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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9354#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 912 fasta sequence
[CCG-GCCGGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTTGCAACGTTCAACCGTATTCTGGTTCACCAGCAAATTTTGCTGTGTACACTGCTCTTATTGAACCGCACGGACGTATCATGGGCCTTGATCTACCCGACGGTGGTCATTTAACCCACGGTTTCATGACTCAAACGAAAAAAATATCTGCTACATCAATCTTCTTCGAAAGCATGTCATATAAAGTCGATCCAGTTACT-GGGTTGATCGATTACGACAAGATGGGAGAGACAGCGCGCCTCTTCAAA]
[+] EMBL BM598621 [CCG GACAGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAATTATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGcaa ]
[+] EMBL BM586553 [CCGTGACAGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAAGAATGGGGgt ]
[+] EMBL BM588113 [ CCGGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTT ]
[+] EMBL BM595760 [ CCGGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAATTATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACC ]
[+] EMBL BM626029 [ CCGGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAATTATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAA ]
[+] EMBL BM631813 [ ccGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTTGCAACGTTCAACCGTATTCTGGTTCACCAGCAAATTTTGCTGTG ]
[+] EMBL BX606860 [ GAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGG ]
[+] EMBL BX617616 [ TCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGC AAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTTGCAACGTTCAACCGTATTCTGGTTCACCAGCAAATTTTGCTGTGTACACTGCTCTTATTGAACCGCACGGACGTATCATGGGCCTTGATCTACCCGACGGTGGTCATTTAACCCACGGTTTCATGACTCAAACGAAAAAAATATCTGCTACATCAATCTTCTTCGAAAGCATGTCATATAAAGTCGATCCAGTTACT GGGTTGATCGATTACGACAAGATGGGAGAGACAGCGCGCCTCTTCAAA]
[+] EMBL BM655798 [ ccgCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAATTATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGCTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTTGCAACGTTCAACCGTATTCTGGTTCACCAGCAAATTTTGCTGTGTACACTGCTCTTATTGAACCGCACGGACGTATCATGGGCCTTGATCTACCCGACGGTGGTCATTTAACCCACGGTTTCATGACTCAAACGAAAAAAATATCTGCTACATCAATCTTCTTCGAAAGCATGCCATATAAAGTCGATCCAGTTACTGGGGTTGATCGATTACGAC ]
consensusID : consensus_9354#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 784 fasta sequence
[ACGCATGAAGTATCCTAGAGGCTTCACTGATATTTTATTAGCTCAACAAGCGTCCACAGCACTCGCCCAGGGTAAGGGGGAGAGGGAGGGGTACCACCATAATCACGGAATTTAATTACTTTCACACCTGCGAAACCCCGGTGCTTTACTTCCACTTGTTGTTGTCGTAGTCCCACTTGGACGACACGCCGTGGATCGGGTTGATGTTGAGGTCGAGCATACGCTTCAGCTGGGCCTTCTGGTGCTCCTCGTCGAACGTTTCCGGGATCGGTTCGTACACGAACGCCTTCAGCAGCATCATGCCGATCAGGCTCATGGAGGCGGCGATCAGGGCGGCGCCGAGGCACGCCTTCCACTCGCCGGTCGGGTGCTTCATCTCGGCGAACGTCTGGCAGAACGAGGCCCGGTACAGGGCCTTCTTCTCCTGCACCGACATCTTCTTCCAGTCACCCTTCTCCTTCTCGCGCAGAGCCAGGACATCACGGGTGTTTTCCTTGAAGCGGATGGCCGGCATCGGGTAGTCGACGCGGTCAGCGTACACCGGCAGACCGTTCCAGCCGTGTCCGACCACCTCCCGCTTGCCGATCTTCTGCGTGATCATGTCGTGGGACTGGCGGGTGCCAATCTTGGCACGCAGCGCAGTGCGGGACCCCACCCGACGCTAGGTTCACGTTCGCCATCGTTTCTCCAGTTAATTTGGAACCGACCGAGAATCGAAGAAGTTTTTCGCTTCAGTAGGCCAACAGTTCTCGAGGAATTCCGCAGCTTTTAGAACAATACCCCT]
[+] EMBL CNS08QTB [ACGCATGAAGTATCCTAGAGGCTTCACTGATATTTTATTAGCTCAACAAGCGTCCACAGCACTCGCCCAGGGTAAGGGGGAGAGGGAGGGGTACCACCATAATCACGGAATTTAATTACTTTCACACCTGCGAAACCCCGGTGCTTTACTTCCACTTGTTGTTGTCGTAGTCCCACTTGGACGACACGCCGTGGATCGGGTTGATGTTGAGGTCGAGCATACGCTTCAGCTGGGCCTTCTGGTGCTCCTCGTCGAACGTTTCCGGGATCGGTTCGTACACGAACGCCTTCAGCAGCATCATGCCGATCAGGCTCATGGAGGCGGCGATCAGGGCGGCGCCGAGGCACGCCTTCCACTCGCCGGTCGGGTGCTTCATCTCGGCGAACGTCTGGCAGAACGAGGCCCGGTACAGGGCCTTCTTCTCCTGCACCGACATCTTCTTCCAGTCACCCTTCTCCTTCTCGCGCAGAGCCAGGACATCACGGGTGTTTTCCTTGAAGCGGATGGCCGGCATCGGGTAGTCGACGCGGTCAGCGTACACCGGCAGACCGTTCCAGCCGTGTCCGACCACCTCCCGCTTGCCGATCTTCTGCGTGATCATGTCGTGGGACTGGCGGGTGCCAATCTTGGCACGCAGCGCAGTGCGGGACCCCACCCGACGCTAGGTTCACGTTCGCCATCGTTTCTCCAGTTAATTTGGAACCGACCGAGAATCGAAGAAGTTTTTCGCTTCAGTAGGCCAACAGTTCTCGAGGAATTCCGCAGCTTTTAGAACAATACCCCT]
consensusID : consensus_9354#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[CCGGTCTACCCAACCTGCGAATGCTAAATATATTTCGTGAATGTGATCACTTCAGTGCTCTGTGAACAGTGGTTTGGAAAAGTACGCAGTTGAGTCCGAGTCGGTCCGCGAGCTACACAAGATCACAAAATGGCCAACGATCTGAAGGATGTTGAAATTGAGAAGGCGCAGTTCGTCTTCTCCGTCTACGATTGGGAAGGTTCCGGCCAGATGGATGCCATGGATCTTGGCAACGCTCTTCGCGCCCTGAACCTGAACCCAACCATCGAGCTGATCGGCAAGATGGGCGGCACCCAGAAGCGCGGTGAGAAGAAGATCAAGTTCGAGGAATTCCTGCCAATCTTCTCGCAGGTCAAGAAGGAGAAGGAACAGGGCTGCTTCGAGGACTTCCTGGAGTGTCTGAAGCTGTACGACAAGAATGAGGATGGCACCATGCTGCTCGCAGAACTGACCCACAGCTTAACGGCTCTCGGTGAGCGACTGGATGATGTGGAGCTGGACAACGTCATGAAGGACTGCATGGACCCGGAGGATGATGACGGCAACATCCCATACGCACCGTTCCTCAAGAAGATGATGGACAACATGGTCGTCATTGACCACGTCAAGTAAATTCGTCGCTAACTCAATTGTGTACTTTTCAAAAGTCTCCACTTAATATGTC]
[+] EMBL BM652248 [CCGGTCTACCCAACCTGCGAATGCTAAATATATTTCGTGAATGTGATCACTTCAGTGCTCTGTGAACAGTGGTTTGGAAAAGTACGCAGTTGAGTCCGAGTCGGTCCGCGAGCTACACAAGATCACAAAATGGCCAACGATCTGAAGGATGTTGAAATTGAGAAGGCGCAGTTCGTCTTCTCCGTCTACGATTGGGAAGGTTCCGGCCAGATGGATGCCATGGATCTTGGCAACGCTCTTCGCGCCCTGAACCTGAACCCAACCATCGAGCTGATCGGCAAGATGGGCGGCACCCAGAAGCGCGGTGAGAAGAAGATCAAGTTCGAGGAATTCCTGCCAATCTTCTCGCAGGTCAAGAAGGAGAAGGAACAGGGCTGCTTCGAGGACTTCCTGGAGTGTCTGAAGCTGTACGACAAGAATGAGGATGGCACCATGCTGCTCGCAGAACTGACCCACAGCTTAACGGCTCTCGGTGAGCGACTGGATGATGTGGAGCTGGACAACGTCATGAAGGACTGCATGGACCCGGAGGATGATGACGGCAACATCCCATACGCACCGTTCCTCAAGAAGATGATGGACAACATGGTCGTCATTGACCACGTCAAGTAAATTCGTCGCTAACTCAATTGTGTACTTTTCAAAAGTCTCCACTTAATATGTC]
consensusID : consensus_9354#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 637 fasta sequence
[CCGCCCACGCGTCCGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGA-TTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTT]
[+] EMBL BM654989 [CCGCCCACGCGTCCGCAAACTTAAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGA TTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTTTGGCTCAAAAGCGTGCCCTCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTT]
[+] EMBL BX603170 [ AAGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACTAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGATTTTGATAAGAAAG ]
[+] EMBL BM586423 [ ccgGTCAGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGA TTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAGAAGGTTTGCCTGGCCAACGTTACTATGGAGGTAATGA ]
[+] EMBL BX605812 [ ACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGTATTAGTGTCGGCGCACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTTTAACATGATGATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATTCAGTGTGCGTAGCCTGTCAACGATAATGCGAGCAAGAGTGTCTCCACATCTAAAATATCCAGAAGCATCCGTCTATACCAGTTCTTTGTCGAATACGCCTCGTGAGGGATATAGCCATAAGTCCTGTTTTAGTTCGGCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAACTATTGCATGAGACCTTGTGGGATCAAGATCCGGAGCTTATGGA TTTGATAAGAAAGGAAAAGACGCGTCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTCTCTCTGTGCTGCAGTGTCTCAGCTCCTGTTTGCATAACAAATATTCAG ]
consensusID : consensus_9354#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 621 fasta sequence
[TTTTATCTTCTTAGTACACCAAGTCCGATCCTTTATCATTACCTTTGTATTGTGTTTTTCTTCATATCGTTTAAGATTAAATTACAAAACCCCTAGTAGCGAATCCGGAACGAACCCGGGTCGCAGGTGTCCGAAGTCAGGATCGGAGTATCGGTGCCGCGGTACGGCGCCGTTGGGGGGCGGGTACCCGGGATTTTTTTACGCTTTTCCACTCGCCACTGCTACCGATTGCAAGAAAATTACTTCTTCTTCGGCTGCTGTTGCTTCTTCTCCTTCTTGGCTGCGCTGGCCTCACCCTTCTGCTGGGCCGCCGGTTCCGGCTTGCGCTTCGGGGCTTCCTTCTTGGCTCCAGACGGTGTCTCTTGCGCTGCAGCACCACCGGCGTGATCAGACGCTGGATCTTCGGCGACTTGAAGCGCGGCACGTTCACGTCGGTCAGCCCGGGAATGTCTTTCTCGCCCTTGCGCACGATCACCAGTGCCAGGGCGGACAGGTTCTGGTCGACGATGCAACCACGCACCGACTTGCGCTTGCGCTCGCCGGCACGGCGGGGCGGTAGCACGAGTGGCCCTTCTTCAGGAGCAGACGGACACGAGTTTTCGTCAGCGGCAATGTATAGGC]
[+] EMBL CNS096I7 [TTTTATCTTCTTAGTACACCAAGTCCGATCCTTTATCATTACCTTTGTATTGTGTTTTTCTTCATATCGTTTAAGATTAAATTACAAAACCCCTAGTAGCGAATCCGGAACGAACCCGGGTCGCAGGTGTCCGAAGTCAGGATCGGAGTATCGGTGCCGCGGTACGGCGCCGTTGGGGGGCGGGTACCCGGGATTTTTTTACGCTTTTCCACTCGCCACTGCTACCGATTGCAAGAAAATTACTTCTTCTTCGGCTGCTGTTGCTTCTTCTCCTTCTTGGCTGCGCTGGCCTCACCCTTCTGCTGGGCCGCCGGTTCCGGCTTGCGCTTCGGGGCTTCCTTCTTGGCTCCAGACGGTGTCTCTTGCGCTGCAGCACCACCGGCGTGATCAGACGCTGGATCTTCGGCGACTTGAAGCGCGGCACGTTCACGTCGGTCAGCCCGGGAATGTCTTTCTCGCCCTTGCGCACGATCACCAGTGCCAGGGCGGACAGGTTCTGGTCGACGATGCAACCACGCACCGACTTGCGCTTGCGCTCGCCGGCACGGCGGGGCGGTAGCACGAGTGGCCCTTCTTCAGGAGCAGACGGACACGAGTTTTCGTCAGCGGCAATGTATAGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9354#0 CCGGCCGGCGTCTCAAGAAGGCCGCCAGTTCTTCAAGCTTTTTGGCAAACT---TAAGTC 57
consensus_9354#3 ------------------------------CCGCCCACGCGTCCGCAAACT---TAAGTC 27
consensus_9354#4 ---------------------------TTTTATCTTCTTAGTACACCAAGT---CCGATC 30
consensus_9354#1 ACGCATGAAGTATCCTAGAGGCTTCACTGATATTTTATTAGCTCAACAAGCGTCCACAGC 60
consensus_9354#2 -------------------------------------CCGGTCTACCCAAC--CTGCGAA 21
*
consensus_9354#0 AGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGT-ATTAGTGTCGGCGC 116
consensus_9354#3 AGGTGCACGGGTTGTGGTATTGAGCTCAACCCAGAGTTTTCTTGT-ATTAGTGTCGGCGC 86
consensus_9354#4 CTTTATCATTACCTTTGTATTGTGTTTTTCTTCATATCGTTTAAG-ATTAA-ATTACAAA 88
consensus_9354#1 ACTCGCCCAGGGTAAGGGGGAGAGGGAGGGGTACCACCATAATCA-CGGAATTTAATTAC 119
consensus_9354#2 TGCTAAATATATTTCGTGAATGTGATCACTTCAGTGCTCTGTGAACAGTGGTTTGGAAAA 81
* * * *
consensus_9354#0 ACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTT--TAACATG----AT 170
consensus_9354#3 ACACGTAACGAGAGAAGATAAAATAGATCTCTCGCACAAGTCGTT--TAACATG----AT 140
consensus_9354#4 ACCCCTAGT-AGCGAATCCGGAACGAACCCGGGTCGCAGGT-GTC--CGAAGTC----AG 140
consensus_9354#1 TTTCACACC-TGCGAAACCCCGGTGCTTTACTTCCACTTGTTGTTGTCGTAGTC----CC 174
consensus_9354#2 GTACGCAGT---TGAGTCCGAGTCGGTCCGCGAGCTACACAAGATCACAAAATGGCCAAC 138
* * ** * * *
consensus_9354#0 GATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATT-CAGTGTGCG-------- 221
consensus_9354#3 GATCAGTGCAGTGAGAGCATATCTCTCGCTCGCTCCAGCATT-CAGTGTGCG-------- 191
consensus_9354#4 GATCGGAGTATCGGTGCCGCGGTACG-GCGCCGTTGGGGGGC-GGGTACCCG-------- 190
consensus_9354#1 ACTTGGACGAC--ACGCCGTGGATCGGGTTGATGTTGAGGTC-GAGCATACGCTTCAGCT 231
consensus_9354#2 GATCTGAAGGATGTTGAAATTGAGAAGGCGCAGTTCGTCTTCTCCGTCTACGATTGGGAA 198
* * * * **
consensus_9354#0 TAGCCTGTCAACGATAATG--CGAGCAAGAGTGTCTCCACATCTAAAATA-----TCCAG 274
consensus_9354#3 TAGCCTGTCAACGATAATG--CGAGCAAGAGTGTCTCCACATCTAAAATA-----TCCAG 244
consensus_9354#4 GGATTTTTTTACGCTTTTC--CACTCGCCACTGCTACCGATTGCAAGAAAATTACTTCTT 248
consensus_9354#1 GGGCCTTCTGGTGCTCCTCGTCGAACGTTTCCGGGATCGGTTCGTACACGA-----ACGC 286
consensus_9354#2 GGTTCCGGCCAGATGGATG--CCATGGATCTTGGCAACGCTCTTCGCGCCCTGAACCTGA 256
* * * *
consensus_9354#0 AAGCATCCGTCTATACCAGTTCT--TTGTCGA-ATACGCCTCGTGAGGGATATAGCCATA 331
consensus_9354#3 AAGCATCCGTCTATACCAGTTCT--TTGTCGA-ATACGCCTCGTGAGGGATATAGCCATA 301
consensus_9354#4 CTTCGGCTGCTGTTGCTTCTTCTCCTTCTTGG-CTGCGCTGGCCTCACCCTTCTGCTGGG 307
consensus_9354#1 CTTCAGCAGCATCATGCCGATCAGGCTCATGG-AGGCGGCGA--TCAGGGCGGCGCCGAG 343
consensus_9354#2 ACCCAAC--CATCGAGCTGATCGGCAAGATGGGCGGCACCCAGAAGCGCGGTGAGAAGAA 314
* * ** * * *
consensus_9354#0 AGTCCTGTTTTAGTTCG-GCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAA 390
consensus_9354#3 AGTCCTGTTTTAGTTCG-GCATCGCGAAAATCTTCCTCGAAGATGGCTGGAAATGCAAAA 360
consensus_9354#4 CCGCCGGTTCCGGCTTGCGCTTCGGGGCTTCCTTCTTGGCTCCAGACGGTGTCTCTTGCG 367
consensus_9354#1 GCACGCCTTCCA-CTCGCCGGTCGGGTGCTTCATCTCGGCGAACGTCTGGCAGAACGAGG 402
consensus_9354#2 GATCAAGTTCGAGGAATTCCTGCCAATCTTCTCGCAGGTCAAGAAGGAGAAGGAACAGGG 374
* ** * * *
consensus_9354#0 CTATTGCATGAGAC-CTTGTGGGATCAAGATCCGGAGCTTATG-GATTTGATAAGAAAGG 448
consensus_9354#3 CTATTGCATGAGAC-CTTGTGGGATCAAGATCCGGAGCTTATG-GATTTGATAAGAAAGG 418
consensus_9354#4 CTGCAGCACCA----CCGGCGTGATCAGACGCTGGATCTTCGGCGACTTGA--AGCGCGG 421
consensus_9354#1 CC-CGGTACAGGG--CCTTCTTCTCCTGCACCGACATCTTCTTCCAGTCAC---CCTTCT 456
consensus_9354#2 CTGCTTCGAGGACTTCCTGGAGTGTCTGAAGCTGTACGACAAGAATGAGGATGGCACCAT 434
* * * * *
consensus_9354#0 AAAAGACGCG---TCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTC 505
consensus_9354#3 AAAAGACGCG---TCAGATCAGAGGTTTAGAGATGATTGCAAGCGAAAACTTTACTTCTC 475
consensus_9354#4 CACGTTCACG---TC-GGTCAG---CCCGGGAATGTCTTT--CTCGCCCTTGCGCACGAT 472
consensus_9354#1 CCTTCTCGCG---CAGAGCCAGGACATCACGGGTGTTTTCC-TTGAAGCGGATGGCCGGC 512
consensus_9354#2 GCTGCTCGCAGAACTGACCCACAGCTTAACGGCTCTCGGTGAGCGACTGGATGATGTGGA 494
* * ** *
consensus_9354#0 TCTCTGT---GCTGCAGTGTCTCA----GCTCCTGTTTGC-ATAACAAATATTC---AGA 554
consensus_9354#3 TCTCTGT---GCTGCAGTGTCTCA----GCTCCTGTTTGC-ATAACAAATATTC---AGA 524
consensus_9354#4 CACCAGT---GCCAGGGCGGACAG----GTTCTGGTCGAC-GATGCAACCACGC---ACC 521
consensus_9354#1 ATCGGGTA--GTCGACGCGGTCAGCGT-ACACCGGCAGACCGTTCCAGCCGTGTCCGACC 569
consensus_9354#2 GCTGGACAACGTCATGAAGGACTGCATGGACCCGGAGGATGATGACGGCAACATCCCATA 554
* * * * * *
consensus_9354#0 AGGTTTGCCTGGC-CAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTT 613
consensus_9354#3 AGGTTTGCCTGGC-CAACGTTACTATGGAGGTAATGAATTTATTGACCAAATAGAGCTTT 583
consensus_9354#4 GACTTGCGCTTGC-GCTCGCCGGCACGGCGGGGCGGTA------GCACGAGTGGCCCTTC 574
consensus_9354#1 ACCTCCCGCTTGCCGATCTTCTGCGTGATCATGTCGTGGGACTGGCGGGTGCCAATCTTG 629
consensus_9354#2 CGCACCGTTCCTCAAGAAGATGATG-GACAACATGGTCGTCATTGACCACGTCAAGTAAA 613
* * * *
consensus_9354#0 TGGCTCAAAAGCGTGCCC-TCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTTGCAAC 672
consensus_9354#3 TGGCTCAAAAGCGTGCCC-TCGAAGCTTATCGGTTAAGCCCCGAGGAATGGGGTT----- 637
consensus_9354#4 T---TCAGGAGCAGACGG-ACACGAGTTTTCG--TCAGCGGCAATGTATAGGC------- 621
consensus_9354#1 GCACGCAGCGCAGTGCGGGACCCCACCCGACGCTAGGTTCACGTTCGCCATCGTTTCTCC 689
consensus_9354#2 T---TCGTCGCTAACTCAATTGTGTACTTTTCAAAAGTCTCCACTTAATATGTC------ 664
* *
consensus_9354#0 GTTCAACCGTATTCTGGTTCACCAGCAAATTTTGCTGTGTACACTGCTCTTATTGAACCG 732
consensus_9354#3 ------------------------------------------------------------
consensus_9354#4 ------------------------------------------------------------
consensus_9354#1 AGTTAATTTGGAACCGACCGAGAATCGAAGAAGTTTTTCGCTTCAGTAGGCCAACAGTTC 749
consensus_9354#2 ------------------------------------------------------------
consensus_9354#0 CACGGACGTATCATGGGCCTTGATCTACCCGACGGTGGTCATTTAACCCACGGTTTCATG 792
consensus_9354#3 ------------------------------------------------------------
consensus_9354#4 ------------------------------------------------------------
consensus_9354#1 TCGAGGAATTCCGCAGCTTTTAGAACAATACCCCT------------------------- 784
consensus_9354#2 ------------------------------------------------------------
consensus_9354#0 ACTCAAACGAAAAAAATATCTGCTACATCAATCTTCTTCGAAAGCATGTCATATAAAGTC 852
consensus_9354#3 ------------------------------------------------------------
consensus_9354#4 ------------------------------------------------------------
consensus_9354#1 ------------------------------------------------------------
consensus_9354#2 ------------------------------------------------------------
consensus_9354#0 GATCCAGTTACTGGGTTGATCGATTACGACAAGATGGGAGAGACAGCGCGCCTCTTCAAA 912
consensus_9354#3 ------------------------------------------------------------
consensus_9354#4 ------------------------------------------------------------
consensus_9354#1 ------------------------------------------------------------
consensus_9354#2 ------------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||