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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9320#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1700 fasta sequence
[CCGGGTGCTGTTAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCGACGAGGCCGGCAACCTGATCTTCAACAAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAGGTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTGTTCGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGTTGCGGGTGCGGGACGCGAAAAAGGCGGGG-GCGTCGGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGCGAGCGGATCGTGAAGC-GGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGCATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAGTCGGAGAACGGCATCCTGGGGTTGGGCCCGTTCCCCCGAGAAGGACCGCGTCGATCCCGGTCTGATCAATGCGGGCAAGGAAACGGTGACGGTACTGCCGGGTGCGTCCTACTTCTCGTCCGACGACAGCTTTGCGATGATTCGCGGCGGCCACATCGACATTACGGTGCTCGGTGCGATGGAGGTGTCGCAGTACGGTGATCTGGCCAACTGGATGATTCCCGGTAAGCTGGTGAAGGGTATGGGAGGCGCAATGGATCTTGTGGCTGCCCCCGGCACCAAAGTGATCGTGACGATGGAACACAACGCCAAGGACGGTTCACACAAGATTCTGTCCAACTGCAACCTGCCCGTGACGGGCCGGAACTGCGTCGACATGATCATCACCGAGAAGGCCGTGTTCAACGTGGACAAGGAGCGGGGCCTGACGCTGATGGAGCTGGCGGAGGACTGCACCGTGGAGGAGGTCATTACCAGCACCGGTTGCGAGTTTTCCGTTTCACCCGACCTGAAG]
[+] EMBL BM628255 [CCGGGTGCTGTTAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCGGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGAAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAA ]
[+] EMBL BM619732 [ ccgAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCTGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATC ]
[+] EMBL BM598623 [ ccgATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTG ]
[+] EMBL BM613548 [ CCG GCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTGCACGAAGGCGGCTCGCCGATCAAGTACGGGCCGGGCGGGACGATCGAGATCGCGAGCGAACCGCGCCCG ]
[+] EMBL BM654000 [ ccgCACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAG ]
[+] EMBL BM636374 [ ccGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCGACGAGGCCGGCAACCTGATCTTCAACAAGTCGGCGCG ]
[+] EMBL BM640153 [ ccgGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCGACGAGGCCGGCAACCTGATCTTCAACAAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAGGTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTGTTCGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGTTGCGGGTGCGGGACGCGAAAAAGGCGGGG GCGTCGGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGCGAGCGCATCGTGAAGCGGGGTGGC ]
[+] EMBL BM619795 [ ccGCTCGCCGATCAAGTACGGCCCGGGCGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTAAAGGCGCACGTGGCCGACGAAGCCGGCAACCTGATCTTCAACAAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAGGTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTGTTTGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGCTGCGGGTGCGGGACGCGAAAAAGGCGGGC GCGTCGGTGGTATCTTCCACGCCGGCCGCCAAGATGCGCGAGCGGATCGTGAAGC GGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGCATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAGTCGGAGAACGGCATCCTGGGGTTGGGCCCGTTCCCCCGAGAAGGACCGCGTCGATCCCGG ]
[+] EMBL BM583994 [ cCGGGGCGCGTCAGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGCGAGCGGATCGTGAAGC GGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGCATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAGTCGGAGAACGGCATCCTGGGGTTGGGTCCGTT CCCCGAGAAGGACCGCGTCGATCCGGATCTGATCAATGCGGGCAAGGAAACGGTGACGGTACTGCCGGGTGCGTCCTACTTCTCGTCCGACGACAGCTTTGCGATGATTCGCGGCGGCCACATCGACATTACGGTGCTCGGTGCGATGGAGGTGTCGCAGTACGGTGATCTGGCCAACTGGATGATTCCCGGTAAGCTGGTGAAGGGTATGGGAGGCGCAATGGATCTTGTGGCTGCCCCCGGCACCAAAGTGATCGTGACGATGGAACACAACGCCAAGGACGGTTCACACAAGATTCTGTCCAACTGCAACCTGCCCGTGACGGGCCGGAACTGCGTCGACATGATCATCACCGAGAAGGCCGTGTTCAACGTGGACAAGGAGCGGGGCCTGACGCTGATGGAGCTGGCGGAGGACTGCACCGTGGAGGAGGTCATTACCAGCACCGGTTGCGAGTTTTCCGTTTCACCCGACCTGAAG]
consensusID : consensus_9320#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 690 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCC-GGGCC-GGGGGGT-GCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGCGGGCACGATCGAGATCGCGAGCGAA]
[+] EMBL BM603378 [CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCC GGGCC GGGGGGT GCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGCGGGCACGATCGAGATCGCGAGCGAA]
[+] EMBL BM630897 [ CCGCCCACGCGTCCG GCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTG ]
[+] EMBL BM605024 [ ccgGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGGCCGGGGGGGTGGCCGGCGT ]
consensusID : consensus_9320#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCCGGGGGGTGCCGGCGTT]
[+] EMBL BM631000 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCCGGGGGGTGCCGGCGTT]
consensusID : consensus_9320#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 398 fasta sequence
[GATTCGGCACGAGGATCNATGCCGGTGTGGACACATTCGGGCTCGGGGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCNATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCCGACGAN]
[+] EMBL BX619182 [GATTCGGCACGAGGATCNATGCCGGTGTGGACACATTCGGGCTCGGGGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCNATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCCGACGAN]
consensusID : consensus_9320#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 381 fasta sequence
[GCCCCGAGTGGCTCGCGTACATTAGTTTAACTCGCGCAAGCACCTGTTACGTCATTGGTGGAATAAATAGAACGTTGCCTCCGTAAATACAACTGTAAACGTTTTGCTACAAAGTAGCAAAACGATCGGCAAACGCAAATGACGTTGCATGGTTTCATATAGATGCCGAGAATGTGACGCCAAACCAAAGCAAGGGGTAACATCCCGATCAGATCGACCCGTCGTGAACCGGTACTGGCCTGCGGTATTCGACGCAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGGTGGTCGGGGGTTCGGGCTGTGCGGTATTCCGGAGAACCTGATTGCGGGCTGGTAC]
[+] EMBL AL694553 [GCCCCGAGTGGCTCGCGTACATTAGTTTAACTCGCGCAAGCACCTGTTACGTCATTGGTGGAATAAATAGAACGTTGCCTCCGTAAATACAACTGTAAACGTTTTGCTACAAAGTAGCAAAACGATCGGCAAACGCAAATGACGTTGCATGGTTTCATATAGATGCCGAGAATGTGACGCCAAACCAAAGCAAGGGGTAACATCCCGATCAGATCGACCCGTCGTGAACCGGTACTGGCCTGCGGTATTCGACGCAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGGTGGTCGGGGGTTCGGGCTGTGCGGTATTCCGGAGAACCTGATTGCGGGCTGGTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9320#0 CCGGGTGCTGTTAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGC 60
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ---------------------CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCCGTGCGC 39
consensus_9320#2 -----------------------------------CCGCCCACGCGTCCGCCCACGCGTC 25
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 TAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCTTTCGGGAAAT 120
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 TAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAAT 99
consensus_9320#2 CGCCCACGCGTCCGCCCACGCGTCCGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAAT 85
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 TGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGT 180
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 TGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGT 159
consensus_9320#2 TGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGT 145
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 GCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACT 240
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 GCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACT 219
consensus_9320#2 GCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACT 205
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 GGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGC 300
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 GGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGC 279
consensus_9320#2 GGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGC 265
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 GATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTAT 360
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 GATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCAT 339
consensus_9320#2 GATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTAT 325
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 CCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTC 420
consensus_9320#3 -------------------------------------------GAT-TCGGCACGAGG-- 14
consensus_9320#1 CCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTC 399
consensus_9320#2 CCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTC 385
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 CAACAATGCCGGTGTGGACACATTCG---GGCTCGGGCTGCTGCTGAAGGAGAAGCTGAT 477
consensus_9320#3 -ATCNATGCCGGTGTGGACACATTCG---GGCTCGGG--GCTGCTGAAGGAGAAGCTGAT 68
consensus_9320#1 CAACAATGCCGGTGTGGACACATTCG---GGCTCGGGCTGCTGCTGAAGGAGAAGCTGAT 456
consensus_9320#2 CAACAATGCCGGTGTGGACACATTCG---GGCTCGGGCTGCTGCTGAAGGAGAAGCTGAT 442
consensus_9320#4 -GCCCCGAGTGGCTCGCGTACATTAGTTTAACTCGCGCAAGCACCTGTTACGTCATTGGT 59
* ** * ***** * **** * * * ** *
consensus_9320#0 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 536
consensus_9320#3 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 127
consensus_9320#1 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 515
consensus_9320#2 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 501
consensus_9320#4 GGAATAAATAGAACGTTGCCTCCGTAAATACAACTGTAAACGTTTTGCTACAAAGTA-GC 118
* ** ** ** * * *** * ** * * ** ** * *
consensus_9320#0 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 591
consensus_9320#3 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 182
consensus_9320#1 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 570
consensus_9320#2 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 556
consensus_9320#4 AAAACGATCGGCAAACGCAAATGACGTTGCATGGTTTCATATAGATGCCGAGAATGTG-A 177
*** * * * * ***** *** ** ** * ****** * *
consensus_9320#0 GGCC-GGGGG-TGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTG 649
consensus_9320#3 GGCC-GGGGG-TGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTG 240
consensus_9320#1 GGCC-GGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTG 629
consensus_9320#2 GGCCCGGGGGGTGCCGGCGTT--------------------------------------- 577
consensus_9320#4 CGCCAAACCAAAGCAAGGGGTAACATCCCGATCAGATCGACCCGTCGTGAACCGGTACTG 237
*** ** * * *
consensus_9320#0 CACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGG-ACGATCGAGATCGCGAGCGA 708
consensus_9320#3 CACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGG-ACGATCGAGATCGCGAGCGA 299
consensus_9320#1 CACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGCGGGCACGATCGAGATCGCGAGCGA 689
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 GCCTGCGGTA-TTCGACGCAAAGAAGCGCTCCAAA-----ATCTACGCCAGCGCGGACGA 291
consensus_9320#0 ACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCA-TGGAGGAAGCGATCACGG 767
consensus_9320#3 ACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCNATGGAGGAAGCGATCACGG 359
consensus_9320#1 A----------------------------------------------------------- 690
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 AGCGATCGCAG---ACATTCCCGACGGTGCGAAACTGGTGGTCGGGGGTTCGGGCTGTGC 348
consensus_9320#0 GCGACTTTGCGCTGGTGAAGGCGCACGTGGCC-GACGAGGCCGGCAACCTGATCTTCAAC 826
consensus_9320#3 GCGACTTTGCGCTGGTGAAGGCGCACGTGGCCCGACGAN--------------------- 398
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 GGTATT-----CCGGAGAACCTGATTGCGGGCTGGTAC---------------------- 381
consensus_9320#0 AAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAG 886
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 GTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTG 946
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 TTCGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGTTGCGGGTG 1006
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 CGGGACGCGAAAAAGGCGGGGGCGTCGGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGC 1066
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 GAGCGGATCGTGAAGCGGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGC 1126
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 ATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAG 1186
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 TCGGAGAACGGCATCCTGGGGTTGGGCCCGTTCCCCCGAGAAGGACCGCGTCGATCCCGG 1246
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 TCTGATCAATGCGGGCAAGGAAACGGTGACGGTACTGCCGGGTGCGTCCTACTTCTCGTC 1306
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 CGACGACAGCTTTGCGATGATTCGCGGCGGCCACATCGACATTACGGTGCTCGGTGCGAT 1366
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 GGAGGTGTCGCAGTACGGTGATCTGGCCAACTGGATGATTCCCGGTAAGCTGGTGAAGGG 1426
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 TATGGGAGGCGCAATGGATCTTGTGGCTGCCCCCGGCACCAAAGTGATCGTGACGATGGA 1486
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 ACACAACGCCAAGGACGGTTCACACAAGATTCTGTCCAACTGCAACCTGCCCGTGACGGG 1546
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 CCGGAACTGCGTCGACATGATCATCACCGAGAAGGCCGTGTTCAACGTGGACAAGGAGCG 1606
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 GGGCCTGACGCTGATGGAGCTGGCGGAGGACTGCACCGTGGAGGAGGTCATTACCAGCAC 1666
consensus_9320#3 ------------------------------------------------------------
consensus_9320#1 ------------------------------------------------------------
consensus_9320#2 ------------------------------------------------------------
consensus_9320#4 ------------------------------------------------------------
consensus_9320#0 CGGTTGCGAGTTTTCCGTTTCACCCGACCTGAAG 1700
consensus_9320#3 ----------------------------------
consensus_9320#1 ----------------------------------
consensus_9320#2 ----------------------------------
consensus_9320#4 ----------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||