|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9275#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1830 fasta sequence
[TAGGTAGTAGAGGTACGGTATACCTCCGTATATGTACGATCGAAATCCATCAGTAAACCTAACGTCCTGTGAATTACCTTTAGCACTTTTAATGAATTCCACCAGCCATACAGCAAGATACGAACGATCGTTACTATCATCTTTCTGTTGTTGTTTGCGTTGGTTGTGCTTCCGTTCCCAACGCTCCCCCACTGCCACAATCGGGTCTGTGGGTTTTATTGCCCAGAATTTCCCCTGCTGTTTACCAAACGAACAGGTTTTTTTTTCTACACACCCAGACATTCGTGCGAGGGGTAAGTGAGTTGTTGTGCGATGCGCGCGCTGCATTCTGTATTAAGACGC--GAGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG-TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG-AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC-GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGGACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCCGGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTATCTCGGCTACTGCGAGTTCTGCCACAATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCGTACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAACTACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTATAGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAAACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACGACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCTTAACACACGCATTGTGTAATGTATTTTATAATAC-AAAAATAAAGGCAAATTGCAACCC]
[+] EMBL BX603939 [TAGGTAGTAGAGGTACGGTATACCTCCGTATATGTACGATCGAAATCCATCAGTAAACCTAACGTCCTGTGAATTACCTTTAGCACTTTTAATGAATTCCACCAGCCATACAGCAAGATACGAACGATCGTTACTATCATCTTTCTGTTGTTGTTTGCGTTGGTTGTGCTTCCGTTCCCAACGCTCCCCCACTGCCACAATCGGGTCTGTGGGTTTTATTGCCCAGAATTTCCCCTGCTGTTTACCAAACGAACAGGTTTTTTTTTCTACACACCCAGACATTCGTGCGAGGGGTAAGTGAGTTGTTGTGCGATGCGCGCGCTGCATTCTGTATTAAGACGC GAGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTTCTGTGCTGGAATTGAAGCT ]
[+] EMBL BX602579 [ CGCGCTGCATTCTGTATTAAGACGC GAGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAAGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGG ]
[+] EMBL BM612190 [ ccgcgGACGCGTGGGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTG TTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGCGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTCGACGGCATCGAAGCTGGTGTGGCTCTATCCGGGCAACTTTGATCGGGGGCGGCGCTGTGGA ]
[+] EMBL CNS09RGV [ CGC GAGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGATATCTCGCGCATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGGACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATC ]
[+] EMBL CNS08UU1 [ AGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGGGTA CACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGAAGGACT ]
[+] EMBL CNS094RK [ CGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGGACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGG ]
[+] EMBL BX604304 [ CGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAATGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCA ]
[+] EMBL BX607046 [ cgCATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATA ]
[+] EMBL BM588169 [ ccgCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAG ]
[-] EMBL CNS09RGW [ CATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGTTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTTTCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCAGTCGGGTACCACCAGGAGGAGCTGAACGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCACCCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGAACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCCGGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTATCTCGGCTACTGCGAGTTCTGCCACAATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCGTACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAACTACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTATAGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAAACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACGACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCTTAACACACGCATTGTGTAATGTATTTTATAATACAAAAAATAA ]
[-] EMBL CNS08UU2 [ atatatATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGAACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCCGGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTTTCTCGGCTACTGCGAGTTCTGCCACAATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCGTACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAACTACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTATAGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAAACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACGACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCATAACACACGCATTGTGTAATGTATTTTATAATAC AAAAATAAAGGCAAATTGCAACCC]
consensusID : consensus_9275#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTGGGGGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAAAGAAAAAGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTCCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGC]
[+] EMBL BM637459 [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTGGGGGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAAAGAAAAAGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTCCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGC]
consensusID : consensus_9275#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence
[TGNAATTACGCTCAGCCAGAATCGGCCGAGGCNGNGTACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTAGTGGTTTGAAACATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAAGCGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCT]
[+] EMBL BX466345 [TGNAATTACGCTCAGCCAGAATCGGCCGAGGCNGNGTACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTAGTGGTTTGAAACATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAAGCGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCT]
consensusID : consensus_9275#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 340 fasta sequence
[CCCGAGGTTTTAGCGCGACAACACGCATCTCGCGGACACTGGTTGTCGGTGGTAGCACCTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACAATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGG]
[+] EMBL AL929886 [CCCGAGGTTTTAGCGCGACAACACGCATCTCGCGGACACTGGTTGTCGGTGGTAGCACCTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACAATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGG]
consensusID : consensus_9275#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 282 fasta sequence
[GGCCAAGAATCGCAGAGGTAACACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACCATAGGAGAAACAGGTGCTAAAACAAAATAGAACATCCCATCGGTTAATTGGAAAGGGTTCGGTTGGTCCTTGGTTGGTTTCTGGCTCCATTGAAGGCCAGGCCCTTTGGCGCCTTGGGCCTGGCTTGGAAAAACCCCCGGGTTTNTTCC]
[+] EMBL AL697262 [GGCCAAGAATCGCAGAGGTAACACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACCATAGGAGAAACAGGTGCTAAAACAAAATAGAACATCCCATCGGTTAATTGGAAAGGGTTCGGTTGGTCCTTGGTTGGTTTCTGGCTCCATTGAAGGCCAGGCCCTTTGGCGCCTTGGGCCTGGCTTGGAAAAACCCCCGGGTTTNTTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 TAGGTAGTAGAGGTACGGTATACCTCCGTATATGTACGATCGAAATCCATCAGTAAACCT 60
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 AACGTCCTGTGAATTACCTTTAGCACTTTTAATGAATTCCACCAGCCATACAGCAAGATA 120
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 CGAACGATCGTTACTATCATCTTTCTGTTGTTGTTTGCGTTGGTTGTGCTTCCGTTCCCA 180
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 ACGCTCCCCCACTGCCACAATCGGGTCTGTGGGTTTTATTGCCCAGAATTTCCCCTGCTG 240
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 TTTACCAAACGAACAGGTTTTTTTTTCTACACACCCAGACATTCGTGCGAGGGGTAAGTG 300
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAGCGCGACAAC--ACGC 46
consensus_9275#3 -------------------------------CCCG-AGGTTTTAGCGCGACAAC--ACGC 26
consensus_9275#0 AGTTGTTGTGCGATGCGCGCGCTGCATTCTGTATTAAGACGCGAGCGCGACAAC--ACAC 358
consensus_9275#2 -------------------TGNAATTACGCTCAGCCAGAATCGGCCGAGGCNGNGTACGC 41
consensus_9275#4 --------------------------------GGCCAAGAATCGCAGAGGTAACACACGC 28
* * ** *
consensus_9275#1 ATCTCG-GGACACTGGTTGTCGGTGGTAGCAACCTTGTTTGG-GGGCTGGAATTGAAGCT 104
consensus_9275#3 ATCTCGCGGACACTGGTTGTCGGTGGTAGCA--CCTGTTTCT-GTGCTGGAATTGAAGCT 83
consensus_9275#0 ATCTCG-GGACACTGGCTGTCGGTGGTAGCAACCTTGTTTCT-GCGCTGGAATTGAAGCT 416
consensus_9275#2 ATCTCG-GGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTTGTGCTGGAATTGAAGCT 100
consensus_9275#4 ATCTCG-GGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCT-GTGCTGGAATTGAAGCT 86
****** ********* ************** * ***** * ***************
consensus_9275#1 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTT-GTGGTTTGAAACA-TAAAGAAAA-- 160
consensus_9275#3 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTT-GTGGTTTGAAACAATAGAGAAAA-- 140
consensus_9275#0 TTTGCCAAGTGAAAATCATGTTCGCTACTTAGTT-GTGGTTTGAAACA-TAGAGAAAA-- 472
consensus_9275#2 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTAGTGGTTTGAAACA-TAGAGAAAA-- 157
consensus_9275#4 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTT-GTGGTTTGAAACCATAGGAGAAACA 145
************************** ******* ************ ** ***
consensus_9275#1 AGTGCTAAAC--AAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTCCTCA 218
consensus_9275#3 GGTGCTAAAC--AAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCA 198
consensus_9275#0 GGTGCCAAGC--AAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAA 530
consensus_9275#2 GGTGCTAAAC--AAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCA 215
consensus_9275#4 GGTGCTAAAACAAAATAGAACATCCCATCG--GTTAATTGGAAAGGGTTCGGTTGGTCCT 203
**** ** ****************** * ** * * * * *
consensus_9275#1 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 278
consensus_9275#3 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 258
consensus_9275#0 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 590
consensus_9275#2 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 275
consensus_9275#4 TGGTTGGTTTCTGGCT--CCATTGAAGGCCAGGCCCTTTGGCGCCTTG-GGCCTGGCTTG 260
** * * *** * **** ** * * ** * * * * *****
consensus_9275#1 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAA-CGACATCCCGGGCAACCTTTGCTCG 337
consensus_9275#3 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAA-CGACATCCCGGGCAACCTTTGCTCG 317
consensus_9275#0 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAA-CGACATCCCGGGCAACCTTTGCTCG 649
consensus_9275#2 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAAGCGACATCCCGGGCAACCTTTGCTCG 335
consensus_9275#4 GAAAAACCCCCG-----GGTTTNTTCC--------------------------------- 282
* * ** * **** ****
consensus_9275#1 CACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAG 397
consensus_9275#3 CACGTCGTCTACAACTTCCTCGG------------------------------------- 340
consensus_9275#0 CACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAG 709
consensus_9275#2 CACGTCGTCTACAACTTCCT---------------------------------------- 355
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 CCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTC 457
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 CCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTC 769
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 CCCCACCTGAAGCTGCTGATCGC------------------------------------- 480
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 CCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGT 829
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 GAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTG 889
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 CACCAGTACCGGCTGGACGGCATCGAGCTGGTGTGGCTCTATCCGGGCAACTTCGATCGG 949
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 GGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTG 1009
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 GTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGC 1069
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 ATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTC 1129
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 GGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCC 1189
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 CGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAG 1249
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 GACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGC 1309
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 CGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCC 1369
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 GGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTATCTCGGCTACTGCGAGTTCTGCCAC 1429
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 AATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCG 1489
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 TACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAAC 1549
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 TACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTAT 1609
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 AGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAA 1669
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 ACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACG 1729
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 ------------------------------------------------------------
consensus_9275#3 ------------------------------------------------------------
consensus_9275#0 ACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCTTAACACACGCATTGTGT 1789
consensus_9275#2 ------------------------------------------------------------
consensus_9275#4 ------------------------------------------------------------
consensus_9275#1 -----------------------------------------
consensus_9275#3 -----------------------------------------
consensus_9275#0 AATGTATTTTATAATACAAAAATAAAGGCAAATTGCAACCC 1830
consensus_9275#2 -----------------------------------------
consensus_9275#4 -----------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||