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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9344#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1746 fasta sequence
[TTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGCGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGTTCATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCGGGCGATTCGGGCACGCTACCACCCGTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGATGGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCAAAACAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACGGGTGCACCCGGCTCGAGATTGGCGTGCAGTCGGTGTACGAGGACGTGGCGCGGGACACCAACCGCGGTCACACGGTGAAGGCCACGTGCGAAAGCTTCCAGATGTCGAAGGACGCCGGCTTCAAGGTGGTTTCACACATGATGCCCGACCTGCCGAACGTGGACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGGATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCTTTTTGGGCCTTTACGAGCTGTGGAAAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATATTGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT-GGC-CCTGGCGCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGATACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAAATAAAGTGTGGCCATTAAAAAA]
[+] EMBL CNS08FPN [TTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGCGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGTTCATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCGGGCGATTCGGGCACGCTACCACCCGTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGATGGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCAAAACAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACGGGTGCACCCGGCTCGAGATTGGCGTGCAGTCGGTGTACGAGGACGTGGCGCGGGACACCAACCGCGGTCACACGGTGAAGGCCACGTGCGAAAGCTTCCAGATGTCGAAGGACGCCGGCTTCAAGGTGGTTTCACACATGATGCCCGACCTGCCGAACGTGGACATCGAGCGGGATATTGAGCAGTTTATAGAGT ]
[-] EMBL CNS08FPO [ AGCTTCCAGATGTCGAAGGACGCCGGCTTCAAGGTGGTTTCAAACATGATGCCCGACCTGCCGAACGTGGACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGGATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCTTTTTGGGCCTTTACGAGCTGTGGAAAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATATTGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT GGC CCTGGCGCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGATACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAA ]
[-] EMBL CNS08FR0 [ GCTTCAAGGT GTTTCACACATGATGCCCGACCTGCCGAACGTGAACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGGATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCAAAAAAGGCCTTTACGAGCTGTGGAAAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATATTGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCATGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCTGGGCGCCTGGCGCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAAATAAAGTGTGGCCATTAAAAAA]
consensusID : consensus_9344#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1377 fasta sequence
[CGGGTAATGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG-CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT-GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC-GA-TGC-G-G-GCG-ATTCGGGCACGCTACCACCC-GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT-GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT-GGCCCTGGCG-CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA-CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA-CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT-GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCA-GACACAAATAAAATGTGCTA]
[+] EMBL CNS08PSM [CGGGTAATGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAGTCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCTTCATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCTGATTGCTG G GCG ATTCGGGCACGCTACCACCCGGTTCCTGCAGACCCGG ]
[+] EMBL CNS08EPB [ TGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGA CTGGGCCCTGGCG CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTA ]
[+] EMBL BM620657 [ ccgGATTGCCGCATATTGTGCACTAAATTTACTTTAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGGATGCTGATTGTGGTAGGTGAAATCATCCAGGAGCTGCTGAAAGCGCACCACGAGGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTTGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCGGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAACCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCAT ]
[+] EMBL BM593431 [ ccgGCCGCATATTGTGCACTAAATTTACTTTAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGGATGCTGATTGTGGTAGGTGAAATCATCCAGGAGCTGCTGAAAGCGCACCACGAGGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTTGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCGGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAACCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGT ]
[+] EMBL BM625835 [ ccgGCCGCATATTGTGCACTAAATTTACTTATAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGGATGCTGATTGTGGTAGGTGAAATCATCCAGGAGCTGCTGAAAGCGCACCACGAAGGCAAGGACGTGAATCTGAATCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACTTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGAGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGATGGGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATACGCAACCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCG ]
[+] EMBL CNS08GQ8 [ CACTAAATTTACTCAAAAAATGACGAAAAACAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGTGGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGCCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGA CTGGGCCCTGGCG CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAG ]
[+] EMBL CNS08FQZ [ TGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC GCGCGCGCATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGG ]
[-] EMBL CNS08EPC [ TGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATAACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT GGCCCTGGCG CGCATGAAGGATCTCGGCACGAACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAGGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCA GACACAAATAAAA ]
[-] EMBL CNS08GQ9 [ CACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATAACTGCCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT GGCCCTGGCG CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAAT ]
[-] EMBL CNS09MRZ [ gcCGAGCT GGCCCTGGCGCCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCA GGCAC ]
[-] EMBL CNS094IQ [ GGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAAGCGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATAGGACCGTACATGTCTAAGATGTTG ]
[-] EMBL CNS08PSN [ gacCCAGATCAGGTTGAGCTGATTCGGCGGGA AACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCAGCGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAAATAAAGTGTGCTA]
consensusID : consensus_9344#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 399 fasta sequence
[AATCCCCAGGTTAATGTGTGTTGCGTTATTTCAACACACCGCTGTCCTGCGACATCTAACATGTACGGGCGAACATTTGCGTGTATTTGTCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGAACTCGATGCGGGCGATTCGGTGCGACGCTACACCCGTTCCTGCAGACCCGGCACCGNNGTTGAGCAGCTTGAAGCAGCTGGTGCNCACTCNNGTCGACAAAGTGGAGTTTATCTGTGATTGGGANGGGACGGTTCACTNTTTTCTTGCCCNGGAANGGAGGTAATCCACCGANANCTTCNCAATATACGGAAACCTTNTTGATCGAAAGCCAACCTGTTCCGGGGCCGATAACAANACGTCCAATTGTT]
[+] EMBL AL933557 [AATCCCCAGGTTAATGTGTGTTGCGTTATTTCAACACACCGCTGTCCTGCGACATCTAACATGTACGGGCGAACATTTGCGTGTATTTGTCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGAACTCGATGCGGGCGATTCGGTGCGACGCTACACCCGTTCCTGCAGACCCGGCACCGNNGTTGAGCAGCTTGAAGCAGCTGGTGCNCACTCNNGTCGACAAAGTGGAGTTTATCTGTGATTGGGANGGGACGGTTCACTNTTTTCTTGCCCNGGAANGGAGGTAATCCACCGANANCTTCNCAATATACGGAAACCTTNTTGATCGAAAGCCAACCTGTTCCGGGGCCGATAACAANACGTCCAATTGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9344#0 ----------------TTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAA 44
consensus_9344#1 CGGGTAATGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAA 60
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 AATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGT 104
consensus_9344#1 AATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGT 120
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 GCGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATC 164
consensus_9344#1 G-GTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATC 179
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGG 224
consensus_9344#1 TGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGG 239
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCG 284
consensus_9344#1 TCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCG 299
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 CGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACC 344
consensus_9344#1 CGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACC 359
consensus_9344#2 -------------------AATCCCCAGGTTAATGTGTGTTGCGTTATTTCAAC-ACACC 40
* * * ** ** * * * *** *****
consensus_9344#0 GCTGTCC-GC-ACATC-AACATG-ACGGGTT--CATTTGCGTGTATTGTCCCGGCGGTCC 398
consensus_9344#1 GCTGTCC-GC-ACATC-AACATG-ACGGGCAA-CATTTGCGTGTATTGTCCCGGCGGTCC 414
consensus_9344#2 GCTGTCCTGCGACATCTAACATGTACGGGCGAACATTTGCGTGTATTTGTCCGGCGGTCC 100
******* ** ***** ****** ***** ************** **********
consensus_9344#0 GGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCG 458
consensus_9344#1 GGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCG 474
consensus_9344#2 GGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGAACTCGATGCG 160
************************************************** *********
consensus_9344#0 GGCGATTCGG-GC-ACGCTACCACCCGTTCCTGCAGACCCGGCACCGGG-TGGAGCAGCT 515
consensus_9344#1 GGCGATTCGG-GC-ACGCTACCACCCGTTCCTGCAGACCCGGCACCGGG-TGGAGCAGCT 531
consensus_9344#2 GGCGATTCGGTGCGACGCTAC-ACCCGTTCCTGCAGACCCGGCACCGNNGTTGAGCAGCT 219
********** ** ******* ************************* * ********
consensus_9344#0 -GAAGCAGCTGGGCCAC---TCGGTCGACAAGGTGGAGTTTAT-TGTGAT--GGGAGGGA 568
consensus_9344#1 -GAAGCAGCTGGGCCAC---TCGGTCGACAAGGTGGAGTTTAT-TGTGAT--GGGAGGGA 584
consensus_9344#2 TGAAGCAGCTGGTGCNCACTCNNGTCGACAAAGTGGAGTTTATCTGTGATTGGGANGGGA 279
*********** * * ******** *********** ****** ** ****
consensus_9344#0 CGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCAC 628
consensus_9344#1 CGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCAC 644
consensus_9344#2 CGGTTCACTNTTTTCTTGCCCNGGAANGGAGGTAATCCAC-CGANANCTTCNCAATATAC 338
** * * * * * * * * * ** ** * ** * * * **
consensus_9344#0 TGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCAAA 688
consensus_9344#1 TGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACA 704
consensus_9344#2 GG-------AAACCTTNTTGATCGAAAGCCAACCTGTTCCGGGGCCGATAACAANACGT- 390
* * *** * ** * ** * ** * ** ** * *
consensus_9344#0 ACAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGT 748
consensus_9344#1 CCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGT 764
consensus_9344#2 CCAATTGTT--------------------------------------------------- 399
*** **
consensus_9344#0 CCGATTTGCTGTCGTACGGGTGCACCCGGCTCGAGATTGGCGTGCAGTCGGTGTACGAGG 808
consensus_9344#1 CCGATTTGCTGTCGTAC------------------------------------------- 781
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 ACGTGGCGCGGGACACCAACCGCGGTCACACGGTGAAGGCCACGTGCGAAAGCTTCCAGA 868
consensus_9344#1 ------------------------------------------------------------
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TGTCGAAGGACGCCGGCTTCAAGGTGGTTTCACACATGATGCCCGACCTGCCGAACGTGG 928
consensus_9344#1 ------------------------------------------------------------
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 ACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGG 988
consensus_9344#1 ------------------------------------------------------------
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 ATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCTTTTTGGGCCTTTACGAGCTGTGGA 1048
consensus_9344#1 ------------------------------------------------------------
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 AAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATAT 1108
consensus_9344#1 ------------------------------------------------------------
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCGTGACATCCCGATGCCGC 1168
consensus_9344#1 --------------------------------CGTGTACAGCGTGACATCCCGATGCCGC 809
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCTGGCCCTGGCGCGCATGAAGG 1228
consensus_9344#1 TCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCTGGCCCTGGCGCGCATGAAGG 869
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 ATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACA 1288
consensus_9344#1 ATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACA 929
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 ACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGT 1348
consensus_9344#1 ACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGT 989
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 GGGATACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGT 1408
consensus_9344#1 GGGAAACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGT 1049
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGC 1468
consensus_9344#1 TGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGC 1109
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 GGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCC 1528
consensus_9344#1 GGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCC 1169
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 AGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGC 1588
consensus_9344#1 AGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGC 1229
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 ACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGA 1648
consensus_9344#1 ACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGA 1289
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAA 1708
consensus_9344#1 TTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAA 1349
consensus_9344#2 ------------------------------------------------------------
consensus_9344#0 TAAATTCAGGACACAAATAAAGTGTGGCCATTAAAAAA 1746
consensus_9344#1 TAAATTCAG-ACACAAATAAAATGTG-CTA-------- 1377
consensus_9344#2 --------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||