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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9315#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1408 fasta sequence
[CCGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGT--------TCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTGTA-AAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCA-GGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC--TATCGTAAAACAACCACCGTGTTTTCTTTTTCT-TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACG-TTTAAATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCTCCGTTTTGTGATGTGTGGGGGGGTTTGTGTGCGCACGCACACTTCGCGGGGGTTTGTT]
[+] EMBL BM631414 [CCGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAA AACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAA ]
[+] EMBL BM653321 [ ccgGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGT TCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCAGGGGAGCCGCTACAGGCTACACA ]
[+] EMBL BM613838 [ ccgCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACAACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCG ]
[+] EMBL BX629252 [ GCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTGTA AAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCA GGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC TATCGTAAAACAACCACCGTGTTTTCTTTTTCT TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACG TTTAAATTAGAG ]
[+] EMBL BX629143 [ ACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTGTA AAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCA GGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC TATCGTAAAACAACCACCGTGTTTTCTTTTTCT TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACG TTTAAATTAGAG ]
[+] EMBL BM656273 [ ccgCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGGGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGG GGCAGGGAAAGCTCATCAACTATATCGTAAAACAACCACCGTGTTTTCTTTTTTTCTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCACCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGT AAAAACCAGAAACGTTTTAAATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCTCCGTTTTGTGATGTGTGGGGGGGTTTGTGTGCGCACGCACACTTCGCGGGGGTTTGTT]
[+] EMBL BX603822 [ GAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC TATCGTAAAACAACCACCGTGTTTTCTTTTTCT TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCA ]
consensusID : consensus_9315#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 937 fasta sequence
[CCGGAACCGCATCCAGCCGCCAAGCAAGATTCTTCACTTCTTCAACACACCGCCTGGGCTGACCGACGAGCAGCTGATTGCGGCATTCGGCAGCAACGATTGCCACCCGTCGCAAGTGCGCATGTTCCCGCTGAAATCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGCCCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAAGTTCCCGTTCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGCCGCTGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAACTATCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGT]
[+] EMBL BM622111 [CCGGAACCGCATCCAGCCGCCAAGCAAGATTCTTCACTTCTTCAACACACCGCCTGGGCTGACCGACGAGCAGCTGATTGCGGCATTCGGCAGCAACGATTGCCACCCGTCGCAAGTGCGCATGTTCCCGCTGAAATCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGCCCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAAGTTCCCGTTCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGCCGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATG ]
[+] EMBL BM591511 [ ccgTCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGCCCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAAGTTCCCGTTCATAATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGTCGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCG C CCATCACATGTCGCCGTCGCCGCTGCTC ]
[+] EMBL BX628538 [ TCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGCCGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATGCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAACTATCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATT ]
[-] EMBL AGA281833 [ agaAACATGAAGCAGGCCGGCTCGGTCGTGCAGTCGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCG C CCATCACATGCCGCCGCCGTCGCTGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGGGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCG ]
[+] EMBL BM577741 [ CGCCGTCGCCGCTGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGTCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGACGGCAGGGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTTGTGAGTGACAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGT]
consensusID : consensus_9315#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 703 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAATCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCAGGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCGGGCGGCGGCGGTGGCGGCGGCCAGGATGGGCCGCACAACAAGCGGCTCTGTACCGGCCAGGAGATGGGCGAGGTGCCGCTCAATAGTCGGAACAATAATAACAACATCAACGTCACAGACGAACCGCGCCGG]
[+] EMBL BM583890 [CCGCGGACGCGTGGGCGGACGCGTGGGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAATCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCAGGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCGGGCGGCGGCGGTGGCGGCGGCCAGGATGGGCCGCACAACAAGCGGCTCTGTACCGGCCAGGAGATGGGCGAGGTGCCGCTCAATAGTCGGAACAATAATAACAACATCAACGTCACAGACGAACCGCGCCGG]
consensusID : consensus_9315#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 537 fasta sequence
[ATCCCCCGAGGTTAAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGGTGCGTAACCACCAGCAACAGCAGCGTAGCGTGTGTTTTAGAGTAGAAGGAAGCGAAAGAAGCGAAAAAGAAAATAGNAAGCGAAGGGTGGTGGTCTTGCGTTTGTCGGTAGCGTGTCCGGAAGTACCCGGAGATCTTCCATCTCCACACACACACACACACAAACACAAACGCGCGTGGATCGATCACGGGGACCACGAGA]
[+] EMBL AL692286 [ATCCCCCGAGGTTAAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGGTGCGTAACCACCAGCAACAGCAGCGTAGCGTGTGTTTTAGAGTAGAAGGAAGCGAAAGAAGCGAAAAAGAAAATAGNAAGCGAAGGGTGGTGGTCTTGCGTTTGTCGGTAGCGTGTCCGGAAGTACCCGGAGATCTTCCATCTCCACACACACACACACACAAACACAAACGCGCGTGGATCGATCACGGGGACCACGAGA]
consensusID : consensus_9315#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence
[CCGCCCACGCGTCCGTGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGTCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGACGGCAGGGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTTGTGAGTGACAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGCAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCT]
[+] EMBL BM614377 [CCGCCCACGCGTCCGTGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGTCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGACGGCAGGGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTTGTGAGTGACAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGCAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 ------------------------------------------------------------
consensus_9315#1 CCGGAACCGCATCCAGCCGCCAAGCAAGATTCTTCACTTCTTCAACACACCGCCTGGGCT 60
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 ------------------------------------------------------------
consensus_9315#1 GACCGACGAGCAGCTGATTGCGGCATTCGGCAGCAACGATTGCCACCCGTCGCAAGTGCG 120
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 ------------------------------------------------------------
consensus_9315#1 CATGTTCCCGCTGAAATCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGC 180
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ---------------------------------------CCGCGGACGCGTGGGCGGACG 21
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 ------------------------------------------------------------
consensus_9315#1 CCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAA 240
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 CGTGGGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAG 81
consensus_9315#3 --------------------------------------------------ATCCCCCGAG 10
consensus_9315#0 ---CCGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAG 57
consensus_9315#1 GTTCCCGTTCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAA 300
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 TTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACC-GATAC 140
consensus_9315#3 GTT---AAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACC-GATAC 66
consensus_9315#0 TTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACC-GATAC 116
consensus_9315#1 CAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGC 360
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 AGAAGTTGTGCAAGCGAAAG---GAAGGAAGAAGTGTATTCTGAAATCTGTACGTTCTAA 197
consensus_9315#3 AGAAGTTGTGCAAGCGAAAG---GAAGGAAGAAGTGTATTCTGAAAG-TGTGTTTGTTTG 122
consensus_9315#0 AGAAGTTGTGCAAGCGAAAG---GAAGGAAGAAGTGTATTCTGAAAG-TGTGTTTGTTTG 172
consensus_9315#1 CGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGC 420
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 AACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGA 257
consensus_9315#3 GTC--------CGATATCATA-TCGCCCAGCCCTTGCG-------CCCAATTTCACCCCC 166
consensus_9315#0 GTC--------CGATATCATA-TCGCCCAGCCCTTGCG-------CCCAATTTCACCCCC 216
consensus_9315#1 CGCTGCTCCC-CAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGG 479
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 GTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAA 317
consensus_9315#3 ----CAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCG-------TGTGGAGCGC 215
consensus_9315#0 ----CAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCG-------TGTGGAGCGC 265
consensus_9315#1 C--GCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAG 537
consensus_9315#4 ---------------------------------------------CCGCCCACGCGTCCG 15
consensus_9315#2 A---AGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGA-CCAACAAA 373
consensus_9315#3 A---ATTCCACTGGAAG------TCGCGTGGC-CTGTTCGG-TGTGTGTGT-ATTGTGAG 263
consensus_9315#0 A---ATTCCACTGGAAG------TCGCGTGGC-CTGTTCGG-TGTGTGTGT-ATTGTGAG 313
consensus_9315#1 ATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGG 597
consensus_9315#4 ------TGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGG 69
* * * * * *
consensus_9315#2 CAAGGCGCCA-AGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAA 432
consensus_9315#3 TGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCG-AAAAGTGTGCAG 322
consensus_9315#0 TGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCG-AAAAGTGTGCAG 372
consensus_9315#1 CCCCGTATGATATGGCCGTTTCATCCT-CCGGCCAAGCGAGCCAGCG--AGGGGCGGCAG 654
consensus_9315#4 CCCCGTATGATATGGTCGTTTCATCCT-CCGGCCAAGCGAGCCAGCG--AGGGACGGCAG 126
* ** * * * * * * ***
consensus_9315#2 AGGCTACTCTCTCACT-TGGCCAACCCAGGGAGCCGCTACAGGCTACACAACC-CGCATC 490
consensus_9315#3 CAGCCGCC---------------AGCAGGTGCGTAACCACCAGCAACAGCA----GCGTA 363
consensus_9315#0 CAGCCGCCAGCAGTCT-GTACGTTCTAAAACAACAACAAC-AACAACACACTCTCACACC 430
consensus_9315#1 GGAAAGCTCATCAACTATCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTT 714
consensus_9315#4 GGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTT 186
* * *
consensus_9315#2 ACGATCGC---------------GTTCACGCAGCAAC-AGCATCCCCCCGG-TGCCGGTG 533
consensus_9315#3 GCG--TGT---------------GTTTTAG-AGTAGA-AGGAAGCGAAAGA-AGCGAAAA 403
consensus_9315#0 CCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTA 490
consensus_9315#1 GTTGTTGTCCTGTGTCC------GATCCGGCATATTCATTCACCTTCCATAATGATGAAG 768
consensus_9315#4 GTTGTTGTCCTGTGTCC------GATCCGGCATATTCATTCACCTTCCATAATGATGAAG 240
* * * * *
consensus_9315#2 TGATGATCA-TGGCGTCATTCAACGGTGGCAGTGC-CGCGGGCGGCGGCGGTGGCGGCGG 591
consensus_9315#3 AGAAAATAG-NA-----AGCGAAGGGTGGTGGTCT-TGCGTTTGTCGGTAGCG----TGT 452
consensus_9315#0 CAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGC 550
consensus_9315#1 CATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCT-CGCGTTCGTGAGTGGCAGCAACGC 827
consensus_9315#4 CATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCT-CGCGTTTGTGAGTGACAGCAACGC 299
** *
consensus_9315#2 CCAGGATGGGCCGCACAACAAGCGGCTCTGTACCGGCCAGGAGATGGGCGAGGTGCCGCT 651
consensus_9315#3 CCGGAAGTACCCGGAGATCTTCCATCTCCACACACACACACACACAAACACAAA--CGCG 510
consensus_9315#0 AAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCG 610
consensus_9315#1 TCACGACTCCTCGTCTATCCA-TATTGCGCTACAAGTAGTGTGTTAAGCTAGAG-CTGCG 885
consensus_9315#4 TCACGACTCCTCGTCTATCCA-TATTGCGCTACAAGTAGTGTGTTAAGCTAGAG-CTGCG 357
* * * * * *
consensus_9315#2 CA---ATAGTCGGA-ACAATAATAAC-AACATCAACGTCACAGACGAACCGCGCCGG--- 703
consensus_9315#3 CG---TGGATCGATCACGGGGACCAC-GAGA----------------------------- 537
consensus_9315#0 CA---CAGCTTGTAAAAAAAAAGCA--AAGGCTACTCTCTCACTTGGCCAACCCAGGGAG 665
consensus_9315#1 TGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGT-------- 937
consensus_9315#4 TGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGTAGATGAGC 417
* * *
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 CCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCG 725
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 AAAGGCTTGGCAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCT 477
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 GTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTT 785
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 GCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGG 845
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 CAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGG 905
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 TGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCA 965
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 TCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAACTATCGTAAAAC 1025
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 AACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCA 1085
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 TATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGT 1145
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 TCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACA 1205
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 AGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACGTTT 1265
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 AAATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGAAGAAAGAGGGAGAGCAAGAAAAG 1325
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 ------------------------------------------------------------
consensus_9315#3 ------------------------------------------------------------
consensus_9315#0 CGAAAAGCGCCACTATCCGCGCTCTCCGTTTTGTGATGTGTGGGGGGGTTTGTGTGCGCA 1385
consensus_9315#1 ------------------------------------------------------------
consensus_9315#4 ------------------------------------------------------------
consensus_9315#2 -----------------------
consensus_9315#3 -----------------------
consensus_9315#0 CGCACACTTCGCGGGGGTTTGTT 1408
consensus_9315#1 -----------------------
consensus_9315#4 -----------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||