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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9394#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1254 fasta sequence
[ATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCAAGGAAATCAAGCTCCGTTTTGCGGTACGTGGGGAGGAATTGCCCAAGGGAAAGAAGATTACCGACCACATCATCATCGGCACGCCGGGCAAGCTGATGGACTGGGGCATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTGTGGTCAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGCACCGAATCGGTCGCACNGGACGCTTCNGCAAGAACGGTATCGCCATCAATCTTGTCGACAGTGATCACAGCATGGAAATCTGTAGGACGATTGAGG-CCATTTCCAGAAAAANATTCAACTGCTGGATGCGGAAAATTCGGACGAAATTGAAAAGATTGGCTCCTAGACAAGCGGTGTAAGGGGGGTGGACTATGACCATGATTTCATAAGCGACGAAATTTTCAAAAAAAAAACTAGCTTGGCTCTAGATTTATTACTACTATTACGAGGAACTAAGCAGGAGTGCAAGGTTAGCATTATTACGCGCCGAGAAGCAAAACACTTCGAAGATGGAAAATAACAAACAATTGAAATTAATAAGGAATATTGCCGCTGCTACAGGTGGCTATTATTTTTTGTTGTTCGGAGAGGCATTTTACTTCCT]
[+] EMBL BX606155 [ATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCAAGGAAATCAAGCTCCGTTTTGCGGTACGTGGGGAGGAATTGCCCAAGGGAAAGAAGATTACCGACCACATCATCATCGGCACGCCGGGCAAGCTGATGGACTGGGGCATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAG ]
[+] EMBL BX622686 [ CCGGGCAAGCTGATGGACTGGGGCATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTGTGGTCAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGCACCGAATCGGTCGCACNGGACGCTTCNGCAAGAACGGTATCGCCATCAATCTTGTCGACAGTGATCACAGCATGGAAATCTGTAGGACGATTGAGG CCATTTCCAGAAAAANATTCAACTGCTG ]
[+] EMBL BX606777 [ AAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCG ]
[+] EMBL BX615250 [ ATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGTCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTGTGGTGAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGCACCGAATCGGTCGCACGGGACGCTTCGGCAAGAACGGTATCGCCATCAATCTTGTCGACAGTGATCACAGCATGAAAATCTGTAGGACGATTGAGGCCCATTTCCAGAAAAAGATTCAACTGCTGGATGCGGAAAATTCGGACGAAATTGAAAAGATTGGCTCCTAGACAAGCGGTGTAAGGGGGGTGGACTATGACCATGATTTCATAAGCGACGAAATTTTCAAAAAAAAAACTAGCTTGGCTCTAGATTTATTACTACTATTACGAGGAACTAAGCAGGAGTGCAAGGTTAGCATTATTACGCGCCGAGAAGCAAAACACTTCGAAGATGGAAAATAACAAACAATTGAAATTAATAAGGAATATTGCCGCTGCTACAGGTGGCTATTATTTTTTGTTGTTCGGAGAGGCATTTTACTTCCT]
consensusID : consensus_9394#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 713 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTCGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT-CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT-TAAGCCGGAGCTGCTGCAGGGTGTG]
[+] EMBL BM608748 [CCGCGGACGCGTGGGCGGACGCGTGGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCTGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTAC GTGTGTGTATGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCTATAGGCAAAGACAAAGGAAGCGGGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGTTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTC ]
[+] EMBL BM648494 [ cCGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT TAAGCCGGAGCTGCTGCAGGGTGTG]
[+] EMBL BM593486 [ ccGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT T ]
[+] EMBL BM625169 [ ccgGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATTGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT TAAGCCGGAGCTtg ]
[+] EMBL BM633130 [ ccgTGACGCTCGCTCCTCGGCCTTTGGCTTCCTGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACTCCCCGGCTCACCGTTCGTAGTGAAACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACC TGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCTATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCTCCG ]
[+] EMBL BM621686 [ ccgCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAG ]
[+] EMBL BM580575 [ ccgCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACTCCCCGGCTCACCGTTCGTAGTGAAACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACC TGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCTATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGTGAAGCAGCGGAACCAGCCGCTCCGGCCGTAAATGGTTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTCAAAGCCGGAGCTGCTGC ]
consensusID : consensus_9394#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 700 fasta sequence
[CCGCGGACGCGTGGGCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGG]
[+] EMBL BM621474 [CCGCGGACGCGTGGGCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGG]
consensusID : consensus_9394#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence
[CCGCGGACGCGTGGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGTCGCGTCGATCCGCGCAAACCCTACCCGCAGGTGATCTGCC-TCTCGCCGACGTACGAGCTGGCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCA]
[+] EMBL BM591347 [CCGCGGACGCGTGGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGTCGCGTCGATCCGCGCAAACCCTACCCGCAGGTGATCTGCC TCTCGCCGACGTACGAGCTGGCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCA]
[+] EMBL BM586506 [CCGCCCACGCGT CCG CACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGTCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGTCGCGTCGATCCGCGCAAACCCTACCCGCAGGTGATCTGCCTTCTCGCCGACGTAC ]
consensusID : consensus_9394#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence
[CCGCGGACGCGTGGGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAA]
[+] EMBL BM585827 [CCGCGGACGCGTGGGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAA]
consensusID : consensus_9394#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 396 fasta sequence
[CCGCCCACGCGTCCGGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACTAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCTGAAGCGTCGGGGGAAGCAGCG]
[+] EMBL BM622688 [CCGCCCACGCGTCCGGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACTAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCTGAAGCGTCGGGGGAAGCAGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9394#1 CCGCGGACGCGTGGGCGGACGCGTCGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTC 60
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 --------------------------------------------------------CCGC 4
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 --------ATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGC 52
consensus_9394#1 CGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAG-T 119
consensus_9394#5 ----------------CCGCCCACGCGTCCGG----TTTTTTCTTCGTGCATTTCTAG-T 39
consensus_9394#4 --------------------------------------------CCGCGGACGCGTGGGT 16
consensus_9394#2 GGACGCGTGGGCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAG-T 63
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 TGGCCGATCCGCCACAGAACATGATCGCCCATTCAGACCGGCGAAGTCGCGGCCAAGATG 112
consensus_9394#1 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 176
consensus_9394#5 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 96
consensus_9394#4 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 73
consensus_9394#2 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 120
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 GCCAAGTTCTGCAAGGAAATCAAGCTCCGTTTTGCGGTACGTGGGGAGGAATTGCCCAAG 172
consensus_9394#1 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 235
consensus_9394#5 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 155
consensus_9394#4 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 132
consensus_9394#2 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 179
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 GGAAAGAAGATTACCGACCACATCATCATCGGCACGCCGGGCAAGCTGATGGACTGGGGC 232
consensus_9394#1 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 295
consensus_9394#5 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 215
consensus_9394#4 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 192
consensus_9394#2 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 239
consensus_9394#3 ------------------------------------------------------CCGCGG 6
consensus_9394#0 ATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTG--CTGGACGAGGCGG 290
*
consensus_9394#1 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 349
consensus_9394#5 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 269
consensus_9394#4 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 246
consensus_9394#2 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 293
consensus_9394#3 ACGCGTGGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 61
consensus_9394#0 ACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGT 350
* * * * *** ****** ** ** ** * * * ****
consensus_9394#1 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 404
consensus_9394#5 GGCTGCCGCTACTAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 324
consensus_9394#4 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 301
consensus_9394#2 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 348
consensus_9394#3 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 116
consensus_9394#0 CGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTG 410
* * * * * ** * **** * ** **** * ** ** * **
consensus_9394#1 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 455
consensus_9394#5 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CT 375
consensus_9394#4 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 352
consensus_9394#2 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 399
consensus_9394#3 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 167
consensus_9394#0 CCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCG 470
* * * *** * * * * ** * **** ** **** *
consensus_9394#1 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 512
consensus_9394#5 GAAGCGTCGGGGGAAGCAGCG--------------------------------------- 396
consensus_9394#4 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 409
consensus_9394#2 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 456
consensus_9394#3 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 224
consensus_9394#0 ATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTT 530
* * ** * * *
consensus_9394#1 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 561
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 458
consensus_9394#2 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 505
consensus_9394#3 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 273
consensus_9394#0 CCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAA 590
consensus_9394#1 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 618
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 515
consensus_9394#2 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 562
consensus_9394#3 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 330
consensus_9394#0 CCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCG 650
consensus_9394#1 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAAATCGTTCG 675
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAA-------- 564
consensus_9394#2 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAAATCGTTCG 619
consensus_9394#3 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAAATCGTTCG 387
consensus_9394#0 GCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAA 710
consensus_9394#1 AGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTG---------------------- 713
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 AGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCAC 679
consensus_9394#3 AGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCAC 447
consensus_9394#0 AAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTG 770
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 CGTCCAAGATCCAGGAGACGG--------------------------------------- 700
consensus_9394#3 CGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATC-CGCCACAGAACATG 506
consensus_9394#0 TGGTCAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGC 830
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 ------------------------------------------------------------
consensus_9394#3 ATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGT 566
consensus_9394#0 ACCGAATCGGTCGCACNGGACGCTTCNGCAAGAACGGTATCGCCATCAATCTTGTCGACA 890
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 ------------------------------------------------------------
consensus_9394#3 CGCGTCGATCCGCGCAAACCCTACCCGCAGGTGAT-CTGCCTCTCGCCGACGTACGAGCT 625
consensus_9394#0 GTGATCACAGCATGGAAATCTGTAGGACGATTGAGGCCATTTCCAGAAAAANATTCAACT 950
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 ------------------------------------------------------------
consensus_9394#3 GGCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCA------------- 672
consensus_9394#0 GCTGGATGCGGAAAATTCGGACGAAATTGAAAAGATTGGCTCCTAGACAAGCGGTGTAAG 1010
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 ------------------------------------------------------------
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 GGGGGTGGACTATGACCATGATTTCATAAGCGACGAAATTTTCAAAAAAAAAACTAGCTT 1070
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 ------------------------------------------------------------
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 GGCTCTAGATTTATTACTACTATTACGAGGAACTAAGCAGGAGTGCAAGGTTAGCATTAT 1130
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 ------------------------------------------------------------
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 TACGCGCCGAGAAGCAAAACACTTCGAAGATGGAAAATAACAAACAATTGAAATTAATAA 1190
consensus_9394#1 ------------------------------------------------------------
consensus_9394#5 ------------------------------------------------------------
consensus_9394#4 ------------------------------------------------------------
consensus_9394#2 ------------------------------------------------------------
consensus_9394#3 ------------------------------------------------------------
consensus_9394#0 GGAATATTGCCGCTGCTACAGGTGGCTATTATTTTTTGTTGTTCGGAGAGGCATTTTACT 1250
consensus_9394#1 ----
consensus_9394#5 ----
consensus_9394#4 ----
consensus_9394#2 ----
consensus_9394#3 ----
consensus_9394#0 TCCT 1254
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||