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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9380#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1772 fasta sequence
[CCTACTGGAAATACTGGTTTGAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG-AAAAAAAAAACTCCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACTTTCACAGAATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG-AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATAAAAAAAAAAAGAACTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTACTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCAATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCCCTTGAAATGTTGGTCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACGCCAGCCCTCATAACAAATCCCTGCCATTGACGACTTGACAGTAGGCATCGGTGAATGACATTTGAGCGCACAGCGCCATCTGCACGTCAAAAATACAACCATCAGTCGATTTGAATGATTGTAATTTAAATTAGCCGTTTTCAATCCATGGGGCAAACAAACGGGAAAATTACTAGAGTACATTTCATTTTGTAAAATCAAAAAAAA]
[+] EMBL CNS0920Y [CCTACTGGAAAAAGCAGTTTGAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG AAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATAGTCCAATTACTTTCACAGCATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACTCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGA ]
[+] EMBL CNS08L8J [ TACTGGTTTGAAATTAACACGGTTTGCGGCA GATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAAACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAAAAGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTAATGACGGATGCGC ]
[+] EMBL CNS09DRA [ TACTGG AAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG AAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATAGTCCAATTACTTTCACAGCATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTC ]
[+] EMBL CNS09AY9 [ TGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG AAAAAAAAAACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTAATGACGGATGCGCTAAACTACACG AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACATGCACATGCAG ]
[+] EMBL BX605370 [ CAGCAGCAGCAAAG AAAAAAAAAACTCCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCCAACATCGTCCGATTACTTTCACAGAATGTCTCGGAAAACGTACTCCTCGGTAGAATGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATTATCAACGAGAAAGTTTACGCAAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCATCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACACCGGAATACGTGAACCCATACCGAGAGGGAGCACAAC ]
[-] EMBL CNS09AYA [ ACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAAATCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCCACTGGCGCACCCTAATGACGGATGCGCTAAACTACACG AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTTACTGTCACCCGCCAAGACAGAACTGTAAAAGTACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTA ]
[+] EMBL BX623132 [ AATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCCAACATCGTCCGATTACTTTCACAGAATGTCTCGGAAAACGTACTCCTCGGTAGAATGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATTATCAACGAGAAAGTTTACGCAAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCATCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACACCGGAATACGTGAACCCATACCGAGAGGGAGCACAACAGACGGAATCTACCAAGC ]
[-] EMBL CNS08Y6A [ AAGTACCGGAGCTCGATCTGGTTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAAT CTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCAACTGGCGCACCCTAATGACGGATGCGCTAAACTACACG AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGAACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCT ]
[-] EMBL CNS0920Z [ AATCAACGAGAAAGTTTACTCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTACCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCCCTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATAAAAAAAAAAA ]
[-] EMBL CNS09DRB [ GCATACTTAAGGGCGTTTCCTACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCGTCGAACTGCTTGGGCTGTTTAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTTCCGAGAGGGAGCACTACAGACGGATTTTACCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCCCTGTCACCCGCCAAGACAGAACTGTAAAAGAAAACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATA ]
[-] EMBL CNS08L8K [ aataAAGGGCGTTTCCAACTGGCGCACCCTAATGACGGATGCGCTAAACTACACGCAAAACGTTCGTGAAAATTTTAGACGAGAAATCCGTCGGACTGCTTGGGCTGCTAAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGGGCACCACAGACGGATTCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTAACTGTCACCCGCCAAGACAGGACTGTAAAAGGAAACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATAAAAAAAAAAAGAA ]
[-] EMBL BX621628 [ AATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATATAACCTTATCGCCCTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTACTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCAATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCCCTTGAAATGTTGGTCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACGCCAGCCCT ]
[-] EMBL AGA280311 [ TCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACGCCAGCTATCATAACAAATCCCTGCCATTGACGACTTGACAGTAGGCATCGGTGAATGACATTTGAGCGCACAGCGCCATCTGCACGTCAAAAATACAACCATCAGTCGATTTGAATGATTGTAATTTAAATTAGCCGTTTTCAATCCATGGGGCAAACAAACGGGAAAATTACTAGAGTACATTTCATTTTGTAAAATCAAAAAAAA]
consensusID : consensus_9380#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 730 fasta sequence
[CCGCCCACGCGTCCGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTTCCACAACCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTG-GCGCACCCTCATGACGGATGCGCTGAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAAAGTTTTAATTAG]
[+] EMBL BM593641 [CCGCCCACGCGTCCGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTTCCACAACCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTG GCGCACCCTCATGACGGATGCGCTGAACTA ]
[+] EMBL CNS08Y69 [ cacaCGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGCGCGCACCCTAATGACGGATGCGCTAAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAAAGTTTTAATTAG]
consensusID : consensus_9380#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[GGGGGGGTGGGCGGTTGTAGAAAATGATTNTNGGTNTTNAGTNTANATATACGCTTATGAGGAATTGGACGATATNACCTTATCGCCCTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTAGCTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCNATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCACCTTGAAATGTTGGTCCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACNAACCTCGGGGGAT]
[-] EMBL AL694902 [GGGGGGGTGGGCGGTTGTAGAAAATGATTNTNGGTNTTNAGTNTANATATACGCTTATGAGGAATTGGACGATATNACCTTATCGCCCTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTAGCTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCNATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCACCTTGAAATGTTGGTCCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACNAACCTCGGGGGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9380#0 CCTACTGGAAATACTGGTTTGAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAG 60
consensus_9380#1 ----------------CCGCCCACGCGTC-CGGTTTGCGGCACGATCATAAACAGTGCAG 43
consensus_9380#2 ------------------GGGGGGGTGGGCGGTTGTAGAAAATGATTNTNGGTNTTNAGT 42
* * * * * *** * *
consensus_9380#0 CAGCAGCAAAGAAAAAAAAAACTCCTAAATTATCGTATCACCACCATCGTTAGGGTTTAA 120
consensus_9380#1 CAGCAGCAAAGAAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAA 103
consensus_9380#2 NTANATATACGCTTATGAGGAATTGGACGATATNACCTTATCGCCCTAGCTCCGGCT-GT 101
* * * * * * * * *** * * * ** * * * ** *
consensus_9380#0 AAAGTGAAGCCAAACATCGTCCAATTACTTTCACAGAATGTCTCGGAAAAC-GTACTCCT 179
consensus_9380#1 AAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGTCTCGGAAAAC-GTACTCCT 162
consensus_9380#2 ACCGTGG-GCCGATTGACACGTGCTCTAGCTCGCGCATGGACGGTGCACCCAGCTGTCCC 160
* *** *** * * * ** * * * * * * * * ***
consensus_9380#0 CGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGT---TTTCCGGGC 236
consensus_9380#1 CGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGT---TTTCCGGGC 219
consensus_9380#2 ATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCG 220
**** * * * ** * ** ** * * * * * * **
consensus_9380#0 TGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGC 296
consensus_9380#1 TGGAGAAAAACACTTTTCCACAACCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGC 279
consensus_9380#2 CGCACCTGGCCACCCGTCT-TGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTC 279
* * *** * ** ** * * * * * * * * *
consensus_9380#0 TCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGG 356
consensus_9380#1 TCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGG 339
consensus_9380#2 CCNATCGACGCGCACGATTCGATCGTCCAACC-GCGT-ACCGTTGATGTATCGCATCGCA 337
* *** * * * ** * * ** * * * *** * * **
consensus_9380#0 AGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTAC- 415
consensus_9380#1 AGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTAC- 398
consensus_9380#2 CTTTCCGCGT-CTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCCT 396
* *** ***** ** * * * * * ** * *
consensus_9380#0 -AAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAA 474
consensus_9380#1 -AAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAA 457
consensus_9380#2 TGAATTTGTCCAGCCCCA---TAATGATGCGCCGCACATCA-CCGC-AGCGCGAAAACAG 451
** * * *** **** * * ** * **** ** * * **
consensus_9380#0 ACTGAGGGGCAACCAAATTACGGCC--GAATCGGAATTTCCCAAACTTCAGGAACTGATC 532
consensus_9380#1 ACTGAGGGGCAACCAAATTACGGCC--GAATCGGAATTTCCCAAACTTCAGGAACTGATC 515
consensus_9380#2 CTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGA 511
* ** * * ** **** * ** ** * * ****
consensus_9380#0 AATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTC 592
consensus_9380#1 AATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTC 575
consensus_9380#2 AACGCGCAGGAGCT-TTTCCTGTTCATGCCGGGA-GCACCTTGAAATGTTGGTCCCCTGT 569
** **** ** * **** * * ** * * * ** *** * * * **
consensus_9380#0 CCGGACATGTCCTATCGCATACTGAA-GGGCGTTTCCGACTGGCGCACCCTCATGACGGA 651
consensus_9380#1 CCGGACATGTCCTATCGCATACTGAA-GGGCGTTTCCGACTGGCGCACCCTCATGACGGA 634
consensus_9380#2 ATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGG 629
** * * ** ** * * ** * * * * * * * * ***
consensus_9380#0 TGCGCTGAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCT 711
consensus_9380#1 TGCGCTGAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCT 694
consensus_9380#2 CCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACNAACCTCG 689
* * * * **** ** ** * * * *** * *** *
consensus_9380#0 TGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTA 771
consensus_9380#1 TGGGCTGCTCAATCAAGAAATTAA--AGTTTTAATTAG---------------------- 730
consensus_9380#2 GGGGAT------------------------------------------------------ 695
*** *
consensus_9380#0 CCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACC 831
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 GAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACAT 891
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 GCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGA 951
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 ATTTACAATAAAAAAAAAAAGAACTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGC 1011
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 TCTACTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGC 1071
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 CCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCC 1131
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 GTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCAATCGACGCGCACGATTCGATCGT 1191
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 CCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACT 1251
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 CGACGAAGCAGAAGCCGCACGGTGTCTTCTTGAATTTGTCCAGCCCCATAATGATGCGCC 1311
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 GCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAA 1371
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 GATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGC 1431
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 CCTTGAAATGTTGGTCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAA 1491
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 TTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATG 1551
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 CCGCAAAATGTACGCCAGCCCTCATAACAAATCCCTGCCATTGACGACTTGACAGTAGGC 1611
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 ATCGGTGAATGACATTTGAGCGCACAGCGCCATCTGCACGTCAAAAATACAACCATCAGT 1671
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 CGATTTGAATGATTGTAATTTAAATTAGCCGTTTTCAATCCATGGGGCAAACAAACGGGA 1731
consensus_9380#1 ------------------------------------------------------------
consensus_9380#2 ------------------------------------------------------------
consensus_9380#0 AAATTACTAGAGTACATTTCATTTTGTAAAATCAAAAAAAA 1772
consensus_9380#1 -----------------------------------------
consensus_9380#2 -----------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||