGGTCCTGTCCGAGGATGGGTCCGAACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGAAACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTT ]
[-] EMBL AGA280518 [ CCGGCGGCGAGCTGGAAAACGATGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT AAAAAAAA ]
consensusID : consensus_9270#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 894 fasta sequence
[CCGTGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCATAATAGATGATTGTCCACAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTC-----AACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGA]
[+] EMBL BM621159 [CCGTGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCATAATAGATGATTGTCCACAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTC AACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCG ]
[+] EMBL BM625114 [ ccgGCCCCATTCGGAGTAAAGAGAGCACAATTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCATAATAGATGATTGTCCACAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTC AACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAAACGACGAGCGTAGTGCGAACA ]
[+] EMBL BX609224 [ ACAATTCCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGG AAAACGATGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGA]
consensusID : consensus_9270#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 530 fasta sequence
[GATCGCCGAGGTTCTGCTGGAAGTGAGTAATAGCGCTGTTATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGT]
[+] EMBL AL931305 [GATCGCCGAGGTTCTGCTGGAAGTGAGTAATAGCGCTGTTATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGT]
[+] EMBL AGA282221 [ GCAGTGCTGTTTGTTTACACTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGGCAGCTGTGGCTATCTGTCCGTGTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9270#0 AATTGTTGTTCAATGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTCCTGCTGGA 60
consensus_9270#3 ---------------------------------------GATCGCCGAGGTTCTGCTGGA 21
consensus_9270#2 ------------------------------------------------------------
consensus_9270#1 ------------------------------------------------------------
consensus_9270#0 AGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATT-GC 119
consensus_9270#3 AGTGAGT--AATAGCGCTGTTA-TCGTTAAAGTGCCATTTTTCCTTTCTTCACGAT--GC 76
consensus_9270#2 ---------------------CCGTGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAA 39
consensus_9270#1 ------------------------------------------------------------
consensus_9270#0 TTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCG-CGCGTCACAATAGATGATTTCCCG 178
consensus_9270#3 TTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCG-CGCGTCACAATAGATGATTTCCCG 135
consensus_9270#2 TTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCG-CGCGTCATAATAGATGATTGTCCA 98
consensus_9270#1 --------GGAGACAAAATCGATAGTGTTCAGCCGACACACACGGATAGGGAAATT--AA 50
* * * * * ** ** ** * * **** * *
consensus_9270#0 CAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCG 238
consensus_9270#3 CAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCG 195
consensus_9270#2 CAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTCAAC-----ATATTCATCCG 153
consensus_9270#1 AAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCG 110
* ** ** * ** * ************ ***********
consensus_9270#0 TAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTT 298
consensus_9270#3 TAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTT 255
consensus_9270#2 TAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTT 213
consensus_9270#1 TAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTT 170
********************************** ** **********************
consensus_9270#0 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 358
consensus_9270#3 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 315
consensus_9270#2 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 273
consensus_9270#1 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 230
************************************************************
consensus_9270#0 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 418
consensus_9270#3 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 375
consensus_9270#2 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 333
consensus_9270#1 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 290
************************************************************
consensus_9270#0 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCC 478
consensus_9270#3 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCC 435
consensus_9270#2 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCC 393
consensus_9270#1 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCC 350
********************************************************* **
consensus_9270#0 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 538
consensus_9270#3 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 495
consensus_9270#2 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 453
consensus_9270#1 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 410
************************************************************
consensus_9270#0 TCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCC 598
consensus_9270#3 TCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGT------------------------- 530
consensus_9270#2 TCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCC 513
consensus_9270#1 TCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCC 470
***** * ***************************
consensus_9270#0 GTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTG 658
consensus_9270#3 ------------------------------------------------------------
consensus_9270#2 GTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTG 573
consensus_9270#1 GTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTG 530
consensus_9270#0 CCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGC 718
consensus_9270#3 ------------------------------------------------------------
consensus_9270#2 CCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGC 633
consensus_9270#1 CCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGC 590
consensus_9270#0 GAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAA 778
consensus_9270#3 ------------------------------------------------------------
consensus_9270#2 GAGCTGGAAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGA 693
consensus_9270#1 GAGCTGGAAAA-CGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGA 649
consensus_9270#0 AGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCC 838
consensus_9270#3 ------------------------------------------------------------
consensus_9270#2 AAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGC 753
consensus_9270#1 AAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGC 709
consensus_9270#0 GACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAAC 898
consensus_9270#3 ------------------------------------------------------------
consensus_9270#2 CGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAA 813
consensus_9270#1 CGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAA 769
consensus_9270#0 CGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGA 958
consensus_9270#3 ------------------------------------------------------------
consensus_9270#2 CCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTG 873
consensus_9270#1 CCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTG 829
consensus_9270#0 TTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTC-------- 1010
consensus_9270#3 ------------------------------------------------------------
consensus_9270#2 ATTTTGTGCGCGCTTTTCGGA--------------------------------------- 894
consensus_9270#1 ATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCTAAAAA 889
consensus_9270#0 ----------------------------------------------
consensus_9270#3 ----------------------------------------------
consensus_9270#2 ----------------------------------------------
consensus_9270#1 AAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGTGGTTT 935
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||