cluster # 9350

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9350 cluster # 9350 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9350#0 length = 1738 sequences # 12

consensus_9350#1 length = 904 sequences # 4

consensusID : consensus_9350#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1738
fasta sequence

                              [CCCTGTTGTTGAAGGATGAAAAAGTGCTGCAGGAAGTGTTAAACCAAAGTTTCGACTGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGATGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCAAGGAGGCGGACGGCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGTTTTAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGGGCGAAAAAAAAGAACCGAAACCGATCGTACCGATCGTACCGCAGCAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAAGAGAAGAAGCTAACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGGCAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGA-GGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAA-CCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCGCCGAGCCGTGATTCGAGCGAGTACCAGAACGGCTTCCCATCGCTGAGAGTGTCGGCCGCCGTGTCGAGACCCACCGCGCTGAGACATTCGCGCAACTTCAGACCGTACTGTGACCATTTCATCTCGGACGAATTGCGCGAACTGGCGGA-GGATGTGGTGGTGAAGCTGTTC-AGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCTGCT-G-GAG-TGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTGCGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC-TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCG-AAAGCTA-CCGCACCTT-GATGGTGGACGGTGCCATT-CCCTGTTGAGTGCGACACGGCAGGCATGCCCGGTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA-CTTTCGGCAAGCATGCCGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACATATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTCGTCCCCTTTCCCCGTACGCATTCTAAATTCCAACCCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACGAAAGGAAACGCGGCCCCACGCTG]

[+] EMBL CNS08XR9             [CCCTGTTGTTGAAGGATGAAAAAGTGCTGCAGGAAGTGTTAAACCAAAGTTTCGACTGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGATGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCAAGGAGGCGGACGGCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGTTTTAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGGGCGAAAAAAAAGAACCGAAACCGATCGTACCGATCGTACCGCAGCAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAAGAGAAGAAGCTAACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGGCAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGA GGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAACCCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCGCCGAGCCGTGATTCGAGCGAGTACCAGAACGGCTTCCCATCGCTGAGAGTGTCGGCCGCCGTGTCGAGACCCACCGCGCTGAGACATTCGCGCAACTTCAGACCGTACTGTGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08FC1             [          GAAGGATGAAAAAGTGCTGCAGGAAGTGTTAAACCAAAGTTTCGACTGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGATGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCAAGGAGGCGGAGGGCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGTTGAAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGGGCGAGCGGATGGAACCGAAACCGATCGTACCGATCGTACCGCAGCAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAAGAGAAGAAGCTAACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGGCAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGA GGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAA CCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCGCCGAGCCGTGATTCGAGCGAGTACCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08NFA             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGGCAGCAAAGCGCTGGCAATGCGGGAGGTGCACAACAGCCGGTGCCAGCCGA GGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAAGAA CCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCGCCGAGCCGTGATTCGAGCGAGTACCAGAACGGCTTCCCATCGCTGAGAGTGTCGGCCGCCGTGTCGAGACCCACCGCGCTGAGACATTCGCGCAACTTCAGACCGTACTGTGACCATTTCATCTCGGACGAATTGCGCGAACTGGCGGA GGATGTGGTGGTGAAGCTGTTC AGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCCGCT G GAGCTGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08PJM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGGGAGGCGCACAACAGCCGGTGCCAGCCGAGGGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAA CCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCGCCGAGCCGTGATTCGAGCGAGTACCAGAACGGCTTCCCATCGCTGAGAGTGTCGGCCGCCGTGTCGAGACCCACCGCGCTGAGACATTCGCGCAACTTCAGACCGTACTGTGACCATTTCATCTCGGACGAATTGCGCGAACTGGCGGA GGATGTGGTGGTGAAGCTGTTC AGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCCTCAACGAGGTACTGAAGCTGCT G GAGCTGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTGCGCTGAAGC CAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM614477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGCCGCCGAGCCGTGATTCGAGCGAGTACCAGAACGGCTTCCCATCGCTGAGAGTGTCGGCCGCCGTGTCGAGACCCACCGCGCTGAGACATTCGCGCAACTTCAGACCGTACTGTGACCATTTCATCTCGGACGAATTGCGCGAACTGGCGGAGGGATGTGGTGGTGAAGCTGTTC AGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCTGCT G GAGCTGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTGCGCTCAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAAGCGCCGATCAGCTTGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCG AAAGCTA CCGCACCTTGGATGGTGGACGGTGCCATTCCCCTGTTGAGTGCGACACGGCAGGCATGCCCGGTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA CTTTCGGCAAGCATGCTGTCGGAAGGCAAAGCAGACGCACAAGAAGAAG                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS09JHL             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGCGCAACTTCAGACCGTACTGTGACCATTTCATCTCGGACGAATTGCGCGTTTTTGCGGA GGATGTGGTGGTGAAGCTGTTC AGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCTGCTGG GAG TGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTTCGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGGGCGCG AAAGCTACCCACACCTT GATGGTGGACGGTGCCATT CCCTGTTGAGTGCGACACGGCAGGCATGCCCGATACATTCGTGGCAATGTAGGGATGCCACGTGGTGATAGCTTTCGGCAAGCATGCTGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACGTATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAAAACACAAATACTCCTCGTTCCATCCCTTTGTCCCATTTCCCCGTACGCATACTAAATTCCAAACCAAGACAACCATACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACAAAAGGAAACGCGGCCCCACGCTG]
[-] EMBL CNS08NFB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGCGCGAACTGGCGGA GGATGTGGTGGTGAAGCTGTTC AGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCCGCT GCGAG TGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTGCGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCG AAAG TA CCGCACCTT GATGGTGGACGGTGCCATT CCCTGTTGAGTGCGACACGGCAGGCATGCCCGGTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA CTTTCGGCAAGCATGCCGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACATATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTCGTCCCCTTTCCCCGTACGCATTCTAAATTCCAACCCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACGAAAGGAAACGCGGCCCCACGCTG]
[-] EMBL CNS08XRA             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTGTTCAAGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCTGCTGG GAG TGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTTGGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCG AAAGCTA CCGCACCTT GATGGTGGACGGTGCCATT CCCTGTTGAGTGCGACACGGCAGGCATGCCTTTTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA CTTTCGGCAAGCATGCCGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACAAATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTCGTCCCCTTTCCCCGTACGCATTCTAAATTCCAACCCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACGAAAGGAAACGCGGCCCCACGCTG]
[-] EMBL CNS08FC2             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCTGCTGG GAG TGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTTGGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCGAAAAGCTA CCGCACCTT GATGGTGGACGGTGCCATT CCCTGTTGAGTGCGACACGGCAGGCATGCCCGGTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA CTTTCGGCAAGCATGCCGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACATATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTCGTCCCCTTTCCCCGTACGCATTCTAAATTCCAACCCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACGAAAGGAAACGCGGCCCCACGCTG]
[-] EMBL CNS09E5B             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCGCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCTGCT GAGAG TGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTGCGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTAAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCG AAAGCTA CCACACCTT GATGGTGGACGGTGCCATT CCCTGTTGAGTGCGACACGGCAGGCATGCCCGATACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA CTTTCGGCAAGCATGCTGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACGTATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTTGTCCCATTTCCCCGTACGCATACTAAATTCCAAACCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACAAAAGGAAACGCGGCCCCACGCTG]
[-] EMBL CNS09APU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAGGTACTGAAGCTGCTGG GAG TGCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTAT TGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCG AAAGCTA CCGCACCTT GATGGTGGACGGTGCCATT CCCTGTTGAGTGCGACACGGCAGGCATGCCCGGTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA CTTTCGGCAAGCATGCCGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACATATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTCGTCCCCTTTCCCCGTACGCATTCTAAATTCCAACCCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACGAAAGGAAACGCGGCCCCACGCTG]
[-] EMBL CNS08PJN             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCGCAAGGTGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGTTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTTGGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGC TGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCG AAAGCTA CCGCACCTT GATGGTGGACGGTGCCATT CCCTGTTGAGTGCGACACGGCAGGCATGCCCGGTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATA CTTTCGGCAAGCATGCCGTCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACATATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTCGTCCCCTTTCCCCGTACGCATTCTAAATTCCAACCCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCACTACCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGAGAAATGGGACGAAAGGAAACGCGGCCCCACGCTG]




>consensus_9350#0
CCCTGTTGTTGAAGGATGAAAAAGTGCTGCAGGAAGTGTTAAACCAAAGTTTCGACTGCA
ATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACGGGCAGCTATG
GAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCC
CCCACCAGTCCGATGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCAAGGAGGCGGACGGCA
GAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCA
AAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCC
GCCCGGGCCGACGTTTTAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCA
GATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGGGCGAAAAAAAAGAACCGAA
ACCGATCGTACCGATCGTACCGCAGCAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCG
CGAAGTGCCAAAAGAGAAGAAGCTAACACGACTGAAGAAGGACATCATCCGGAGCCGCAC
CGAGAAAGGCGCACCGGGCGACGGGCAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACA
GCCGGTGCCAGCCGAGGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGA
ACAACCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGC
TGCTGCATTAACGATGGGCCACCGCCGAGCCGTGATTCGAGCGAGTACCAGAACGGCTTC
CCATCGCTGAGAGTGTCGGCCGCCGTGTCGAGACCCACCGCGCTGAGACATTCGCGCAAC
TTCAGACCGTACTGTGACCATTTCATCTCGGACGAATTGCGCGAACTGGCGGAGGATGTG
GTGGTGAAGCTGTTCAGCTTCCAGTCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTC
GCCAACAAGCGGTTTGTGGTTGGCTTCAACGAGGTACTGAAGCTGCTGGAGTGCGCAAGG
TGCGCCTGGTGCTGATTGCACCGGATCTCGAACCAAACGAAACGATCGACCAGATGGTGG
CCAACGTGAAAATGCTCTGCCGCCAGAGCCAGGTACCGTACCTGTTTGCGCTGAAGCGCA
GAAAGATTGGATTCCATCTCCTGAAGAAGGCACCGATCAGCTGCGTCGGTGTGCTGAGCT
ATGCCGGGTGTGACGATACGGTCAAGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCGAAA
GCTACCGCACCTTGATGGTGGACGGTGCCATTCCCTGTTGAGTGCGACACGGCAGGCATG
CCCGGTACATTCGTGGCAATGTAGGGATGCCACGTGGTGATACTTTCGGCAAGCATGCCG
TCGGAAGGCAAAGCAGACGCACAAGAAGAAGATAAACATATTCTAGTCATTCCACGGGCC
ATTACGTGTAGCGTATCGCTCGGGCGAACACACAAATACTCCTCGTTCCATCCCTTCGTC
CCCTTTCCCCGTACGCATTCTAAATTCCAACCCAAGACAACCACACACAGACACATACTC
TCCACTTCTTTACTATAAACATCACTATCATGTCCTAATTAATGTGAGTGTAATATCATC
CATATAACAACAAGCATGGGTAGAGAAATGGGACGAAAGGAAACGCGGCCCCACGCTG

consensusID : consensus_9350#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 904
fasta sequence

                              [CCGCGGACGCGTGGGCGATGGTAAGGATAAACTGTGCGAGATAGCCTGGTGAAAGCTCCAGGATCTAATCCCTGT-TGTTGAAGGATGAAAAAGTGCT-GCAGGAAGTGTTAAACCAAAGTTTCGACAGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACAGACCAGCGGTGCCGGGGGCGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGACGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCA-AGG-AGGCGGAGCG-GCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGCTGAAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGG---GCGAGCG-GATGGAACCG-AAACCGATCGTACCGATCGTACCGCAGCAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAGGAGAAGAAGCTAACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGGCAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGAGGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAAACCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCGCCGA]

[+] EMBL BM590026             [CCGCGGACGCGTGGGCGATGGTAAGGATAAACTGTGCGAGATAGCCTGGTGAAAGCTCCAGGATCTAATCCCTGT TGTTGAAGGATGAAAAAGTGCT GCAGGAAGTGTTAAACCAAAGTTTCGACAGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACAGACCAGCGGTGCCGGGGGCGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGACGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCA AGG AGGCGGAGCG GCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGCTGAAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGG   GCGAGCG GATGGAACCG AAACCGATCGTACCGATCGTACCGCAGCAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAGGAGAA                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09E5A             [                                                                      CCTGTATGTTGAAGGATGAAAAAGTGCTAGCAGGAAGTGTTAAACCAAAGTTTCGACAGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACAGACCAGCGGTGCCGGGGGCGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGACGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCA AGG AGGCGGAG G GCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS09JHK             [                                                                       CTGT TGTTGAAGGATGAAAAAGTGCT GCAGGAAGTGTTAAACCAAAGTTTCGACAGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACAGACCAGCGGTGCCGGGGGCGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGACGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCACAGGAAGGCGGAGCGCGCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGCTGAAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGGCGCGCGAGCGCGATGGAACCGAAAACCGATCGTAC                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09APT             [                                                                                                                                    TGATGAGCGG CAG CAGTGG CGCCTCGGTGCACAACTCAGGGCCACAGACCAGCGGTGCCGGGGGCGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCCCACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGATGGCGAGAAGCTGTCTGCCCGGAAGGCTCGCA AGG AGGCGGAGCG GCAGAAGAAGCAGGCCAAAAAGTACGAGGAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGCTTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGTTGAAGACGAAGAAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGGGAGCAGCTGGCCGGGG   GCGAGCG GATGGAACCG AAACCGATCGTACCGATCGTACCGCAGCAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAAGAGAAGAAGCTAACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGGCAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGAGGGTGGTAAAGGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAAACCTCACCGTCGGGCGGTGGTGCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCGCCGA]




>consensus_9350#1
CCGCGGACGCGTGGGCGATGGTAAGGATAAACTGTGCGAGATAGCCTGGTGAAAGCTCCA
GGATCTAATCCCTGTTGTTGAAGGATGAAAAAGTGCTGCAGGAAGTGTTAAACCAAAGTT
TCGACAGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACAG
ACCAGCGGTGCCGGGGGCGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCC
CACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGACGGCGAGAAGCTG
TCTGCCCGGAAGGCTCGCAAGGAGGCGGAGCGGCAGAAGAAGCAGGCCAAAAAGTACGAG
GAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGC
TTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGCTGAAGACGAAG
AAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGG
GAGCAGCTGGCCGGGGGCGAGCGGATGGAACCGAAACCGATCGTACCGATCGTACCGCAG
CAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAGGAGAAGAAGCTA
ACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGG
CAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGAGGGTGGTAAA
GGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAAACCTCACCGTCGGGCGGTGGT
GCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCG
CCGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9350#0      ------------------------------------------------------------
consensus_9350#1      CCGCGGACGCGTGGGCGATGGTAAGGATAAACTGTGCGAGATAGCCTGGTGAAAGCTCCA 60
                                                                                  

consensus_9350#0      ---------CCCTGTTGTTGAAGGATGAAAAAGTGCTGCAGGAAGTGTTAAACCAAAGTT 51
consensus_9350#1      GGATCTAATCCCTGTTGTTGAAGGATGAAAAAGTGCTGCAGGAAGTGTTAAACCAAAGTT 120
                               ***************************************************

consensus_9350#0      TCGACTGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCAC-- 109
consensus_9350#1      TCGACAGCAATGATGAGCGGCCAGCCAGTGGCCGCCTCGGTGCACAACTCAGGGCCACAG 180
                      ***** ****************************************************  

consensus_9350#0      -----------------------GGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCC 146
consensus_9350#1      ACCAGCGGTGCCGGGGGCGCCACGGGCAGCTATGGAGCAGGAAACGCACAACCGTCCTCC 240
                                             *************************************

consensus_9350#0      CACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGATGGCGAGAAGCTG 206
consensus_9350#1      CACCACCAGCAACCGCAGCAGCATCAACCCACCCCCCACCAGTCCGACGGCGAGAAGCTG 300
                      *********************************************** ************

consensus_9350#0      TCTGCCCGGAAGGCTCGCAAGGAGGCGGA-CGGCAGAAGAAGCAGGCCAAAAAGTACGAG 265
consensus_9350#1      TCTGCCCGGAAGGCTCGCAAGGAGGCGGAGCGGCAGAAGAAGCAGGCCAAAAAGTACGAG 360
                      ***************************** ******************************

consensus_9350#0      GAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGC 325
consensus_9350#1      GAGCAGCTGAAGAAGATTCGCGGACCGAAAAGCCAAAAGTTGCAAATTATCGACGAAAGC 420
                      ************************************************************

consensus_9350#0      TTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGTTTTAGACGAAG 385
consensus_9350#1      TTTCTGGAAAAGTATCGGCACGTGCAGTCGCTGCCGCCCGGGCCGACGCTGAAGACGAAG 480
                      ************************************************ *  ********

consensus_9350#0      AAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGG 445
consensus_9350#1      AAGCGCTCGAAAAAGGCCCCGACCGATGTGGTGCAGATCAACCTGTCGGAATGCATCCGG 540
                      ************************************************************

consensus_9350#0      GAGCAGCTGGCCGGGGGCGAAAAAAAAGAACCGAAACCGATCGTACCGATCGTACCGCAG 505
consensus_9350#1      GAGCAGCTGGCCGGGGGCGAGCGGATGGAACCGAAACCGATCGTACCGATCGTACCGCAG 600
                      ********************    *  *********************************

consensus_9350#0      CAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAAGAGAAGAAGCTA 565
consensus_9350#1      CAACCGTTGCTGCTGCTGCACAAAGGCAAGCAGCGCGAAGTGCCAAAGGAGAAGAAGCTA 660
                      *********************************************** ************

consensus_9350#0      ACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGG 625
consensus_9350#1      ACACGACTGAAGAAGGACATCATCCGGAGCCGCACCGAGAAAGGCGCACCGGGCGACGGG 720
                      ************************************************************

consensus_9350#0      CAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGAGGGTGGTAAA 685
consensus_9350#1      CAGCAAAGCGCTGGCAATGCGGGAGGCGCACAACAGCCGGTGCCAGCCGAGGGTGGTAAA 780
                      ************************************************************

consensus_9350#0      GGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAA-CCTCACCGTCGGGCGGTGGT 744
consensus_9350#1      GGTGCCAACGGGATGGTTAGTAAGCAATCGAGCGAACAAACCTCACCGTCGGGCGGTGGT 840
                      *************************************** ********************

consensus_9350#0      GCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCG 804
consensus_9350#1      GCAGTGGACTCGCCGTTCCTGAAAGCGATCGAACGCTGCTGCATTAACGATGGGCCACCG 900
                      ************************************************************

consensus_9350#0      CCGAGCCGTGATTCGAGCGAGTACCAGAACGGCTTCCCATCGCTGAGAGTGTCGGCCGCC 864
consensus_9350#1      CCGA-------------------------------------------------------- 904
                      ****                                                        

consensus_9350#0      GTGTCGAGACCCACCGCGCTGAGACATTCGCGCAACTTCAGACCGTACTGTGACCATTTC 924
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      ATCTCGGACGAATTGCGCGAACTGGCGGAGGATGTGGTGGTGAAGCTGTTCAGCTTCCAG 984
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      TCGAAAGCGTATGCCAAAAACCCGATCAAAGCGGTCGCCAACAAGCGGTTTGTGGTTGGC 1044
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      TTCAACGAGGTACTGAAGCTGCTGGAGTGCGCAAGGTGCGCCTGGTGCTGATTGCACCGG 1104
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      ATCTCGAACCAAACGAAACGATCGACCAGATGGTGGCCAACGTGAAAATGCTCTGCCGCC 1164
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      AGAGCCAGGTACCGTACCTGTTTGCGCTGAAGCGCAGAAAGATTGGATTCCATCTCCTGA 1224
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      AGAAGGCACCGATCAGCTGCGTCGGTGTGCTGAGCTATGCCGGGTGTGACGATACGGTCA 1284
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      AGCAGATGCTGTCGGTGGTGGAGCAGGAGCGCGAAAGCTACCGCACCTTGATGGTGGACG 1344
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      GTGCCATTCCCTGTTGAGTGCGACACGGCAGGCATGCCCGGTACATTCGTGGCAATGTAG 1404
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      GGATGCCACGTGGTGATACTTTCGGCAAGCATGCCGTCGGAAGGCAAAGCAGACGCACAA 1464
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      GAAGAAGATAAACATATTCTAGTCATTCCACGGGCCATTACGTGTAGCGTATCGCTCGGG 1524
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      CGAACACACAAATACTCCTCGTTCCATCCCTTCGTCCCCTTTCCCCGTACGCATTCTAAA 1584
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      TTCCAACCCAAGACAACCACACACAGACACATACTCTCCACTTCTTTACTATAAACATCA 1644
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      CTATCATGTCCTAATTAATGTGAGTGTAATATCATCCATATAACAACAAGCATGGGTAGA 1704
consensus_9350#1      ------------------------------------------------------------
                                                                                  

consensus_9350#0      GAAATGGGACGAAAGGAAACGCGGCCCCACGCTG 1738
consensus_9350#1      ----------------------------------