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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9383#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1896 fasta sequence
[GACCCACGCGTCCGCCTTTTTTTTTTTTTTTAGGTGTAGAAATTGTTGCAGTTCCTATCTTTATTATTCAAAAAAGGGAAATACGCA-TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCG-CCCCAGGTAGTAGAGGAAGCGGGCACACTCG-TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGTAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGG--GCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC-GGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGTGTGTGTTTTGTGCGAA]
[+] EMBL BM644420 [GACCCACGCGTCCGCCTTTTTTTTTTTTTTTAGGTGTAGAAATTGTTGCAGTTCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTG ]
[+] EMBL CNS08L6N [ ttttTAGAAATTGTTGCAGTGCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCTTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCGGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTTCGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGAACCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTTAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCCCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCG CCCCAGGT ]
[+] EMBL CNS08G3Y [ GTTGCAGTTCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGACCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCA ]
[+] EMBL CNS093T7 [ TCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTT ]
[+] EMBL CNS08NY0 [ TATTCAAAAAAGGGAAATACGCATTTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCG CCCCAGGTAGTAGAGGAAGCGGGCACACTCGTTTGTTGCTGGCCGTTTCCGGAAACACCGAC ]
[-] EMBL BM602186 [ ATCCAGACAGAACGATATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATTGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCTTGAGTAAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCGGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACAGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGTTGCTTGTGCGCCACACTGTACTCCAGCTTGGCCGCCTTGATGCG CCCCAGGTAGTAGAGGAAGCGGGCACACTCG TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGcgg ]
[+] EMBL BM646738 [ CCGGGCCGATCGAACGGATCGCCGTCTTAATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTGTACTCTAGCTTGGCCGCCTTGATGCG CCCCAGGTAGTAGAGGAAGCGGGCACACTCG TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGTAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGG ]
[-] EMBL CNS08NXZ [ CGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCCAGGTAGTAGAGGAAGCGGGCACACTCG TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGG GTCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC GGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTAT ]
[-] EMBL BX602143 [ GAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGGTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTAC ]
[-] EMBL CNS08L6M [ ggtggTTGGGCAGATGGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCA CTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG TCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC GGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGTGTGTGTTTTGTGCGAA]
[-] EMBL BM607084 [ TGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTCCGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGTGTGTGTTTTcgg ]
consensusID : consensus_9383#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 855 fasta sequence
[CGTCTGGCGGAATCCGACGGTGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCAGGTAGTAGAGGAAGCGGGCACACTCGTTGCTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCG-CAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTT-GTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG-TCCGCGTCTTTCTTT-GCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC-GGCTACGCTTATCCTTTTACGCTGCACTCCGAGATGTGCCG-CAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTATTCGCGATGCACGACGATGTGTTTACCGTCGGCGATTCTG]
[-] EMBL CNS08G3X [CGTCTGGCGGAATCCGACGGTGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCAGGTAGTAGAGGAAGCGGGCACACTCGTTGCTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCG CAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTT GTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG TCCGCGTCTTTCTTT GCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC GGCTACGCTTATCCTTTTACGCTGCACTCCGAGATGTGCCG CAGGGGGTTT ]
[-] EMBL CNS096GS [ CAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCG CAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTT GTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG TCCGCGTCTTTCTTT GCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA ]
[-] EMBL AL696334 [ cgtTCGAAAGCGAACGCAGCACGCGCCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGGTCGATCTGTCGGGCAT GTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGAT GGGTC GCT GGGC GCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTACGCTTATCC TTTACGCTGCACTCCGAGATGTGCCGCCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTATTCGCGATGCACGACGATGTGTTTACCGTCGGCGATTCTG]
consensusID : consensus_9383#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence
[GCCGCAATCAGATCCAGCGATCGCGGTTCTGCCCGACCACGCTTCGCCATCAGATCCTGNGAGCATTTGGTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTCACAAAGAGTAGCGAGATTATTTTAACCTCGGGNA]
[-] EMBL AL933775 [GCCGCAATCAGATCCAGCGATCGCGGTTCTGCCCGACCACGCTTCGCCATCAGATCCTGNGAGCATTTGGTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTCACAAAGAGTAGCGAGATTATTTTAACCTCGGGNA]
consensusID : consensus_9383#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence
[AATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATAAGATCCAGCGATATGCGGTTCTGTCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGGTCGCGTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGTTCTTGATGGCGGTGCGGGGACGGGGCAGCTCCGGCTCCTGCGCCCCGTCCGGATAGTCCTCGATGTACGCCATTATGCCGTCACGCTCCGGTCCGGCCGGGTACAGCTGCGCGGCCAGTGAGCGCACCACCACCAGCGCCAGCTTCCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCGCGTCCGCCTTGTCGCGGACGCGTGGGCGG]
[-] EMBL BM601327 [AATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATAAGATCCAGCGATATGCGGTTCTGTCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGGTCGCGTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGTTCTTGATGGCGGTGCGGGGACGGGGCAGCTCCGGCTCCTGCGCCCCGTCCGGATAGTCCTCGATGTACGCCATTATGCCGTCACGCTCCGGTCCGGCCGGGTACAGCTGCGCGGCCAGTGAGCGCACCACCACCAGCGCCAGCTTCCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCGCGTCCGCCTTGTCGCGGACGCGTGGGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GACCCACGCGTCCGCCTTTTTTTTTTTTTTTAGGTGTAGAAATTGTTGCAGTTCCTATCT 60
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 TTATTATTCAAAAAAGGGAAATACGCATTTTGCACGACGAACAAACCATTAAATGAACCT 120
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 ATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACAC 180
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGA 240
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 ATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTT 300
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCG 360
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCT 420
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGG 480
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGT 540
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACG 600
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCG 660
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 TGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCT 720
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCA 780
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGA 840
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 TCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCA 900
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCC 960
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CCAGGTAGTAGAGGAAGCGGGCACACTCGTTGTTGCTGGCCGTTTCCGGAAACACCGACT 1020
consensus_9383#1 ------------------------------------------------------------
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 TGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGTAGCAGAC 1080
consensus_9383#1 ----------------------------------------------------CGTCTGGC 8
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 AGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGG 1140
consensus_9383#1 GGAATCCGACGGTGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCG 68
consensus_9383#2 ------------------------------------------------------------
consensus_9383#3 ---------------------------AATCGTTGTTCAGTTCGGCCACCCGCGAGTGGT 33
consensus_9383#0 AGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGT 1200
consensus_9383#1 CGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCAGGTAGTAGAGGAAGCGGGCAC 128
consensus_9383#2 --------------GCCGCAATCAGATCCAGCGAT-CGCGGTTCTGCCCGACCACG-CTT 44
consensus_9383#3 AGAAGTAGCTCTTGGCCGCAATAAGATCCAGCGATATGCGGTTCTGTCCGACCAC--CTT 91
consensus_9383#0 AGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCAC--CTT 1258
consensus_9383#1 ACTCGTTGCTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGAT 188
**** ** ** *** * * * * ** * *
consensus_9383#2 CGC-CATCAGATCCTGNGAGCATTTG-GTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGG 102
consensus_9383#3 CGC-CATCAGATCCTGCGAGCATTTG-GTCGCGTTCGGCAGATCGTTCTTGTCCAGCAGG 149
consensus_9383#0 CGC-CATCAGATCCTGCGAGCATTTG-G--GCCTTCGGCAGATCGTTCTTGTCCAGCAGG 1314
consensus_9383#1 CGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCT 248
** ** * * ** * *** * ** * * **** * * **
consensus_9383#2 CGCA-----CCAGCAGCA---------GCAGATGGAAGTA--------AGCGTCCACCTC 140
consensus_9383#3 CGCA-----CCAGCAGCA---------GCAGATGGAAGTA--------AGCGTCCACCTC 187
consensus_9383#0 CGCA-----CCAGCAGCA---------GCAGATGGAAGTA--------AGCGTCCACCTC 1352
consensus_9383#1 CGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTT 308
** * * **** **** ** *** **** ** *
consensus_9383#2 CGGCACCGG-GCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGG 199
consensus_9383#3 CGGCACCGG-GTTCTTGATGGCGGTGCGGGGACGGGGCAGCTCCGGCTCCTGCGCCCCGT 246
consensus_9383#0 CGGCACCGG-GCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGG 1411
consensus_9383#1 CCAAATCGTTGTTCAGTTCGGCCACCCGCGAGT--GGTAGAAGTAGCTCTTG-GCCGCAA 365
* * ** * ** *** ** * ** ** **** ** ** *
consensus_9383#2 CCGGAT--AGTCCTCGATG----TACGCCATTAT----GCCATCACGCTCCGGTCCGGCC 249
consensus_9383#3 CCGGAT--AGTCCTCGATG----TACGCCATTAT----GCCGTCACGCTCCGGTCCGGCC 296
consensus_9383#0 CCGGAT--AGTCCTCGATG----TACGCCATTAT----GCCATCACGCTCCGGTCCGGCC 1461
consensus_9383#1 TCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCACGCTCCGGTCCGGCC 425
* *** ** *** * * * * * * *** ******************
consensus_9383#2 GGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTC 309
consensus_9383#3 GGGTACAGCTGCGCGGCCAGTGAGCGCACCACCACCAGCGCCAGCTTCCGGCGCGTCGTC 356
consensus_9383#0 GGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTC 1521
consensus_9383#1 GGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTC 485
************ ******* ************************** ************
consensus_9383#2 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCG 369
consensus_9383#3 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCGCGTCCGCCTTGTCG 416
consensus_9383#0 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCG 1581
consensus_9383#1 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCG 545
********************************************* ** ***********
consensus_9383#2 ATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCG 429
consensus_9383#3 ------CGGACGCGTGGGCGG--------------------------------------- 431
consensus_9383#0 ATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCG 1641
consensus_9383#1 ATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG-TCCGCGTCTTTCTTTGCG 604
*** * * ***
consensus_9383#2 GCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCC 489
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCC 1701
consensus_9383#1 GCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCC 664
consensus_9383#2 GCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA 549
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 GCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA 1761
consensus_9383#1 GCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA 724
consensus_9383#2 CACGACGGGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTT 609
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CACGACGG-CTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTT 1820
consensus_9383#1 CACGACGGCTACGCTTATCCTTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTT 784
consensus_9383#2 CGCAAATGCT-CACAAAGAGTAGCGAGATTATTTTAACCTCGGGNA-------------- 654
consensus_9383#3 ------------------------------------------------------------
consensus_9383#0 CGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGT 1880
consensus_9383#1 CGCAAATGCTTCACAAAGAGTAGCGAGATTATTCGCGATGCACGACGATGTGTTTACCGT 844
consensus_9383#2 ----------------
consensus_9383#3 ----------------
consensus_9383#0 GTGTGTTTTGTGCGAA 1896
consensus_9383#1 CGGCGATTCTG----- 855
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||