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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9396#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1230 fasta sequence
[TATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGTTCGACGGGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGCTCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCTATGGGGTGAGATGAGGTGGGTAAAGTAAACGTCTTTGATGAATCGTTAATTTATAAATGACGATATNTGCGATTAATGCTAATAATCGGTGTTCAAGAGATCANNATAAAAATAATAAACGTTCTTACTAGTAAAAAAANNNAAAAAAAANAAAAAAAANCNNTTNGGG]
[+] EMBL BX618904 [TATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTAC ]
[+] EMBL BM575476 [ ccgGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGTTCGACGGGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGCTCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGAT ]
[+] EMBL BX620380 [ ACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGTTCGACGGGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGCTCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAANAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAA ATTGC ]
[+] EMBL CF541789 [ GCGCCGGTTCGCTGCAACTGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCTATGGGGTGAGATGAGGTGGGTAAAGTAAACGTCTTTGATGAATCGTTAATTTATAAATGACGATATNTGCGATTAATGCTAATAATCGGTGTTCAAGAGATCANNATAAAAATAATAAACGTTCTTACTAGTAAAAAAANNNAAAAAAAANAAAAAAAANCNNTTNGGG]
[+] EMBL BM610174 [ ccgATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCTATGGGGTGAGATGAGGTGGGTAAAGTAAACGTTTTTGATGAATCGTTAATTTATAAATGACGATATTTGCGATTAATGCTAATAATCGGTTTTCAAGAGATCAAAATAAAAATAATAAACGTTCTTACTAcg ]
consensusID : consensus_9396#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 708 fasta sequence
[CCGCCCACGCG-TCC-CG--CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA-ACGTGGCGTTCGACCGGGA-GGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGA-TTTTGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCG]
[+] EMBL BM584364 [CCGCCCACGCG TCCGCGACCAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATCTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGTGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA ACGTGGCGTTCGACCGGGA GGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGGCG ]
[+] EMBL BM628345 [ cCGCGATCG AC CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAG ]
[+] EMBL BM600365 [ C CG CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGCCCATCCGTACGCCGCGATGAACAAACAGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGAGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTTCCGATGGGCTGTACCACTTCAACACGACACGTGGCGTTCGACCGGGAGGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGA TTTTGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCG]
[+] EMBL BM613029 [ C CG CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA ACGTGGCGTTCGACCGGGA GGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGTGAAGTTTGGC ]
[+] EMBL BM606520 [ GGTCGCCGTATCCCCGCTCCCGCAACCCCGATGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATG ]
[+] EMBL BX601833 [ CGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAAC ]
[+] EMBL BM615509 [ ccgGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGGGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA ACGTGGCGTTCGACCGGGA GGGTGTGGTCGTGTCGCGG ]
consensusID : consensus_9396#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence
[CAGAATTGCCCCGAGGTTAAACGAAGNGAAGGTCTGCGTAGCCCCGCTCCCGTAACCCGCTGTGTCATCCGTACGCCGNCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTTGCTGCTCGTATGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCTGGTGTGGTAGATGTTCATGCTCCTGATCTGTGTTTGATTGCTCGAAACTGTGCCTGAAACCATGCACTGGCTGAACCTGTCTCGCCCAGTATCTATCNGATTATAAACTCCCCCGAGGGCGGAGCGCTACCGATGTGCTGGCATTTTCCCGGAGGGCACNCTGAACCGTGTGGCAACCGCTTCGTTCGTACCATACCCGAAGGATGCTGATCGCACCGTGCAACATCCTTGGAGTACTGAGCCGGTCGTACCGGGACATTTCCTGTGCCTGCACGCAATCGCAAAAGAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCTGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTCGGGGAGGCCGGTATCGAACACGACCGTCTACCCGGAGATG]
[+] EMBL AL931999 [CAGAATTGCCCCGAGGTTAAACGAAGNGAAGGTCTGCGTAGCCCCGCTCCCGTAACCCGCTGTGTCATCCGTACGCCGNCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTTGCTGCTCGTATGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCTGGTGTGGTAGATGTTCATGCTCCTGATCTGTGTTTGATTGCTCGAAACTGTGCCTGAAACCATGCACTGGCTGAACCTGTCTCGCCCAGTATCTATCNGATTATAAACTCCCCCGAGGGCGGAGCGCTACCGATGTGCTGGCATTTTCCCGGAGGGCACNCTGAACCGTGTGGCAACCGCTTCGTTCGTACCATACCCGAAGGATGCTGATCGCACCGTGCAACATCCTTGGAGTACTGAGCCGGTCGTACCGGGACATTTCCTGTGCCTGCACGCAATCGCAAAAGAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCTGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTCGGGGAGGCCGGTATCGAACACGACCGTCTACCCGGAGATG]
consensusID : consensus_9396#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[CCGCGGACGCGTGGGCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCGCTGGAGCTTCGTACGGTTGGGCATTACCGACT]
[+] EMBL BM583914 [CCGCGGACGCGTGGGCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCGCTGGAGCTTCGTACGGTTGGGCATTACCGACT]
consensusID : consensus_9396#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence
[TGCCCTTCCTAACGGCGGCCCAGATCCAGCAGGGGTGGGCATTTTCGAACAACGTGAATCTGCTCGCGGCCGGCGCTAGCTTCCCGGGGGTGGGCAGCACCGGTACGGGAATCTACTCCGGTCGGCGCGGTGAGCTCACGACCGTCATGAACCACGAACCGCAAACCAAGCTTTATGTCGCACAGGTGCCCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTA]
[+] EMBL BX602737 [TGCCCTTCCTAACGGCGGCCCAGATCCAGCAGGGGTGGGCATTTTCGAACAACGTGAATCTGCTCGCGGCCGGCGCTAGCTTCCCGGGGGTGGGCAGCACCGGTACGGGAATCTACTCCGGTCGGCGCGGTGAGCTCACGACCGTCATGAACCACGAACCGCAAACCAAGCTTTATGTCGCACAGGTGCCCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTA]
consensusID : consensus_9396#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 292 fasta sequence
[CAGANTACGGCACGAGGCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGNNCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGNTCNC]
[+] EMBL BX619381 [CAGANTACGGCACGAGGCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGNNCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGNTCNC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9396#1 CCGCCCACGCGTCCCGCAGC-AACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACC 59
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ---CAGAATTGCCCCGAGGTTAAACGAAGNGAAGGTCTGCGTAGCCCCGCTCCCGTAACC 57
consensus_9396#0 ------------------------------------------------------------
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 CCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACT 119
consensus_9396#3 -----------------------CCGCGGAC-----GCGTGGGCTATTTTGCATTTTACT 32
consensus_9396#2 C-GCTGTGTC-ATCCGTACGCCGNCATGAACAAACCGCCAGTCCTATTTTGCATTTTACT 115
consensus_9396#0 ------------------------------------------------------------
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 -GCTGCTCGT-TGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCC 177
consensus_9396#3 -GCTGCTCGT-TGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCC 90
consensus_9396#2 TGCTGCTCGTATGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCC 175
consensus_9396#0 ---------------------------------------------------TATTGGGCC 9
consensus_9396#4 --------------------------------------------------------TGCC 4
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 -GGTGTGGTAGA-GTTCA-GCTCC-GATC---GTGTGAATGG-CGAAACGG---CCGAAA 226
consensus_9396#3 -GGTGTGGTAGA-GTTCA-GCTCC-GATC---GTGTGGATGG-CGAAACGG---CCGAAA 139
consensus_9396#2 TGGTGTGGTAGATGTTCATGCTCCTGATCTGTGTTTGATTGCTCGAAACTGTGCCTGAAA 235
consensus_9396#0 -GGTGTGGTAGA-GTTCA-GCTCC-GATC---GTGTGGATGG-CGAAACGG---CCGAAA 58
consensus_9396#4 CTTCCTAACGGCGGCCCA-GATCC-AGCAGGGGTGGGCATTTTCGAACAAC---GTGAAT 59
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 CCA-GCACGG--CGAACC-GTCTCGCCCAGTATCTATCG-ATTATAAACTCCCCCGAGG- 280
consensus_9396#3 CCA-GCACGG--CGAACC-GTCTCGCCCAGTATCTATCG-ATTATAAACTCCCCCGAGG- 193
consensus_9396#2 CCATGCACTGGCTGAACCTGTCTCGCCCAGTATCTATCNGATTATAAACTCCCCCGAGGG 295
consensus_9396#0 CCA-GCACGG--CGAACC-GTCTCGCCCAGTATCTATCG-ATTATAAACTCCCCCGAGG- 112
consensus_9396#4 CTGCTCGCGG-CCGGCGCTAGCTTCCCGGGGGTGGGCAGCACCGGTACGGGAATCTACTC 118
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 CGGA-CGCTACCGATGTGCTGGCATTTCCC--GAGGGCACGCTGAACCGTGTGGCAACCG 337
consensus_9396#3 CGGA-CGCTACCGATGTGCTGGCATTTCCC--GAGGGCACGCTGAACCGTGTGGCAACCG 250
consensus_9396#2 CGGAGCGCTACCGATGTGCTGGCATTTTCCCGGAGGGCACNCTGAACCGTGTGGCAACCG 355
consensus_9396#0 CGGA-CGCTACCGATGTGCTGGCATTTCCC--GAGGGCACGCTGAACCGTGTGGCAACCG 169
consensus_9396#4 CGGTCGGCG--CGGTGAGCTCACGACCGTC----ATGAACCACGAACCGCAAACCAAGCT 172
consensus_9396#5 ----------------------------------------------------------CA 2
*
consensus_9396#1 CTTCGTTCGTACCACACCCGAAGGATGC-GATCGCACCGTGCAACATCCTTG-AGTAC-G 394
consensus_9396#3 CTTCGTTCGTACCACACCCGAAGGATGC-GATCGCACCGTGCAACATCCTTG-AGTAC-G 307
consensus_9396#2 CTTCGTTCGTACCATACCCGAAGGATGCTGATCGCACCGTGCAACATCCTTGGAGTACTG 415
consensus_9396#0 CTTCGTTCGTACCACACCCGAAGGATGC-GATCGCACCGTGCAACATCCTTG-AGTAC-G 226
consensus_9396#4 TTATGT-CGCACAGGTGCCCAAAATGAC--ATTCCCGAATGCGGCGATT----AACAA-G 224
consensus_9396#5 GANTAC-GGCACGAGG---CAAAATGAC--ATTCCCGAATGCGGCGATT----AACAA-G 51
* ** ** * ** * *** * * * *
consensus_9396#1 AGCCGGTCGT-CCGGGACATTTCCTGTGCC-GCACGCAACCGCAAAA-AGTACGTCGTGA 451
consensus_9396#3 AGCCGGTCGT-CCGGGACATTTCCTGTGCC-GCACGCAACCGCAAAA-AGTACGTCGTGA 364
consensus_9396#2 AGCCGGTCGTACCGGGACATTTCCTGTGCCTGCACGCAATCGCAAAAGAGTACGTCGTGA 475
consensus_9396#0 AGCCGGTCGT-CCGGGACATTTCCTGTGCC-GCACGCAACCGCAAAA-AGTACGTCGTGA 283
consensus_9396#4 ATCCCGCAGC--CGAAAGGTACGCCG-GCC--CAGATGGCC--AAGC-TCTACCTGAAGC 276
consensus_9396#5 ATCCCGCAGC--CGAAAGGTACGCCG-GCC--CAGATGGNNCCAAGC-TCTACCTGAAGC 105
* ** * * ** * * * * *** ** ** *** * *
consensus_9396#1 TTAATCTGACCGAGA----AGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGT 507
consensus_9396#3 TTAATCTGACCGAGA----AGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGT 420
consensus_9396#2 TTAATCTGACCGAGA----AGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGT 531
consensus_9396#0 TTAATCTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACT 343
consensus_9396#4 GTGACCAGATCGACA-----AGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACT 331
consensus_9396#5 GTGACCAGATCGACA-----AGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACT 160
* * * ** * * *** * * ***** * *** *
consensus_9396#1 GCC-GATGGGCTGTACCACTTCAA----CACGAACGTGGCGTT-CGACCGGG-AGGGTGT 560
consensus_9396#3 GCC-GATGGGCTGTACCACTTCAA----CACGAACGTGGCGTT-CGACCGGGGAGGGTGT 474
consensus_9396#2 GCCTGATGGGCTGTACCACTTCAA----CACGAACGTGGCGTT-CGACCGGG-AGGGTGT 585
consensus_9396#0 GCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGT 403
consensus_9396#4 GCTACAGGAGTCGGTCTGCTA--------------------------------------- 352
consensus_9396#5 GCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGT 220
** * * * * * **
consensus_9396#1 --GGTCGTGTC-GCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATC-AACACGA 616
consensus_9396#3 --GGTCGTGTC-GCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATC-AACACGA 530
consensus_9396#2 --GGTCGTGTC-GCGGTACCGAAAGTTCAACCTGT-CGGGGAGGCCGGTATCGAACACGA 641
consensus_9396#0 CAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGG 463
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 CAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGG 280
consensus_9396#1 CCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTT--GGGGTGA-AGTTTGGCCACT 673
consensus_9396#3 CCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGGTGA-AGTTTGGCCACT 589
consensus_9396#2 CCGTCTACCCGGAGATG------------------------------------------- 658
consensus_9396#0 CCGTACGTTCGACG--GGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGC 521
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 CCGTACGNTCNC------------------------------------------------ 292
consensus_9396#1 TTATCTGTTTCGATCTGATGTTCAACCAGCCGGCG------------------------- 708
consensus_9396#3 TTATCTGTTTCGATCTGATGTTCAACCAGCCGGCGCTGGAGCTTCGTACGGTTGGGCATT 649
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 TCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAA 581
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ACCGACT----------------------------------------------------- 656
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 GCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTT 641
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 GTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTAC 701
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 ACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACC 761
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 CGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCA 821
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 TCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCG 881
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 GCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGC 941
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 AGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTC 1001
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 GTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCT 1061
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 ATGGGGTGAGATGAGGTGGGTAAAGTAAACGTCTTTGATGAATCGTTAATTTATAAATGA 1121
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 ------------------------------------------------------------
consensus_9396#3 ------------------------------------------------------------
consensus_9396#2 ------------------------------------------------------------
consensus_9396#0 CGATATNTGCGATTAATGCTAATAATCGGTGTTCAAGAGATCANNATAAAAATAATAAAC 1181
consensus_9396#4 ------------------------------------------------------------
consensus_9396#5 ------------------------------------------------------------
consensus_9396#1 -------------------------------------------------
consensus_9396#3 -------------------------------------------------
consensus_9396#2 -------------------------------------------------
consensus_9396#0 GTTCTTACTAGTAAAAAAANNNAAAAAAAANAAAAAAAANCNNTTNGGG 1230
consensus_9396#4 -------------------------------------------------
consensus_9396#5 -------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||