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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9347#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1579 fasta sequence
[TTTTTTTTTAAAGTTGTAACACATGGGTCGCTTTATTTCAAACGGCACTTGCACACACAATGTGGTATAATACTTAGGTATAAAGAATGTACAAAATCATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTTCTCGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA-G-TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC-AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA-TC-GCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGC-GTGTGTTAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCACCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCCAGCAGCGTGGTGCCGGACGCGTGGGCGGACGCGTGGGCGG]
[+] EMBL CNS08QB3 [TTTTTTTTTAAAGTTGTAACACATGGGTCGCTTTATTTCAAACGGCACTTGCACACACAATGTGGTATAATACTTAGGTATAAAGAATGTACAAAATCATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTTCTCGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCT CATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA G TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATAAATTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC ]
[+] EMBL CNS08UTC [ TTATTTCACACGGCACTCGCACACACAATGTGGTATAATACTTAGGTATAAAGAATGTACAAAAT ATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTTCTCGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATATAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA G TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGC ]
[-] EMBL CNS08QB2 [ TCGATG TTGCGC TTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGGAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGTTTTTTACGGTAA GTTCTG TAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATTC GCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGC GTTTTTTAATccagta ]
[-] EMBL BX601922 [ GATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA G TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAA ]
[-] EMBL CNS08UTB [ TGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATG TCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAAGG TCTG TAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTATTACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTACTC GCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGT ]
[-] EMBL AGA284721 [ AGGTACGAACGGTAA G TCTGCTAACG CACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGTTGGGCACAATTCAATCCTGACCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTGTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGCCGTTTGGTGGCGTGTGGTGGGTTTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAAAATTGACCGAAATCCAATAGGAGAAGAAGCTACCCGAGTCTGATCATATTCCAACAGTAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCTCTCTCCTTTTGTGTAGGACTTGGGGATTTGATGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGG ]
[-] EMBL BM645275 [ TTTGACGGGCACAATGCAATCCCGTTCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTGTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACGGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGCGGACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAATACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTTAATAATGTAGCAGcgg ]
[-] EMBL AL692675 [ tgaCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTGTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGCCGTTTGGTGGCGTGT GTGGGTTTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAAAATTGACCGAAATCCAATAGGAGAAGAAGCTACCCGAGTCTGATCATATTCCAACAGTAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCTCTCTCCTTTTGTGTAGGACTTGGGGATTTGATGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGCAAGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGCGCAGCCTTTTCGAGCCTTaacctc ]
[-] EMBL BX622891 [ TTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAAAATTGACCGAAATCCAATAGGAGAAGAAGCTACCCGAGTCTGATCATATTCCAACAGTAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCTCTCTCCTTTTGTGTAGGACTTGGGGATTTGATGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGAC ]
[-] EMBL BM600938 [ CAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAATACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGAGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTTAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCACCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCCAGCAGCGTGGTGCCGGACGCGTGGGCGGACGCGTGGGCGG]
consensusID : consensus_9347#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 854 fasta sequence
[ATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGNAGACACACGCTCACTACGANCAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAAGAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGAGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGGACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCCCGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATAAACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTGAAATCGTTTCTA-TTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCAAGGCCGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCGAGCAGCG]
[-] EMBL BX622004 [ATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGNAGACACACGCTCACTACGANCAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAAGAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGAGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGGACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCCCGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATAAACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTGAAATCGTTTCTA TTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCAAGGCCGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCGAGCAGCG]
[-] EMBL BX626196 [ AGCCTGTGTGNCCGGGTGCGGNGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAAGAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGAGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGGACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCCCGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATAAACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTGAAATCGTTTCTATTTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTT ]
consensusID : consensus_9347#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence
[GCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCTTAATGAGCAGTAAGGGCAGTTCCGGCAGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATTCTGAGCTTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACCTAGAGGCAGAAATGGGAAGAGAAAACAGAAGAACAAAATGATTAGTAAGGAAAGTACTTGAAAAGGATAGCACTTGAC]
[-] EMBL BX602924 [GCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCTTAATGAGCAGTAAGGGCAGTTCCGGCAGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATTCTGAGCTTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACCTAGAGGCAGAAATGGGAAGAGAAAACAGAAGAACAAAATGATTAGTAAGGAAAGTACTTGAAAAGGATAGCACTTGAC]
consensusID : consensus_9347#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 363 fasta sequence
[TTTTTTTTAAAAGTTGTATAAAATGGTCGCTTTATTTAAAACGGCACTTGCACACACAATG-TGGTATAATACTTAGGTATAAAGAATGTACAAAATATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTACTCGCGTTCGCGTTGC-T-GTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGAGACACACACAACACTGGTTATCCTGCATCCTCCTGCAATCAAAGCACCGGGATATGTTCTAACCAACCCATTGCGGATTACAATTGCGGG]
[+] EMBL AGA283427 [TTTTTTTTAAAAGTTGTATAAAATGGTCGCTTTATTTAAAACGGCACTTGCACACACAATG TGGTATAATACTTAGGTATAAAGAATGTACAAAATATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTACTCGCGTTCGCGTTGC T GTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGAGACACACACAACACTGGTTATCCTGCATCCTCCTGCAATCAAAGCACCGGGATATGTTCTAACCAACCCATTGCGGATTACAATTGCGGG]
[+] EMBL CNS09E25 [ CGGCACATGCACACACAATGATGGTATAATACTTAGGTATAAAGAATGTACAAAATATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAATTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTACTCGCGTTCGCGTTGCATAGTCGATGTTTGCGCTTTCTAATGTAAAAATTAATCAGACAATGTGCTTG ]
consensusID : consensus_9347#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 90 fasta sequence
[GTTTGCTGCTCGTCTTCAGTCCGGTCCTTTTTGTTTTTTGCGTGTGTCTGCCGGAGCTGCCCTTACTGCTCATTAGGCGCCTGCCTTACA]
[+] EMBL CNS09E24 [GTTTGCTGCTCGTCTTCAGTCCGGTCCTTTTTGTTTTTTGCGTGTGTCTGCCGGAGCTGCCCTTACTGCTCATTAGGCGCCTGCCTTACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9347#0 -----------------------------------------------------TTTTTTT 7
consensus_9347#3 -----------------------------------------------------TTTTTTT 7
consensus_9347#1 -------------------ATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATG 41
consensus_9347#2 GCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATG 60
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TTAAAGTTGTAACACATGGGTCGCTTTATTTCAAACGGCACTTGCACACACAATGTGGTA 67
consensus_9347#3 TAAAAGTTGTATAAAATGG-TCGCTTTATTTAAAACGGCACTTGCACACACAATGTGGTA 66
consensus_9347#1 CAGGCGCC-TAATGAGCAGTAAGGGCAGCTCCGGNAGACACACGCTCACTACGANCAGGA 100
consensus_9347#2 CAGGCGCT-TAATGAGCAGTAAGGGCAGTTCCGGCAGACACACGCTCACTACGAACAGGA 119
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TAATACTTAGGTATAAAGAATGTACAAAATCATGGTGTCAAAATATCATCATCGTTCGTT 127
consensus_9347#3 TAATACTTAGGTATAAAGAATGTACAAAAT-ATGGTGTCAAAATATCATCATCGTTCGTT 125
consensus_9347#1 CCGGGCTGAAG-ACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCA 159
consensus_9347#2 CCGGGCTGAAG-ACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCA 178
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCA-CTTCTTCTT---CT 183
consensus_9347#3 TGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCA-CTTCTTCTA---CT 181
consensus_9347#1 CCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTT 219
consensus_9347#2 CCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTT 238
consensus_9347#4 ----------------------GTTTGCTGCTCGTCTTCAGTCCGGTCCTTTTTGTTTTT 38
* * ** * * ** *
consensus_9347#0 CGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTG 243
consensus_9347#3 CGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTG 241
consensus_9347#1 TGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAA----ATAATGTAGCAGAAGGTGAG 275
consensus_9347#2 TGATTCTGAGCTTGTGTGGCCGGGTGCGGTGTGTAA----ATAATGTAGCAGAAGGTGAG 294
consensus_9347#4 TGCGTGTGT-CTGCCGGAGCTGCCCTTACTGCTCAT--TAGGCGCCTGCCTTACA----- 90
* * * * * * * * *
consensus_9347#0 -CTTGCACGGTGATGCCGAGAGCGCACAGGGGA--CACACACAACACTGGTATGTATCGT 300
consensus_9347#3 -CTTGCACGGTGATGCCGAGAGCGCACAGGGGAGACACACACAACACTGGT------TAT 294
consensus_9347#1 ACGTACGTTGGAAAGGTTAATAAGAATATCGCG-ACACTTTTCAAGCTAGCTCTATGCCG 334
consensus_9347#2 ACGTACGTTGGAAAGGTTAATAATAATATCGCG-ACACTTTTCAAGCTAGCTCTATGCCG 353
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCAC 360
consensus_9347#3 CCTGCAT-------------------CCTCCTGCAATCAAAGCACCGGGATATGTTCTAA 335
consensus_9347#1 CCGGGATTGAAGCGAAGAAA------ACTGAGACAGGATATGAAGTAGAATTTTAATCAC 388
consensus_9347#2 CCGGGATTGAAGCGAAGAAA------ACTGGGACAGGATATGAAGTAGAATTTTAATCAC 407
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTG 420
consensus_9347#3 CCAACCCATTGCGGATTACAATTGCGGG-------------------------------- 363
consensus_9347#1 TCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGG 448
consensus_9347#2 TCTCCCCTTGTAGAACTAGGAACGCCACCTAGAGGCAGA---AATGGGAAGAGAAAACAG 464
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAG 480
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCC 508
consensus_9347#2 A--AGAACAAAATGATTAGTAAGGAAAGTACT---TGAAAAGGATAGCACTTGAC----- 514
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 GGACGACAGGTACGTACGGTAAGTCTGCTAACGCACACACACACATTGTGACAGATCGAC 540
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 CGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATA 568
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 ATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCC 600
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 AACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTG 628
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 AAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTC 660
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 AAATCGTTTCTATTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTC 688
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCC 720
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 TGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCG 748
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAA 780
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 TATTGGATGACGGTTCGATTACACCACTTCCCAAGGCCGGCTGGCTGGCTGGCTGGCTGG 808
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 AGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTA 840
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 CAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCGAGCAGCG-------------- 854
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCT 900
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAA 960
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGCAGAC 1020
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 ACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGA 1080
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCG 1140
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGTGTGTTAATAATG 1200
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGC 1260
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TAGCTCTATGCCACCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTT 1320
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TAATCACTCTCCCCTTGTAGAACTAGGAACGCCACAGCTAGCAAAATGCACGCCTCTGCT 1380
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATT 1440
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 GGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCTGG 1500
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 CAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCCAGCAGCGTGGTGCCGGACGCG 1560
consensus_9347#3 ------------------------------------------------------------
consensus_9347#1 ------------------------------------------------------------
consensus_9347#2 ------------------------------------------------------------
consensus_9347#4 ------------------------------------------------------------
consensus_9347#0 TGGGCGGACGCGTGGGCGG 1579
consensus_9347#3 -------------------
consensus_9347#1 -------------------
consensus_9347#2 -------------------
consensus_9347#4 -------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||