cluster # 9288

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Anopheles gambiae
cluster # 9288 cluster # 9288 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9288#0 length = 1758 sequences # 8
consensus_9288#1 length = 958 sequences # 4

consensus_9288#2 length = 710 sequences # 1
consensus_9288#3 length = 393 sequences # 1
consensus_9288#4 length = 363 sequences # 1

consensusID : consensus_9288#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1758
fasta sequence

                              [CCGCCCACGCGTCCGAACGAATCATGACAACCACAATTACCCATCCCAGTTTATCATCGGACATTCATTCTTAAACAAAGCTGTGTTTGTGTTTGCCGAGCTATGGATTGGCTATAATATATAAATCGGAACATAAGTGTGCTACGGTGTGTTAACGAGGCAAGGTTCTTATTGGCGGTGTAACAATCTTACATAATCCAAGTTTGTGAACAACAATTGATTTTTCTCGTTCTGTCTGCGTAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGATGAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATAGCGGATATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTCGATTTTGATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAGTACATGATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGAAAAAACATCAAACCAAACAACGTGCTGAAAATATTAGACATAGCGTACAGGATGAACTTGGACGATATTATATACTCATGTATGTGTGTGTTGAAAACACTTTTTTTCATCNGGAATGAGCTTGAGTAACATCATCCTGGAAAGAAGCCATCATCTATCGAAAAATTGTGTCGATCTGATACTGGAAGATAACTTTGAAGNTAAGGATAATATAATATGTATGATACGTGCCTGGTGTATTACGGAGTGCGAACAAAATCGGTTAGAAATCAACAGTGATAGTATGAAAACAGTTCTGCAAGATATTGAATTACCCGATACATTGAAAGACACGATTGTTGGATGCAGTTTTACCAACTTTACACCTATTGCAGGCGACAATACAGGTTGGATACCTGTACATCGCATCCATTATAAAGCAGTTAGTCCACTGATTATCGGGGATGAGATGGACTTCGAAGCCAATATTAGTACGAACCGATTTATCGTGATAAAATCGTTAAGCTTGAACAGTCGGCTTCTTCCGCAGCTAAAAGTATCGGAAGTGCGACAGGAGACGTACACAGAAAAACTAACTGTTGAAATTTCTTCTAAACATAGCAATGATCGGAAGAAGATCTATCATAAGGAACACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAGCTTGACCGAACAAATTGTCTTCTTTCCGGATGTGATATACATTATCCGTATTAAATGGGACCCAGATAGTCTAGGCTACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAAGCAGCTAATGGTGAATTTTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAATGGCATAGTTTGCAACCTTTACAAGTGAATTCTCCGCAAAGTAGCTAATCTCCACTAGATGGTCGCATTTGATACGCTAGTACTGATAATTCAAATCACAAAAATGATTCAAATAAAACTGTAAACCAACGCACTTGGTTTTTGAAGCATAAAAA]

[+] EMBL BM644576             [CCGCCCACGCGTCCGAACGAATCATGACAACCACAATTACCCATCCCAGTTTATCATCGGACATTCATTCTTAAACAAAGCTGTGTTTGTGTTTGCCGAGCTATGGATTGGCTATAATATATAAATCGGAACATAAGTGTGCTACGGGGTGTTAACGAAGCGAGGTTCTTATTGGCAGAGTAACAATCTTACATAATCCAAGTTTGGGAACAACAATTGATTTTTCTCGATCTGTCTGCGGAGCTGCTGCTTGCATGGCGGCGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGGTGTAAGCAGAGGGCTTTACTGTCTCCATTCATTTATCATCTTGAACATCGTGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM613997             [                                                                                                                    ccgTATAAATCGTAACATAAGTGTGCTACGGTGTGTTAACGAGGCAAGGTTCTTATTGGCGGTGTAACAATCTTACATAATCCAAGTTTGTGAACAACAATTGATTTTTCTCGTTCTGTCTGCGTAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGATGAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATAGCGGATATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTCGATTTTGATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAGTACATGATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGAAAAAACATCAAACCAAACAACGTGCTGAAAATATTAGACATAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX625641             [                                                                                                                                 AACATAAGTGTGCTACGGTGTGTTAACGAGGCAAGGTTCTTATTGGCGGTGTAACAATCTTACATAATCCAAGTTTGTGAACAACAATTGATTTTTCTCGTTCTGTCTGCGTAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGATGAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATAGCGGATATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTCGATTTTGATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAGTACATGATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGAAAAAACATCAAACCAAACAACATGCTGAAAATATTAGACATAGCGTACAGGATGAACTTGGACGATATTATATACTCATGTATGTGTGTGTTGAAAACACTTTTTTTCATCNGGAATGAGCTTGAGTAACATCATCCTGGAAAGAAGCCATCATCTATCGAAAAATTGTGTCGATCTGATACTGGAAGATAACTTTGAAGNTAAGGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09J3D             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGATATTATATACTCATGTATGTGTGTGTTG AAACAC TTTTTTCATCGGGAATGAGCTTGAGTAACATCATCCTGGAAAGAAGCCATCATCTATCGAAAAATTGTGTCGATCTGATACTGGAAGATAACTTTGAAGTTAAGGATAATATAATATGTATGATACGTGCCTGGTGTATTACGGAGTGCGAACAAAATCGGTTAGAAATCAACAGTGATAGTATGAAAACAGTTCTGCAAGATATTGAATTACCCGATACATTGAAAGACACGATTGTTGGATGCAGTTTTACCAACTTTACACCTATTGCAGGCGACAATACAGGTTGGATACCTGTACATCGCATCCATTATAAAGCAGTTAGTCCACTGATTATCGGGGATGAGATGGACTTCGAAGCCAATATTAGTACGAACCGATTTATCGTGATAAAATCGTTAAGCTTGAACAGTCGGCTTCTTCCGCAGCTAAAAGTATCGGAAGTGCGACAGGAGACGTACACAGAAAAACTAACTGTTGAAATTTCTTCTAAACATAGCAATGATCGGAAGAAGATCTATCATAAGGAACACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAGCTTGACCGAACAAATTGTCTTCTTTCCGGATGTGATATACATTATCCGTATTAAATGGGACCCAGATAGTCTAGGCTACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAAGCAGCCCCCGGGGAATTTTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAATGGCATAGTTTGCAACCTTTACAAGTGAATTCTCCGCAAAGTAGCTAATCTCCACTAGATGGTCGCATTTGATACGCTAGTACTGATAATTCAAATCACAAAAATGATTCAAATAAAACTGTAAACCAACGCACTTGGT                ]
[+] EMBL BX617050             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGATGCAGTTTTACCAACTTTACACCTATTGCAGGCGACAATACAGGTTGGATACCTGTACATCGCATCCATTATAAAGCAGTTAGTCCACTGATTATCGGGGATGAGATGGACTTCGAAGCCAATATTAGTACGAACCGATTTATCGTGATAAAATCGTTAAGCCTGAACAGTCGGCTTCTTCCGCAGCTAAAAGTATCGGAAGTGCGACAGGAGACGTACACAGAAAAACTAACTGTTGAAATTTCTTCTAAACATAGCAATGATCGGAAGAAGATCTATCATAAGGAACACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAGCTTGACCGAACAAATTGTCTTCTTTCCGGATGTGATATACATTATCCTTATTAAATGGGACCCAGATAGTCTAGGCTACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAAGCAGCTAATGGTGAATTTTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAATGGCATAGTTTGCAACCTTTACAAGTGAATTCTCCGCAAAGTAGCTAATCTCCACTAGATGGTCGCATTTGATACGCTAGTACTGATAATTCAAATCACAAAAATGATTCAAATAAAACTGTAAACCAACGCACTT                   ]
[-] EMBL CNS09LH5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTTACACCTATTGCAGGCGACAATACAGGTTGGATACCTGTACATCGCATCCATTATAAAGCAGTTAGTCCACTGATTATCGGGGATGAGATGGACTTCGAAGCCAATATTAGTACGAACCGATTTATCGTGATAAAATCGTTAAGCTTGAACAGTCGGCTTCTTCCGCAGCTAAAAGTATCGGAAGTGCGACAGGAGACGTACACAGAAAAACTAACTGTTGAAATTTCTTCTAAACATAGCAATGATCGGAAGAAGATCTATCATAAGGAACACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAGCTTGACCGAACAAATTGTCTTCTTTCCGGATGTGATATACATTATCCGTATTAAATGGGACCCAGATAGTCTAGGCTACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAAGCAGCTAATGGTGAATTTTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAATGGCATAGTTTGCAACCTTTACAAGTGAATTCTCCGCAAAGTAGCTAATCTCCACTAGATGGTCGCATTTGATACGCTAGTACTGATAATTCAAATCACAAAAATGATTCAAATAAAACTGTAAACCAACGCACTTGGTTTTTGAAGCATAAAAA]
[+] EMBL BX612050             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGACAATACAGGTTGGATACCTGTACATCGCATCCATTATAAAGCAGTTAGTCCACTGATTATCGGGGATGAGATGGACTTCGAAGCCAATATTAGTACGAACCGATTTATCGTGATAAAATCGCTAAGCCTGAACAGTCGGCTTCTTCCGCAGCTAAAAGTATCGGAAGTGCGACAGGAGACGTACACAGAAAAACTAACTGTTGAAATTTCTTCTAAACATAGCAATGATCGGAAGAAGATCTATCATAAGGAACACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAGCTTGACCGAACAAATTGTCTTCTTTCCGGATGTTATATACATTATCCGTATTAAATGGGACCCAGATAGTCTAGGCTACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAAGCAGCTAATGGTGAATTTTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAATGGCATAGTTTGCAACCTTTACAA                                                                                                                                   ]
[-] EMBL CNS08RV0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTATCATAAGGAACACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAGCTTGACCGAACAAATTGTCTTCTTTCCGGATGTGATATACATTATCCGTATTAAATGGGACCCAGATAGTCTAGGCTACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAAGCAGCTAATGGTGAATTTTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAATGGCATAGTTTGCAACCTTTACAAGTGAATTCTCCGCAAAGTAGCTAATCTCCACTAGATGGTCGCATTTGATACGCTAGTACTGATAATTCAAATCACAAAAATGATTCAAATAAAACT TAAACCAA                          ]




>consensus_9288#0
CCGCCCACGCGTCCGAACGAATCATGACAACCACAATTACCCATCCCAGTTTATCATCGG
ACATTCATTCTTAAACAAAGCTGTGTTTGTGTTTGCCGAGCTATGGATTGGCTATAATAT
ATAAATCGGAACATAAGTGTGCTACGGTGTGTTAACGAGGCAAGGTTCTTATTGGCGGTG
TAACAATCTTACATAATCCAAGTTTGTGAACAACAATTGATTTTTCTCGTTCTGTCTGCG
TAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTT
AAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAA
CATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCAACACACTGATTTTGG
GCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGA
TGAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTTCGAAGC
CATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATAGCGGATATCAATTCCAG
AGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTCGATTTTGATGGCATACA
AAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAGTACATGATTGATAGCTT
GCACGAAAAATGCGTCAACTACTTCGGAAAAAACATCAAACCAAACAACGTGCTGAAAAT
ATTAGACATAGCGTACAGGATGAACTTGGACGATATTATATACTCATGTATGTGTGTGTT
GAAAACACTTTTTTTCATCNGGAATGAGCTTGAGTAACATCATCCTGGAAAGAAGCCATC
ATCTATCGAAAAATTGTGTCGATCTGATACTGGAAGATAACTTTGAAGNTAAGGATAATA
TAATATGTATGATACGTGCCTGGTGTATTACGGAGTGCGAACAAAATCGGTTAGAAATCA
ACAGTGATAGTATGAAAACAGTTCTGCAAGATATTGAATTACCCGATACATTGAAAGACA
CGATTGTTGGATGCAGTTTTACCAACTTTACACCTATTGCAGGCGACAATACAGGTTGGA
TACCTGTACATCGCATCCATTATAAAGCAGTTAGTCCACTGATTATCGGGGATGAGATGG
ACTTCGAAGCCAATATTAGTACGAACCGATTTATCGTGATAAAATCGTTAAGCTTGAACA
GTCGGCTTCTTCCGCAGCTAAAAGTATCGGAAGTGCGACAGGAGACGTACACAGAAAAAC
TAACTGTTGAAATTTCTTCTAAACATAGCAATGATCGGAAGAAGATCTATCATAAGGAAC
ACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAGCTTGACCGAACAAATTG
TCTTCTTTCCGGATGTGATATACATTATCCGTATTAAATGGGACCCAGATAGTCTAGGCT
ACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAAGCAGCTAATGGTGAATT
TTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAATGGCATAGTTTGCAACC
TTTACAAGTGAATTCTCCGCAAAGTAGCTAATCTCCACTAGATGGTCGCATTTGATACGC
TAGTACTGATAATTCAAATCACAAAAATGATTCAAATAAAACTGTAAACCAACGCACTTG
GTTTTTGAAGCATAAAAA

consensusID : consensus_9288#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 958
fasta sequence

                              [GGAGAGTAGCCCAACAACCGTGGCAGCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTCGATTATTTGATGTGTGCAAAACAAAAATTGTGTTATTACGTGCTATCCGCTACAGTTTAATCTTTCAACATTGAGTTGAACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGAATCGAAACGAATCAGACAACCACAATTACCCATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTGTTTGTGTTTTCCAAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTAACGAGGCAAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGATGAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATAGCGGATATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTCGATTTTGATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAGTACATGATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGA]

[+] EMBL CNS09LH4             [GGAGAGTAGCCCAACAACCGTGGCAGCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTCGATTATTTGATGTGTGCAAAACAAAAATTGTGTTATTACGTGCTATCCGCTACAGTTTAATCTTTCAACATTGAGTTGAACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGAATCGAAACGAATCAGACAACCACAATTACCCATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTGTTTGTGTTTTCCAAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS09J3C             [                    TGGCAGCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAG GTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTCGATTATTTGATGTGTGCAAAACAAAAATTGTGTTATTCCGGGCTATCCGCTACAGTTTAATCTTTCAACATTGAGTTGAACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGAATCGAAACGAATCAGACAACCACAATTACCCATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTGTTTGTGTTTTCCAAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTAACGAGGCAAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGATGAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATAGCGGATATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTCGATTTTGATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAGTACATGATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGA]
[+] EMBL BX606741             [                          CAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTCGATTATTTGATGTGTGCAAAACAAAAATTGTGTTATTACGTGCTATCCGCTACAGTTTAATCTTTCAACATTGAGTTGAACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGAATCGAAACGAATCAGACAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM646956             [                                                                                                                                                                                                                                                                                                                                                                 TCATTCTTAAACAAAGCTGTGTTTGTGTTTGCCAAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTAACG     AGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTTTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGCACAGGGAG                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_9288#1
GGAGAGTAGCCCAACAACCGTGGCAGCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGC
GCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAA
GCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTCGATTATTTGATGTGTG
CAAAACAAAAATTGTGTTATTACGTGCTATCCGCTACAGTTTAATCTTTCAACATTGAGT
TGAACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGA
ATCGAAACGAATCAGACAACCACAATTACCCATCCCAGTTTATCAGCGGTCATTCATTCT
TAAACAAAGCTGTGTTTGTGTTTTCCAAGCTATGGCTTGGCTATAATATATAAATCGTAA
CATAAGTGTGCTACGGTGTGTTAACGAGGCAAGCTGCTGCTTGCATGGCGGTGGAGATTG
AAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCC
ATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGG
AGTGTTGGAAAATCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAA
ACACCTAGTCGATTGTTCATTCAGCGTAGATGAAGATGTTTATCATTGCCACAAGCTTAT
CCTGTCAGCCGCGAGCCCAGTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCA
GACGGTACAAATAGCGGATATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTA
CGTTGGAGCAGTCGATTTTGATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTA
TTGCGCAGAAAAGTACATGATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGA

consensusID : consensus_9288#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 710
fasta sequence

                              [CCGGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTTGATTATTTGATATGTGCAAAACAAAAATTGTGTTATTACGTGGTATCCGCTACAGTTTAAACTTTCAACATTGAGTTGCACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAGAACAAGAATCGAAACGATTCAGACAACCACAATTACCCATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTGTTTCAGTCTATCGTGTTTACCTCTGGATGATAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTTACGAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGGTGCATCCGTACAGGGCAGTGGTGGAAAATCAACACACTGATTTCGGGCAACGGTTCAACGAGATGCGAAAAAAGAAACACCCTAGTCGATTGTTCATTCAGCGTAAAATGAAAAATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTT]

[+] EMBL BM601342             [CCGGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTTGATTATTTGATATGTGCAAAACAAAAATTGTGTTATTACGTGGTATCCGCTACAGTTTAAACTTTCAACATTGAGTTGCACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAGAACAAGAATCGAAACGATTCAGACAACCACAATTACCCATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTGTTTCAGTCTATCGTGTTTACCTCTGGATGATAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTTACGAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGGTGCATCCGTACAGGGCAGTGGTGGAAAATCAACACACTGATTTCGGGCAACGGTTCAACGAGATGCGAAAAAAGAAACACCCTAGTCGATTGTTCATTCAGCGTAAAATGAAAAATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTT]




>consensus_9288#2
CCGGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGG
CGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTTGATTATT
TGATATGTGCAAAACAAAAATTGTGTTATTACGTGGTATCCGCTACAGTTTAAACTTTCA
ACATTGAGTTGCACAAATCCTATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACAC
AGAACAAGAATCGAAACGATTCAGACAACCACAATTACCCATCCCAGTTTATCAGCGGTC
ATTCATTCTTAAACAAAGCTGTGTTTCAGTCTATCGTGTTTACCTCTGGATGATAGCTAT
GGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTTACGAGCTGCT
GCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTA
AGCAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTT
CCCAGGGTGCATCCGTACAGGGCAGTGGTGGAAAATCAACACACTGATTTCGGGCAACGG
TTCAACGAGATGCGAAAAAAGAAACACCCTAGTCGATTGTTCATTCAGCGTAAAATGAAA
AATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCAGTTTT

consensusID : consensus_9288#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 393
fasta sequence

                              [GCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTTTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGATGCCGATGTTTATCATTGCCACAAGCTTATCCTG]

[+] EMBL CNS08RUZ             [GCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGCGCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTGGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAAGTTGTAAGCAAAGGGTTTTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCCAACACACTGATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGATGCCGATGTTTATCATTGCCACAAGCTTATCCTG]




>consensus_9288#3
GCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGCGCGGTACAAGCAGAAAGCAGAAACA
TAAAATCATTTTCACTGCATCCCCGGCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCCGTG
GCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGTTAA
GTTGTAAGCAAAGGGTTTTACTGTCTCCATTCATTTAGCATCTTGAACATCGTGACAACA
TGTGTTCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCCAACACACTGATTTTGGG
CAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGTTCATTCAGCGTAGAT
GCCGATGTTTATCATTGCCACAAGCTTATCCTG

consensusID : consensus_9288#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 363
fasta sequence

                              [TTNGTTAATTGTCGAGCAGAATCGCACGAGGTGNAACATTGAGTTGAACAAATCCTCATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGAATCGAAACGAATCAGACAACCACAATTNGNCGATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTGTTTGTGTTTTCCAAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTAACGAGCTGCTGCTTGCATGGCGGTGTGACGATTGAACGCGTCGGGCGGTAACGAANACGTTTGTGTNTCCNGTTGTAAAGCCCAAGGGTTCTACTGGTCCTCCAGATTCATTNA]

[+] EMBL BX469399             [TTNGTTAATTGTCGAGCAGAATCGCACGAGGTGNAACATTGAGTTGAACAAATCCTCATGTAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGAATCGAAACGAATCAGACAACCACAATTNGNCGATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTGTTTGTGTTTTCCAAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTACGGTGTGTTAACGAGCTGCTGCTTGCATGGCGGTGTGACGATTGAACGCGTCGGGCGGTAACGAANACGTTTGTGTNTCCNGTTGTAAAGCCCAAGGGTTCTACTGGTCCTCCAGATTCATTNA]




>consensus_9288#4
TTNGTTAATTGTCGAGCAGAATCGCACGAGGTGNAACATTGAGTTGAACAAATCCTCATG
TAACATCTTCGCGAGTCGCATTTTTCTATCGTACACAAAACAAGAATCGAAACGAATCAG
ACAACCACAATTNGNCGATCCCAGTTTATCAGCGGTCATTCATTCTTAAACAAAGCTGTG
TTTGTGTTTTCCAAGCTATGGCTTGGCTATAATATATAAATCGTAACATAAGTGTGCTAC
GGTGTGTTAACGAGCTGCTGCTTGCATGGCGGTGTGACGATTGAACGCGTCGGGCGGTAA
CGAANACGTTTGTGTNTCCNGTTGTAAAGCCCAAGGGTTCTACTGGTCCTCCAGATTCAT
TNA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9288#2      ---------------------------------------------------CCGGTCAGC 9
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      GGAGAGTAGCCCAACAACCGTGGCAGCAGAGTGCGCCGACGTCGTATTTGCGTCGTCAGC 60
consensus_9288#0      -----------------------------------------------------------C 1
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      GCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAA 69
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      GCGGTACAAGCAGAAAGCAGAAACATAAAATCATTTTCACTGCATCCCCGGCGCTGCAAA 120
consensus_9288#0      CGCCCACGCGTCCGAACGAATCATGACAACCACAATTACCCATCCCAGTTTATCATCGGA 61
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      GCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTTGATTATTTGATATGTG 129
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      GCGTCTGTGCTGGTTTGCTGCCGTGGGTAGGATACAGTTCCGTCGATTATTTGATGTGTG 180
consensus_9288#0      CATTCATTCTTAAACAAAGCTGTGTTTGTGTTTGCCGAGCTATGGATTGGCTATAATATA 121
consensus_9288#3      -----------------------------------------------------------G 1
                                                                                  

consensus_9288#2      CAAAACAAAAATTGTGTTATTACGTGGTATCCGCTACAGTTTAAACTTTCAACATTGAGT 189
consensus_9288#4      ---------------TTNGTTAATTGTCGAGCAGAATCGCACGAGGTGN-AACATTGAGT 44
consensus_9288#1      CAAAACAAAAATTGTGTTATTACGTGCTATCCGCTACAGTTTAATCTTTCAACATTGAGT 240
consensus_9288#0      TAAATCGGAACATAAGTGTGCTACGGTGTGTTAACGAGGCA-AGGTTCTTATTGGCGGTG 180
consensus_9288#3      CAGAGTGCGCCGACGTCGTATTTGCGT-CGTCAGCGCGGTACAAGCAGAAAGCAGAAACA 60
                                               *            *           *         

consensus_9288#2      TGCACAAATCCT-ATGTAACATCTTCGCGAGTCGCATTTT-TCTATCGTACACAGAACAA 247
consensus_9288#4      TGAACAAATCCTCATGTAACATCTTCGCGAGTCGCATTTT-TCTATCGTACACAAAACAA 103
consensus_9288#1      TGAACAAATCCT-ATGTAACATCTTCGCGAGTCGCATTTT-TCTATCGTACACAAAACAA 298
consensus_9288#0      T-AACAATCTTACATAATCCAAGTTTGTGAACAACAATTGATTTTTCTCGTTCTGTCTGC 239
consensus_9288#3      T-AA-AATCATTTTCACTGCATCCCCG-GCGCTGCAAAGCGTCTGTGCTGGTTTGCTGCC 117
                      *  * **            **     * *     **     * * *              

consensus_9288#2      G-AATCGAAACGATTCAGACAACCACAATTA-CCCATCCCAGTTTATCAGCGGTC---AT 302
consensus_9288#4      G-AATCGAAACGAATCAGACAACCACAATTNGNCGATCCCAGTTTATCAGCGGTC---AT 159
consensus_9288#1      G-AATCGAAACGAATCAGACAACCACAATTA-CCCATCCCAGTTTATCAGCGGTC---AT 353
consensus_9288#0      GTAGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGT 299
consensus_9288#3      GTGGCTGCTGCTTGCATGGCGGTGGAGATTGAAGCGTCGGCCGTAACGAAAAGTTTGTGT 177
                      *     *   *      * *       ***      **     * *  *   **     *

consensus_9288#2      TCATTCTTAAACAAAGCTGTGTTTCAGTCTATCGTGTTTACCTCTGGATGATAGCTATGG 362
consensus_9288#4      TCATTCTTAAACAAAGCTGTGTTT---------GTGTTTTCCA---------AGCTATGG 201
consensus_9288#1      TCATTCTTAAACAAAGCTGTGTTT---------GTGTTTTCCA---------AGCTATGG 395
consensus_9288#0      TAAGTTGTAAGCAAAGGGTTCTAC----------TGTCTCCATTCATTTAGCATCTTGAA 349
consensus_9288#3      TAAGTTGTAAGCAAAGGGTTTTAC----------TGTCTCCATTCATTTAGCATCTTGAA 227
                      * * *  *** *****   * *            *** * *           * **    

consensus_9288#2      CTTGGCTATAATATATAAATCGTAACATAAGTGTGC-TACGGTGTGTTTACGAG------ 415
consensus_9288#4      CTTGGCTATAATATATAAATCGTAACATAAGTGTGC-TACGGTGTGTTAACGAG------ 254
consensus_9288#1      CTTGGCTATAATATATAAATCGTAACATAAGTGTGC-TACGGTGTGTTAACGAGGC-AAG 453
consensus_9288#0      CATCGTGACAACATGTGT-TCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATC-AAC 407
consensus_9288#3      CATCGTGACAACATGTGT-TCCCAGGCTGCATCCGTACAGGGAGTGTTGGAAAATCCAAC 286
                      * * *  * ** ** *   **  *   *   *  *   * ** *****    *       

consensus_9288#2      CTGCTGCTTGCATGGCGGTG--GAGATTGAA-GCGTCGG-CCGTA-ACGAAAA-GTTTGT 469
consensus_9288#4      CTGCTGCTTGCATGGCGGTGTGACGATTGAACGCGTCGGGCGGTA-ACGAANACGTTTGT 313
consensus_9288#1      CTGCTGCTTGCATGGCGGTG--GAGATTGAA-GCGTCGG-CCGTA-ACGAAAA-GTTTGT 507
consensus_9288#0      ACACTGATTTTG-GGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGT 466
consensus_9288#3      ACACTGATTTTG-GGCAACGGTTCAACGAGATGCGGAAAAAGAAACACCTAGTCGATTGT 345
                         *** **    ***   *     *    * ***         * **  *   * ****

consensus_9288#2      GTTA--AGTTGTAAG--CAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATC 525
consensus_9288#4      GTNTCCNGTTGTAAAGCCCAAGGGTTCTACTGGTCCTCCAGATTCATTNA---------- 363
consensus_9288#1      GTTA--AGTTGTAAG--CAAAGGGTTCTACTGTCTCCATTCATTTAGCATCTTGAACATC 563
consensus_9288#0      TCATTCAGC-GTAGA--TGAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCG 523
consensus_9288#3      TCATTCAGC-GTAGA--TGCCGATGTTTATCATTGCCACAAGCTTATCCTG--------- 393
                             *  ***        *   * **      *       * *              

consensus_9288#2      GTGACAACATGTGTTCCCAGGGTGCATCCGTACAGGGCAGTGGTGGAAAATCAACACACT 585
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      GTGACAACATGTGTTCCCAGGCTGCATCCGTACAGGG-AGTGTTGGAAAATCAACACACT 622
consensus_9288#0      AGCCCAGTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATA 583
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      GATTTCGGGCAACGGTTCAACGAGATGCGAAAAAAGAAACACCCTAGTCGATTGTTCATT 645
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      GATTTTGGGCAACGGTTCAACGAGATGCGGAAAAAGAAACACC-TAGTCGATTGTTCATT 681
consensus_9288#0      GCGGATATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTC 643
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      CAGCGTAAAATGAAAAATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCA 705
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      CAGCGTAGAT--GAAGATGTTTATCATTGCCACAAGCTTATCCTGTCAGCCGCGAGCCCA 739
consensus_9288#0      GATTTTGATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAG 703
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      GTTTT------------------------------------------------------- 710
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      GTTTTCGAAGCCATGTTCTACGGGGCACTCGCCGAAATGCAGACGGTACAAATAGCGGAT 799
consensus_9288#0      TACATGATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGAAAAAACATCAAACCA 763
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ATCAATTCCAGAGTTTTTGAGCGCATGCTGGATTACATCTACGTTGGAGCAGTCGATTTT 859
consensus_9288#0      AACAACGTGCTGAAAATATTAGACATAGCGTACAGGATGAACTTGGACGATATTATATAC 823
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      GATGGCATACAAAACATTGAGGAGCTGTTGGAACTGTATTATTGCGCAGAAAAGTACATG 919
consensus_9288#0      TCATGTATGTGTGTGTTGAAAACACTTTTTTTCATCNGGAATGAGCTTGAGTAACATCAT 883
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ATTGATAGCTTGCACGAAAAATGCGTCAACTACTTCGGA--------------------- 958
consensus_9288#0      CCTGGAAAGAAGCCATCATCTATCGAAAAATTGTGTCGATCTGATACTGGAAGATAACTT 943
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      TGAAGNTAAGGATAATATAATATGTATGATACGTGCCTGGTGTATTACGGAGTGCGAACA 1003
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      AAATCGGTTAGAAATCAACAGTGATAGTATGAAAACAGTTCTGCAAGATATTGAATTACC 1063
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      CGATACATTGAAAGACACGATTGTTGGATGCAGTTTTACCAACTTTACACCTATTGCAGG 1123
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      CGACAATACAGGTTGGATACCTGTACATCGCATCCATTATAAAGCAGTTAGTCCACTGAT 1183
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      TATCGGGGATGAGATGGACTTCGAAGCCAATATTAGTACGAACCGATTTATCGTGATAAA 1243
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      ATCGTTAAGCTTGAACAGTCGGCTTCTTCCGCAGCTAAAAGTATCGGAAGTGCGACAGGA 1303
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      GACGTACACAGAAAAACTAACTGTTGAAATTTCTTCTAAACATAGCAATGATCGGAAGAA 1363
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      GATCTATCATAAGGAACACCTTATCTGTGATGTTGCATTCAATGATAGCCTGCAACTGAG 1423
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      CTTGACCGAACAAATTGTCTTCTTTCCGGATGTGATATACATTATCCGTATTAAATGGGA 1483
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      CCCAGATAGTCTAGGCTACGAATATCCTCGCTCTATCCTTTCTGCGTACGGCAAGTGCAA 1543
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      GCAGCTAATGGTGAATTTTAGTGAAAATATGTATCTGCAAAATTCCGGCAGCATACTCAA 1603
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      TGGCATAGTTTGCAACCTTTACAAGTGAATTCTCCGCAAAGTAGCTAATCTCCACTAGAT 1663
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      ------------------------------------------------------------
consensus_9288#4      ------------------------------------------------------------
consensus_9288#1      ------------------------------------------------------------
consensus_9288#0      GGTCGCATTTGATACGCTAGTACTGATAATTCAAATCACAAAAATGATTCAAATAAAACT 1723
consensus_9288#3      ------------------------------------------------------------
                                                                                  

consensus_9288#2      -----------------------------------
consensus_9288#4      -----------------------------------
consensus_9288#1      -----------------------------------
consensus_9288#0      GTAAACCAACGCACTTGGTTTTTGAAGCATAAAAA 1758
consensus_9288#3      -----------------------------------