cluster # 9392

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Anopheles gambiae
cluster # 9392 cluster # 9392 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9392#0 length = 1784 sequences # 14

consensus_9392#1 length = 693 sequences # 2

consensusID : consensus_9392#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1784
fasta sequence

                              [CCGCAATAGAACAAATATCGCATAATTCCTCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAAGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA-CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT-GGAGTCG-CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGCAAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGTTTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTTTAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATGTTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATG--TTTTTTTTGGGCTGGCAGAGTTGTCCTATATAATTGCAATGAAAAGCGATCTCGCAAGAGCGAGAA]

[+] EMBL BM586871             [CCGCAATAGAACAAATATCGCATAATTCCTCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGA TGGTTATTTCGGAAAGGTATTTAAGCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08JNA             [                                           GTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAGGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAA GACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08GKN             [                                           GTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAAGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAA GACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGGTAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCCCCGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AL930792             [                                                                                                  GTTATTTCGGAAAGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTCGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCGCCAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX628193             [                                                                                                                  CTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCATATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM642506             [                                                                                                                                                  ccgAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTTTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCACCCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTTGAGGTGGTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGATGGGAGTCG CAGCGGGACATACACTCACGGGCGACGGACGATCTGCTCGATGCCGGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX620313             [                                                                                                                                                           TGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX605072             [                                                                                                                                                                                                                                    AGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM655951             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08GKO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGAACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATAAACTCGCGGGCAACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTGCCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGAACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGAATGGGTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTCATTTAACCAGAGCTCGAGCATTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX618505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX609631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAA                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08JNB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTCCCGGGACAATCCGGATGTGCCGGCGTCCCACAACCAAAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAG TACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGCAAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGTTTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTTTAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATGTTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATG  TTTTTTTTGGGCTGGCAGAGTTGTCCTATATAATTGCAATGAAAAGCGATCTCGCAAGAGCGAGAA]
[+] EMBL BM639012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGCAAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGTTTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTTTAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATGTTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATGTTTTTTTTTTGGGCTGGAAGAGTTGT                                          ]




>consensus_9392#0
CCGCAATAGAACAAATATCGCATAATTCCTCGTAAAAGCAAATGTTCTGTGAAGTAAATC
GTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAAGGACTTTAA
GCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGA
CGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAG
ATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGG
ATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGT
TTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCAT
CCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAA
CAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTT
TCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTG
CGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCT
GAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCAT
CCACAAGGTGGACGGGGTGAGCGATGACTTTAAGATGGAGTCGCAGCGGGATATACACTC
GCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCT
TACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAAT
TCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGA
AAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGT
GGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTG
CATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCAT
TATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCT
GGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCT
GTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGA
GGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGT
CATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTC
CTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGC
AAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGT
TTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTT
TAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATG
TTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATGTTTTTTTTGGGCTGGCAGAGTT
GTCCTATATAATTGCAATGAAAAGCGATCTCGCAAGAGCGAGAA

consensusID : consensus_9392#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 693
fasta sequence

                              [CCGCCCACGCGTCCGCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGATGGTTATTTCGGAAAGGTATTTAAGCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTT]

[+] EMBL BM645592             [CCGCCCACGCGTCCGCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGATGGTTATTTCGGAAAGGTATTTAAGCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTT]
[+] EMBL CNS08ZM0             [                                                                                                                         GAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAA GACTTTGGGTACGGGGAC                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_9392#1
CCGCCCACGCGTCCGCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTG
TTAATTTTGTTTTTATTTGATGGTTATTTCGGAAAGGTATTTAAGCTTAAAAAACGATAG
TGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTG
TTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTA
CTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGAC
TTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCT
CGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTC
CACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGAC
GACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGAT
TTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTC
GTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCACC
AAGGCGTACAAGGTCAATCCGCGCATCAAGTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9392#0      CCGCAATAGAACAAATATCGCATAATTCCTCGTAAAAGCAAATGTTCTGTGAAGTAAATC 60
consensus_9392#1      ---------------CCGCCCACGCGTCCGCGTAAAAGCAAATGTTCTGTGAAGTAAATC 45
                                        * **    *** ******************************

consensus_9392#0      GTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAAGGACTTTAA 120
consensus_9392#1      GTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGAT-GGTTATTTCGGAAAGGTATTTAA 104
                      ******************************** *** ****************  *****

consensus_9392#0      GCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGA 180
consensus_9392#1      GCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGA 164
                      ** ******** ************************************************

consensus_9392#0      CGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAG 240
consensus_9392#1      CGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAG 224
                      ************************************************************

consensus_9392#0      ATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGG 300
consensus_9392#1      ATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGG 284
                      ************************************************************

consensus_9392#0      ATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGT 360
consensus_9392#1      ATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGT 344
                      ************************************************************

consensus_9392#0      TTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCAT 420
consensus_9392#1      TTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCAT 404
                      ************************************************************

consensus_9392#0      CCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAA 480
consensus_9392#1      CCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAA 464
                      ************************************************************

consensus_9392#0      CAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTT 540
consensus_9392#1      CAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTT 524
                      ************************************************************

consensus_9392#0      TCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTG 600
consensus_9392#1      TCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTG 584
                      ****************************************************** *****

consensus_9392#0      CGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCT 660
consensus_9392#1      CGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCT 644
                      ************************************************************

consensus_9392#0      GAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCAT 720
consensus_9392#1      GAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTT----------- 693
                      ****************************************** ******           

consensus_9392#0      CCACAAGGTGGACGGGGTGAGCGATGACTTTAAGATGGAGTCGCAGCGGGATATACACTC 780
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      GCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCT 840
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      TACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAAT 900
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      TCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGA 960
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      AAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGT 1020
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      GGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTG 1080
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      CATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCAT 1140
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      TATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCT 1200
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      GGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCT 1260
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      GTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGA 1320
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      GGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGT 1380
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      CATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTC 1440
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      CTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGC 1500
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      AAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGT 1560
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      TTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTT 1620
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      TAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATG 1680
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      TTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATGTTTTTTTTGGGCTGGCAGAGTT 1740
consensus_9392#1      ------------------------------------------------------------
                                                                                  

consensus_9392#0      GTCCTATATAATTGCAATGAAAAGCGATCTCGCAAGAGCGAGAA 1784
consensus_9392#1      --------------------------------------------