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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9364#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1569 fasta sequence
[CCGCCCACGCGTCCGCCCCCGCTGAAAGGACGTGTCTGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG-AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG-TGACGTCTTGGCTGAGCGGA------TTTTTTTTATTTGAAG--C--ACACACACACATA-CCCGCGTCGGTGGGCCTGG-TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAG--GCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGAACCGAATCACCCATCCGAACATCCGAACTTCGGGCTTAGTGGTGTGACATTTTTGGTGCACATACGGTGATTAGTAGCTCATCCNGCACGCAGTGAAAGATTCTACGCGAAGCAGCAGCACAGGAGAGATACAGCAGCAACATGAATAACCTGATTGCGAAGGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCAACGGATCACCATACCGTGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCAAAGGAGGTGCTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTCACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGGCATCTTTCCGGGCGGCCGCATCGAACAGTACATACCGGCCCGGGCCCTGCTGACGGCGGAGCTGAGCGATGCAAAGATATCGATAAAGGTAGCGGAAAAGATGGCCGCCATCCACAGTA]
[+] EMBL BM609627 [CCGCCCACGCGTCCGCCCACGCGTCCGGGACGTATCTGGTTCATTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACTTGTGTGTTAGGCACGCACCACCC ACAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGGTGAGTTTATTGTTCTCCATTTGCCGAA AGCGTACCATGCGGTGTACGGTAGAGAAGTGAATAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTATAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATTGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCTCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTGCGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGATT TTTTTTTTATTTGAAG C ACACACACACATA CCCGCGTCGGTGGGCCTGG ]
[+] EMBL BM630995 [ CCGCTGAAAGGACGTGTCT GTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGAGACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTACCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCTTTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTATTTGAAGCAC ACACACACACATA CCCGCGTCGGTGGGCCTGG TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCG ]
[+] EMBL BM633101 [ CCGCTGAAAGGACGTGTTTGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACTTGTGTGTTAGGTACGCACCACCCAG AAAAAAAACGTTGACTGCACAAAGTGTATGCAAGTTTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAA AGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATTGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTG ]
[+] EMBL CNS08UO5 [ CTGGAAGGACGTATCTGGTTCGTTCGGTGCTCTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATAATTCTTAACTAAACCTGTGTGTTAGGTACGCACTACCCAGAAG AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAG ATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAGTTGACGTCTTGGCTGAGCGGATTTT TTTTTTTTATTTGAAG CATACACACACACATA CCCGCGTCGGTGGGCCTGG TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCG ]
[+] EMBL BM591664 [ ccgGAAAGGACGTGTTTGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACTTGTGTGTTAGGTACGCACCACCCAG AAAAAAAACGTTGACTGCACAAAGTGTATGCAAGTTTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAA AGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATTGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGTATTTTTTTTTTTTTTATTTGAAG C ACACACACACATACCCCGCGTCGGTGGGCCT ]
[+] EMBL BX627829 [ GTGTCT GTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG AAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGACGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTT ]
[+] EMBL BX624970 [ TGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGCACCGAGAACGGGCGACGCAA CGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTTATTTGAAG CACACACACATA CTCGCGTCGGTGGGCCTGG TGCTGCGCT ]
[+] EMBL BM632974 [ ccgGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGAGACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTACCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCTTTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTATTTGAAGCAC ACACACACACATACCCCGCGTCGGTGGGCCTGGCTGCTGTG ]
[+] EMBL BM589521 [ ccgGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGAGACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTACCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCTTTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTATTTGAAGCAC ACACACACACATA CCCGCGTCGGTGGGCCTGG TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAG GCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCC ]
[+] EMBL BX627460 [ CATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGCACCGAGAACGGGCGACGCAA CGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTTATTTGAAG CACACACACATA CTCGCGTCGGTGGGCCTGG TGCTGCGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGAACCGAATCACCCATCCGAACATCCGAACTTCGGGCTTAGTGGTGTGACATTTTTGGTGCACATACGGTGATTAGTAGCTCATCCNGCACGCAGTGAAAGAT ]
[-] EMBL CNS08UO6 [ gTGGTGCACATACGGTGATTAGTAGCTCATCCGGCACGCAGTGAAAGATTCTACGCGAAGCAGCAGCACAGGAGAGATACAGCAGCAACATGAATAACCTGATTGCGAAGGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCAACGGATCACCATACCGTGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCAAAGGAGGTGCTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTCACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGGCATCTTTCCGGGCGGCCGCATCGAACAGTACATACCGGCCCGGGCCCTGCTGACGGCGGAGCTGAGCGATGCAAAGATATCGATAAAGGTAGCGGAAAAGATGGCCGCCATCCACAGTA]
consensusID : consensus_9364#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 828 fasta sequence
[CCGGCTGAAAGGACGTGTCTGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGCACACACACACACACATACCCGCGTCGCTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGTATACCGAATCACCCATCCGAACATCCGAACTTCAGGCTTAGTGGNGTGACATTTTTGGNGCACATACGGNGATTAGTAG]
[+] EMBL BM601697 [CCGGCTGAAAGGACGTGTCTGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAA ]
[+] EMBL BX628634 [ TCTGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGCACACACACACACACATACCCGCGTCGCTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGTATACCGAATCACCCATCCGAACATCCGAACTTCAGGCTTAGTGGNGTGACATTTTTGGNGCACATACGGNGATTAGTAG]
[+] EMBL BX619920 [ GTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATNCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCT ]
consensusID : consensus_9364#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 602 fasta sequence
[CCGGGCCTGATAAAGTGTAAAGTGACTTGCAATTGTTAGGATTAGCATAGAAATATGTCAAGGAGATACACGATTGATTAGGTGTTCAGGAGCGGCTCAGTTTCCGGATACTTTGCCCAAGCAATCATCACCGTCTGAAGGATTTATAAAGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCATCGGATCACCATACCGCGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCGAAGGAGGTACTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTTACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGG]
[+] EMBL BM616730 [CCGGGCCTGATAAAGTGTAAAGTGACTTGCAATTGTTAGGATTAGCATAGAAATATGTCAAGGAGATACACGATTGATTAGGTGTTCAGGAGCGGCTCAGTTTCCGGATACTTTGCCCAAGCAATCATCACCGTCTGAAGGATTTATAAAGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCATCGGATCACCATACCGCGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCGAAGGAGGTACTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTTACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGG]
consensusID : consensus_9364#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence
[ATCGCCGAGGNNGACGTGTTTGGTCGTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGT]
[+] EMBL AL930692 [ATCGCCGAGGNNGACGTGTTTGGTCGTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9364#1 -----------------CCGGCTGAAAGGACGTGT--CTGTT-CGTTCGGTGCACTCAT- 39
consensus_9364#3 ----------------ATCGCCGAGGNNGACGTGT--TTGGT-CGT-CGGTGCACTCAT- 39
consensus_9364#0 CCGCCCACGCGTCCGCCCCCGCTGAAAGGACGTGT--CTGGTTCGTTCGGTGCACTCAT- 57
consensus_9364#2 -----CCGGGCCTGATAAAGTGTAAAGTGACTTGCAATTGTTAGGATTAGCATAGAAATA 55
*** ** ** * * * * **
consensus_9364#1 TGTGTTTTTATTGTGTGTCTA--TTGTTATTAAACGTTATCATTCTTAACTAAACCTGTG 97
consensus_9364#3 TGTGTTTTTATTGTGTGTCTA--T-GTTATTAAACGTTATCATTTTTAACTAAACCTGTG 96
consensus_9364#0 TGTGTTTTTATTGTGTGTCTA--TTGTTATTAAACGTTATCATTCTTAACTAAACCTGTG 115
consensus_9364#2 TGTCAAGGAGATACACGATTGATTAGGTGTTCAGGAGCGGCTCAGTTTCCGGATACTTTG 115
*** * * * * * * ** * * ** * * ** **
consensus_9364#1 TGTTAGGTACGCACCACC--CAGAAGAAAAAAAAA-GTTGACTGCACAAAGTGTATGCAA 154
consensus_9364#3 TGTTAGGTACGCACCACC--CAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAA 154
consensus_9364#0 TGTTAGGTACGCACCACC--CAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAA 173
consensus_9364#2 C-CCAAGCAATCATCACCGTCTGAAGGATTTATAAAGCCAACTCTCCCACGGAGATGCGG 174
* * * ** **** * **** * * ** * *** * * * ****
consensus_9364#1 GATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCG-TAGCAT 213
consensus_9364#3 GATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCG-TAGCAT 213
consensus_9364#0 GATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCG-TAGCAT 232
consensus_9364#2 GACATTGC--GGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGG 232
** * * * * * * * *** *** ** ** *
consensus_9364#1 GCGGTGTACGGTAGA-GAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTC 272
consensus_9364#3 GCGGTGTACGGTAGA-GAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTC 272
consensus_9364#0 GCGGTGTACGGTAGA-GAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTC 291
consensus_9364#2 CCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGG-ACTCTCCAACTTCCTCTACTACGTC 291
** * * * ** **** * * ** ** ** * ** ** ***
consensus_9364#1 ATCATTTTGCA--AACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATG 330
consensus_9364#3 ATCATTTTGCA--AACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATG 330
consensus_9364#0 ATCATTTTGCA--AACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATG 349
consensus_9364#2 AGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAATGGTGGCAAG 351
* * * * * * ** ** * *** * * ** * **** * *
consensus_9364#1 TAACCAAA----GATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGT----TGCTAATT 382
consensus_9364#3 TAACCAAA----GATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGT----TGCTAATT 382
consensus_9364#0 TAACCAAA----GATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGT----TGCTAATT 401
consensus_9364#2 AAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCATCGGATCACCATACCGCGACAAAG 411
** * * * ** *** * ** * * * * * * **
consensus_9364#1 GTTTAAACAAAT-TATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTG 441
consensus_9364#3 GTTTAAACAAAT-TATAAATCGCCATCGT------------------------------- 410
consensus_9364#0 GTTTAAACAAAT-TATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTG 460
consensus_9364#2 ACGGCAACAAAGGCACGAAATGGAA--GCAAGCGGGCACGAAAGGATAGTGGCGCCAGTT 469
****** * ** * *
consensus_9364#1 TGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAG 501
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 TGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAG 520
consensus_9364#2 TGCTAGAACCGAAGGAGGTACTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGC 529
consensus_9364#1 TAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGC-------------- 547
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 TAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGC 580
consensus_9364#2 TGGAAACGATGCTTACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCC 589
consensus_9364#1 ---------------------------------------------------ACACACACA 556
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 GACGCAACGCGACGCTAGTGACGTCTTGGCTGAGCGGATTTTTTTTATTTGAAGCACACA 640
consensus_9364#2 CGAAACTGCACGG----------------------------------------------- 602
consensus_9364#1 CACACATACCCGCGTCGCTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGC 616
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 CACACATACCCGCGTCGGTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGC 700
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGC 676
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 ATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGC 760
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 CAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGT 736
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 CAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGT 820
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 GCGCCAGAAAGGTATACCGAATCACCCATCCGAACATCCGAACTTCAGGCTTAGTGGNGT 796
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 GCGCCAGAAAGGAA--CCGAATCACCCATCCGAACATCCGAACTTCGGGCTTAGTGGTGT 878
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 GACATTTTTGGNGCACATACGGNGATTAGTAG---------------------------- 828
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 GACATTTTTGGTGCACATACGGTGATTAGTAGCTCATCCNGCACGCAGTGAAAGATTCTA 938
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 CGCGAAGCAGCAGCACAGGAGAGATACAGCAGCAACATGAATAACCTGATTGCGAAGGCC 998
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 AACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGT 1058
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 GCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCC 1118
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 AACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAAC 1178
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 AACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCAACG 1238
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 GATCACCATACCGTGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGA 1298
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 AAGGATAGTGGCGCCAGTTTGCTAGAACCAAAGGAGGTGCTGCTAAGAATTTACGGTCAA 1358
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 ACGCACGGGGAACATGCGCTGGAAACGATGCTCACCGAATCGGTCGTGTTTACGCTGCTG 1418
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 AGCGAGCGCAAGCTTGGCCCGAAACTGCACGGCATCTTTCCGGGCGGCCGCATCGAACAG 1478
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 ------------------------------------------------------------
consensus_9364#3 ------------------------------------------------------------
consensus_9364#0 TACATACCGGCCCGGGCCCTGCTGACGGCGGAGCTGAGCGATGCAAAGATATCGATAAAG 1538
consensus_9364#2 ------------------------------------------------------------
consensus_9364#1 -------------------------------
consensus_9364#3 -------------------------------
consensus_9364#0 GTAGCGGAAAAGATGGCCGCCATCCACAGTA 1569
consensus_9364#2 -------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||