cluster # 9377

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Anopheles gambiae
cluster # 9377 cluster # 9377 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9377#0 length = 1428 sequences # 9
consensus_9377#1 length = 998 sequences # 5

consensus_9377#2 length = 638 sequences # 1
consensus_9377#3 length = 403 sequences # 1

consensusID : consensus_9377#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1428
fasta sequence

                              [CCGCCCACGCGTCCG-GCGTGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAGCGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT-AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGAC-GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC-GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCAACTTGTACATACATTACTGATTTGTTGAGAAAAAAAAAAAAAAAAAAA]

[+] EMBL BM579836             [CCGCCCACGCGTCCG GCGTGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAGCGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAAGTGCTGCACGAGGTGACGAACCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM656080             [            CCGAGCGTGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM603015             [                                                                       ccgGAAACGAGAGTTTGTGTTTTCCCCTATTAAGTTTCCCATTCCACGTCGCTGTCTGAGTGAAAATGCGCGAAAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGTTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCATGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGATGCAGAAGCGGGACCGGCAGCGGAACAGCATGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX628925             [                                                                                                          TTCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAAGTGCTGCACGAGGTGACGAACCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS095ZS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                CACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGTTTTTTTTCGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCAACTTGTACATACATTACTGATTTGTTGAGAAA                ]
[-] EMBL CNS09AT5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AAACGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCAACTTGT                                          ]
[+] EMBL BM632715             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATTTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTCGTGACGGGGTGCGAGGAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGTCAGCTGGTTGCACCGAACGAGTACCCGATCGAGTCGGTGCTGGTTGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACGCGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGG                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08VQ8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGTGTTTGAAAACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACTTTTGGCGCATCCCGTCCGGCCACTGTAAGGTGCTGCCCGGGCACAAGGCACGCACCGAATCGGCCGGGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGGTCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGAACGGTCGGGAACAAGGAGAACATAAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGGCAGCCTGTACCTTATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGTTTTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGTTACTTGTACATACAT                                  ]
[-] EMBL CNS08PDS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGAAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGTTCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGCGGGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCTACTTGTACATACATTATTGATTTGTTGTGAAAAAAAAAAAAAAAAAAA]




>consensus_9377#0
CCGCCCACGCGTCCGGCGTGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTT
TTAGTTTCGTTGTGAAACGAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATC
GCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTG
GGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGAC
GCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAGCGGGACCGGCAGCG
GAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAA
CACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGC
GGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTG
ACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCG
ACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTG
TGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTG
ATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAG
GTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGG
CTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCG
CTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGAC
CAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGATGGGCCCG
GGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTG
GACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACG
ATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGC
ATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGG
ATAAAGGGCTGGGACTTCCGGAGCGGCGCGAAACGGTTCACCCTCGACGGGCACACGAAC
GACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGAC
TGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCA
ACTTGTACATACATTACTGATTTGTTGAGAAAAAAAAAAAAAAAAAAA

consensusID : consensus_9377#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 998
fasta sequence

                              [TCGCCGAGGTTTTACC-GGTTTGTTATTGTTATTGCTGTGCAGCGT-GTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAA-GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG-CAGAAACGGGACCGGCA-GCGGAACAG-CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCT-GGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGATGGGCCGGGTTTTTGGTGGGG]

[+] EMBL AL696404             [TCGCCGAGGTTTTACC GGTTTGTTATTGTTATTGCTGTGCAGCGT GTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTA TTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCG CCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCCAGAAGCGGGACCGGCAGGCGGAACAGCCACGCCCTTCG CGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCA CCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAAGTGCTGCACGAGGTGACGAACCATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS095ZR             [          gTTACCAGGTTTGTTATTGTTATTGCTGTGCAGCGT GTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAA GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAGACACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCAAAAAAAAAAAGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCT GGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGATGGGCCGGGTTTTTGGTGGGG]
[+] EMBL CNS09AT4             [                              TATTGCTGTGCAGCGTGGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAA GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAG CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCT GGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGG                                                ]
[+] EMBL CNS08PDR             [                                                                             CAG TTGGTTTTTAGTTTCGTTGTGAAA GAGAGTATGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAG CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTTAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGC                                                                                                                                        ]
[+] EMBL CNS08VQ7             [                                                                                                GTTGTGAAC GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGAGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAG CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGA                     ]




>consensus_9377#1
TCGCCGAGGTTTTACCGGTTTGTTATTGTTATTGCTGTGCAGCGTGTACCGCATGGTATT
CCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAAGAGAGTTTGTATTTTCC
CCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCC
CCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGT
GGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCT
GGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGA
CGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCC
CACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACG
CACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTT
CAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAA
GGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCG
CTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTG
GCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGC
CGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCT
GTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGA
GAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGA
CGGCAGCCTGTACCTGATGGGCCGGGTTTTTGGTGGGG

consensusID : consensus_9377#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 638
fasta sequence

                              [AGAATCCCCGAGGTTAAATGACGTAAGAGCTGGATGCANCAAGCGGGACCGGCAGCGGAACAGCATGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGTACTGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTANCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGCTGCTGCACNAGGTGACGAATCATTCCGACTCGGTGTGTGGCGGTGGGCTTCAGCTACGATGGCAGACTTTGTCGACGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGATGCCAAAACTTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGACGCGAACGATGCGTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGCAGGTGGACAGTACGGTCGGGCA]

[+] EMBL AL933334             [AGAATCCCCGAGGTTAAATGACGTAAGAGCTGGATGCANCAAGCGGGACCGGCAGCGGAACAGCATGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGTACTGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTANCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGCTGCTGCACNAGGTGACGAATCATTCCGACTCGGTGTGTGGCGGTGGGCTTCAGCTACGATGGCAGACTTTGTCGACGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGATGCCAAAACTTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGACGCGAACGATGCGTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGCAGGTGGACAGTACGGTCGGGCA]




>consensus_9377#2
AGAATCCCCGAGGTTAAATGACGTAAGAGCTGGATGCANCAAGCGGGACCGGCAGCGGAA
CAGCATGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGTACTGTTCACCAAAC
ACACCGCGCCGGTGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTANCCGTTACCGGCG
GTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGCTGCTGCACNAGGTG
ACGAATCATTCCGACTCGGTGTGTGGCGGTGGGCTTCAGCTACGATGGCAGACTTTGTCG
ACGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGATGCCAAAACTTATCGCC
AGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGACGCGAAC
GATGCGTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCG
ACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACG
GCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGG
GCACGCCGCTGCTGGCAGGTGGACAGTACGGTCGGGCA

consensusID : consensus_9377#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 403
fasta sequence

                              [ATCGCCCCGAGGTGGTTTTTAGTTCGCTGTGAAACGAGAGTTTGTATTTTCCCCTATTAAGTTTCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTG]

[+] EMBL AL930593             [ATCGCCCCGAGGTGGTTTTTAGTTCGCTGTGAAACGAGAGTTTGTATTTTCCCCTATTAAGTTTCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTG]




>consensus_9377#3
ATCGCCCCGAGGTGGTTTTTAGTTCGCTGTGAAACGAGAGTTTGTATTTTCCCCTATTAA
GTTTCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCAC
CGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATG
CCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAG
AAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAA
AGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAG
AGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9377#0      --------------------------CCGCCCACGCGTCCGGCGTGTACCGCATGGTATT 34
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      TCGCCGAGGTTTTACCGGTTTGTTATTGTTATTGCTGTGCAGCGTGTACCGCATGGTATT 60
consensus_9377#2      -----------------------------------------------AGAATCCCCGAGG 13
                                                                                  

consensus_9377#0      CCCTTCTCGCAAAAGCAGTTTGGTTTTTAGT----TTCGTTGTGAAACGAGAG----TTT 86
consensus_9377#3      ---ATCGCCCCGAGG-----TGGTTTTTAGT----T-CGCTGTGAAACGAGAG----TTT 43
consensus_9377#1      CCCTTCTCGCAAAAGCAGTTTGGTTTTTAGT----TTCGTTGTGAAA-GAGAG----TTT 111
consensus_9377#2      TTAAATGACGTAAGAGCTGGATGCANCAAGCGGGACCGGCAGCGGAACAGCATGCCCTTC 73
                                  *         *     **        *  * * **    *     ** 

consensus_9377#0      GTATTTTCCCCCATTAAGTT--TCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAG 144
consensus_9377#3      GTATTTTCCCCTATTAAGTT--TCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAG 101
consensus_9377#1      GTATTTTCCCCCATTAAGTT--TCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAA 169
consensus_9377#2      GCCGTTCGCCCGTACAGGACGATGCAAAGCTGTACTGTTCACCAAAC-ACACCGCGCCGG 132
                      *   **  ***    * *    * *    *   *  * *  *  *   * *  ****   

consensus_9377#0      AATAC-GCCGCCCCGTTCACCG-ATGGACGAGCTGGTGG---------GGGAAGATGACG 193
consensus_9377#3      AATAC-GCCGCCCCGTTCACCG-ATGGACGAGCTGGTGG---------GGGAAGATGACG 150
consensus_9377#1      AACAC-GCCGCCCCGCTCACCG-ATGGACGAGCTGGTGG---------GGGAAGATGACG 218
consensus_9377#2      TGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTANCCGTTACCGGCGGTGAGGATGACA 192
                          * *  ** *   *****  * *** *****    *         * ** ****** 

consensus_9377#0      ACG---ACGAGGAGCTGATTTACGTGGGCGATGCCG----ATGAGGTGCTGGACGCTTGG 246
consensus_9377#3      ACG---ACGAGGAGCTGATTTACGTGGGCGATGCCG----ATGAGGTGCTGGACGCTTGG 203
consensus_9377#1      ACG---ACGAGGAGCTGATTTACGTGGGCGATGCCG----ATGAGGTGCTGGACGCTTGG 271
consensus_9377#2      AAGCGTACGTGTGGCACATACGCACCGGCGAGGCTGCTGCACNAGGTGACGAATCATTCC 252
                      * *   *** *  **  **   *   ***** ** *    *  *****  * *   **  

consensus_9377#0      GAGCAGGAG-GAAGCGGAAGACGAAGAGCTGGACGCAGAAGCGGGACCGGCAGCGGAACA 305
consensus_9377#3      GAGCAGGAG-GAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACA 262
consensus_9377#1      GAGCAGGAG-GAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACA 330
consensus_9377#2      GACTCGGTGTGTGGCGGTGGGCTTC-AGCTACGATGGCAGACTTTGTCGACGACCGG-CG 310
                      **   ** * *  ****  * *    ****        *  *     ** *  * *  * 

consensus_9377#0      GCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGC-AAAGCTGACGTTCACC-----AA 359
consensus_9377#3      GCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGC-AAAGCTGACGTTCACC-----AA 316
consensus_9377#1      GCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGC-AAAGCTGACGTTCACC-----AA 384
consensus_9377#2      ATATGGCCGGCTACATACAGGTGTTCAAGGTGATGCCAAAACTTATCGCCAGGTGTGGGA 370
                        * * **  *  * * *    ** ** *  ***** *** ** *    **        *

consensus_9377#0      ACACACCGCGC-CGGTGTTCTGTGG-CGCCCTT---CACCCCACGGAAGAGCTG-GCCGT 413
consensus_9377#3      ACACACCGCGC-CGGTGTTCTGTGG-CGCCCTT---CACCCCACGGAAGAGCTG-GCCGT 370
consensus_9377#1      ACACACCGCGC-CGGTGTTCTGTGG-CGCCCTT---CACCCCACGGAAGAGCTA-GCCGT 438
consensus_9377#2      GTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGACGCGAACGATGCGTGAT 430
                          **** *  ** * *   ****  ** **    ***   ***  *  * *  *   *

consensus_9377#0      TACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCA 473
consensus_9377#3      TACCGGCGGTGAGGATGACAAAGCGTACGTGTG--------------------------- 403
consensus_9377#1      TACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCA 498
consensus_9377#2      GGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGT 490
                        * *** * ****  * * * * *********                           

consensus_9377#0      CGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTT 533
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      CGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTT 558
consensus_9377#2      GCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCT 550
                                                                                  

consensus_9377#0      TGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCG 593
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      TGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCG 618
consensus_9377#2      GCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCT 610
                                                                                  

consensus_9377#0      CCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAA 653
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      CCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAA 678
consensus_9377#2      GCTGGCAGGTGGACAGTACGGTCGGGCA-------------------------------- 638
                                                                                  

consensus_9377#0      CGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGA 713
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      CGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGA 738
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      CTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGG 773
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      CTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGG 798
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      CAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGG 833
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      CAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGG 858
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      CACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGC 893
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      CACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGC 918
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      CGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGAT 953
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      CGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGAT 978
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      GGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGT 1013
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      GGGCCGGGTTTTTGGTGGGG---------------------------------------- 998
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      GCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAA 1073
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      ------------------------------------------------------------
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      GCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCC 1133
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      ------------------------------------------------------------
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      GAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGG 1193
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      ------------------------------------------------------------
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      CGGTTGGATAAAGGGCTGGGACTTCCGGAGCGGCGCGAAACGGTTCACCCTCGACGGGCA 1253
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      ------------------------------------------------------------
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      CACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTC 1313
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      ------------------------------------------------------------
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      GGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGAC 1373
consensus_9377#3      ------------------------------------------------------------
consensus_9377#1      ------------------------------------------------------------
consensus_9377#2      ------------------------------------------------------------
                                                                                  

consensus_9377#0      AACTGCAACTTGTACATACATTACTGATTTGTTGAGAAAAAAAAAAAAAAAAAAA 1428
consensus_9377#3      -------------------------------------------------------
consensus_9377#1      -------------------------------------------------------
consensus_9377#2      -------------------------------------------------------