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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9378#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2524 fasta sequence
[CCGAGCTGAGCAAGTTCGAGACGGAGCACTCGATCAGCTTCATCCCGCCGGACGGTGAGTTCGAGCTGATGCGCTACCGCACCACCAAGGACATCTCGCTGCCATTCCGGGTGATCCCGCTGGTGCGGGAGGTCGGCCGGACCAAGATGGAGGTGAAGGTGGTGCTCAAGTCGAACTTCAAGCCGTCGCTGCTCGGGCAGAAGATTGAGGTGAAGATACCG-CGCCGCTGAACACGTCCGGCGTGCAGCTGATCTGCCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGTATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA-CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA-TTTCAAGCCCTCACACACACACACACA-C---CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG-AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCA--GCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGTGCTTGTATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAAGGGTGGGAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGGAAATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA-TTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATGTTTAAAAAAATTATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAACCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAATGGAGAAAAACTAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACACCTACACAAACCTACAGACAAACAAACACATACACCAGCATATGC]
[+] EMBL BM632046 [CCGAGCTGAGCAAGTTCGAGACGGAGCACTCGATCAGCTTCATCCCGCCGGACGGTGAGTTCGAGCTGATGCGCTACCGCACCACCAAGGACATCTCGCTGCCATTCCGGGTGATCCCGCTGGTGCGGGAGGTCGGCCGGACCAAGATGGAGGTGAAGGTGGTGCTCAAGTCGAACTTCAAGCCGTCGCTGCTCGGGCAGAAGATTGAGGTGAAGATACCGACGCCGCTGAACACGTCCGGCGTGCAGCTGATCTGCCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGTATGGAAAATTAAACGTATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCATTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGTTGCTAAGACACAAACCCCGCAAAGGAATGACTCCCAATACGCCTC AGATTCTGTTGCTCTTCTTATTATACAAATTTTCAAG ]
[+] EMBL BM609974 [ CCG CGCCGCTGAACACGTCCGGCGTGCAGCTGATCTGTCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGTATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACA CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTT ]
[+] EMBL BM608081 [ ccgATGCGATCGTATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACA CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGACAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAAGTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCC ]
[+] EMBL BM604263 [ ccgATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACA CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGACAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAAGTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAGAAAAGCGTTAAGCAGCGGGGCGGTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTC ]
[+] EMBL BM607590 [ ccGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCATTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGTTGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTC AGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACA CACACCCCTA ]
[+] EMBL BM647754 [ cCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACATC CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAG ]
[+] EMBL BM625821 [ ccGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACATC CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCTATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCA GCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGGTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATA ]
[+] EMBL BM582247 [ ccgGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACATC CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCA GCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTAT ]
[+] EMBL BM575570 [ ccGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCAGCGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGTGCTTGTATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAAGGGTGGGAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGGAAATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATC ]
[+] EMBL BX618216 [ ACCAACTGGAGCTGTGCCGAATTTATTGCTTCTG TATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA TTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAATCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATGTTTAAAAAAATTATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAACCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAAT ]
[+] EMBL BX624955 [ CCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA TTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTAT ]
[+] EMBL BM582088 [ ccGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAAGTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATG GAAGTAAAATT AACAAAAAGGGCAAGGCATTTCTGTTGAACGGAGTGTTACAAACGTATGGTTTAGGACGCGATAACTATAGGTTC TTTTTTTTGTGCGGTACAGAAACATGTAAACACGATTAAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTACTTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATGTTTAAAAAAA TATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAACCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAATGGAGAAAAACTAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACACCTACACAAACCTACAGACAAACAAACACATACACCAGCATATGC]
[+] EMBL AGA282851 [ AATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAAGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA TTTTGTGTTTTGTTTGCACCATTGCATATAAAAATTAACATATAAAAGCCTCCTCAAGAACAAC ]
consensusID : consensus_9378#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1055 fasta sequence
[CCGCCCACGCGTCCGGGCGATACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGGTGCTTGCATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAGGGTGGAGCTAAAGGATTAGTTAGAAGTGGCATTGCGTGCTGTAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGTATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATT]
[+] EMBL BM650828 [CCGCCCACGCGTCCGGGCGATACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGGTGCTTGCATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCG ]
[+] EMBL BX619057 [ CGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAGGGTGGAGCTAAAGGATTAGTTAGAAGTGGCATTGCGTGCTGTAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGTATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATT]
consensusID : consensus_9378#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence
[AAACAATACTGATATTCAATTATCGAAGTTACTGGAGAAACACAAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACCTACAGACAATCAAACACATACACAAGCATATGCTATAAATATATATAAATATAGTGAAAGGTGAACACAACATCATGAAAAACACACAAAATGACACCGTTGATAAGAATATAATAATATGACATGAATAATAATATTATTATTGCGTAAACTATTAAGATGATAAACTTAGTTGTTGAAAACAGAAGAAAGTAAAAGTCGATGAAAGTGAAAAAAAACGAAAAAAAA]
[-] EMBL AGA281229 [AAACAATACTGATATTCAATTATCGAAGTTACTGGAGAAACACAAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACCTACAGACAATCAAACACATACACAAGCATATGCTATAAATATATATAAATATAGTGAAAGGTGAACACAACATCATGAAAAACACACAAAATGACACCGTTGATAAGAATATAATAATATGACATGAATAATAATATTATTATTGCGTAAACTATTAAGATGATAAACTTAGTTGTTGAAAACAGAAGAAAGTAAAAGTCGATGAAAGTGAAAAAAAACGAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9378#0 CCGAGCTGAGCAAGTTCGAGACGGAGCACTCGATCAGCTTCATCCCGCCGGACGGTGAGT 60
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TCGAGCTGATGCGCTACCGCACCACCAAGGACATCTCGCTGCCATTCCGGGTGATCCCGC 120
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TGGTGCGGGAGGTCGGCCGGACCAAGATGGAGGTGAAGGTGGTGCTCAAGTCGAACTTCA 180
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 AGCCGTCGCTGCTCGGGCAGAAGATTGAGGTGAAGATACCGCGCCGCTGAACACGTCCGG 240
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CGTGCAGCTGATCTGCCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGT 300
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACT 360
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 GCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGT 420
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAA 480
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGA 540
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 AACGCGATGCTAAGACACAAACCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCT 600
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 GTTGCTCTTCTTATTATACAAATTTCAAGCCCTCACACACACACACACACCCCCTATCCC 660
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTG 720
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTC 780
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTG 840
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGA 900
consensus_9378#1 -----------------------------------CCGCCCACGCGTCCG-----GGCGA 20
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACA 960
consensus_9378#1 TACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACA 80
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGC 1020
consensus_9378#1 ATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGC 140
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGC 1080
consensus_9378#1 CGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGC 200
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 AACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGAT 1140
consensus_9378#1 AACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGAT 260
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 GCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAG 1200
consensus_9378#1 GCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAG 320
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCAT 1260
consensus_9378#1 ACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCAT 380
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCG-TGCTTGTATTCGGAAGCCGC 1319
consensus_9378#1 ACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGGTGCTTGCATTCGGAAGCCGC 440
consensus_9378#2 ----------------------------------AAACAATACTGATATTCAATTATCGA 26
* * ** **** **
consensus_9378#0 GAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAAC 1379
consensus_9378#1 GAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAAC 500
consensus_9378#2 AGTTACTGGAGAAACACAAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAAC 86
* * ** * * * * *** * *** * * * ***
consensus_9378#0 AAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTG 1439
consensus_9378#1 AAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTG 560
consensus_9378#2 GAAATGCAAAAGC---ACATACCTACAGACAATCAAACACATACACAAGCATATGCTATA 143
*** ** ** ** **** * * * * ** ** * * * *
consensus_9378#0 --CGCTCGGGAGTGTAGCGGAGAG--ACCTCTAGTAGACGTAGTACGGACAAATTTCCGA 1495
consensus_9378#1 --CGCTCGGGAGTGTAGCGGAGAG--ACCTCTAGTAGACGTAGTACGGACAAATTTCCGA 616
consensus_9378#2 AATATATATAAATATAGTGAAAGGTGAACACAACATCATGAAAAACACACAAAAT---GA 200
* * *** * * * * * * * * * * ** ***** * **
consensus_9378#0 CTCCGGCACTAAAAA-GCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAG 1554
consensus_9378#1 CTCCGGCACTAAAAA-GCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAG 675
consensus_9378#2 CACCGTTGATAAGAATATAATAATATGACATGAATAATAATATTA-TTATTGCGTAA-AC 258
* *** *** ** * *** ** *** * * ** * *** **** *
consensus_9378#0 GAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGA-GTTAGA 1613
consensus_9378#1 GAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGA-GTTAGA 734
consensus_9378#2 TATTAAGATGATAAACTTAGTT---GTTGAAAACAGAAGAAAGTAAAAGTCGATGAAAGT 315
* ** *** * * * * * * ** *** * * *** * ** * **
consensus_9378#0 GAAGAAAGGGTGGG-----------------------------------AGTGCGTGTAC 1638
consensus_9378#1 GAAGAAGGGTGGAGCTAAAGGATTAGTTAGAAGTGGCATTGCGTGCTGTAGTGCGTGTAC 794
consensus_9378#2 GAAAAAAAACGAAAAAAAA----------------------------------------- 334
*** **
consensus_9378#0 AACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCA 1698
consensus_9378#1 AACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCA 854
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGGAAATATATGTATGTTCCCCT 1758
consensus_9378#1 CATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGTA--TATATGTATGTTCCCCT 912
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGC 1818
consensus_9378#1 ATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGC 972
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAAC 1878
consensus_9378#1 TACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAAC 1032
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTG 1938
consensus_9378#1 ATTTCACTACTGTATGCTGAATT------------------------------------- 1055
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATG 1998
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGT 2058
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAA 2118
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTA 2178
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 AAAATGATTATTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCC 2238
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATG 2298
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 TTTAAAAAAATTATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAA 2358
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 CCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAATGGAGAAAAACTA 2418
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 AAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATAC 2478
consensus_9378#1 ------------------------------------------------------------
consensus_9378#2 ------------------------------------------------------------
consensus_9378#0 ACCTACACAAACCTACAGACAAACAAACACATACACCAGCATATGC 2524
consensus_9378#1 ----------------------------------------------
consensus_9378#2 ----------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||