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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9424#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 967 fasta sequence
[CCGGACCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAACCACCGATGCGACGACAGTTTATGATTCAACAACAGAAGATTCCACAACAGAAGAGTTTACCACTGAAGTCGCAGCATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCCACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTTAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAAGCCGCAACATCCGAGTCAACGACAG]
[+] EMBL BM607715 [CCGGACCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCT ]
[+] EMBL BM656018 [ CCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATG ]
[+] EMBL BM651840 [ CCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAA ]
[+] EMBL BM614771 [ ccGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAAC ]
[+] EMBL BM590749 [ ccgGCTGAACCCAGTGTCAGAGCAGCAGTAGATTGGCTACTAAGCTTCAAGGAATAAGTGAATATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAACAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCGATGCCTCACAGCCAAACAGGCTACGTGACATGTGTTGGAAGGATCAAAATCGCAGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGTACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGTCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTAGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCAAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGCGACGACAACAGTGGATTATGCATCAACCACCGATGCGACGACAGTTTATGATTCAACAACAGAAGATTCCACAACAGA ]
[+] EMBL BM651096 [ ccGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGAATATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGGGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCGATGCCTCACAGCCAAACGGGCTACGTGACATGTGTTGGAAGGATCAAAATCGCAGCCCACTGTCCCGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGTACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGTCCGCAAGTGTTCGATCCGCGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGC ]
[+] EMBL BM637648 [ ccgGCTGAACCCAGTGTCAGAGCAGCAGTAGATTGGCTACTAAGCTTCAAGGAATAAGTGAATATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAACAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCGATGCCTCACAGCCAAACAGGCTACGTGACATGTGTTGGAAGGATCAAAATCGCAGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAA ]
[+] EMBL BM595118 [ ccgCTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATT ]
[+] EMBL BM589202 [ ccgGTGAAGGTGAAGATCCCGCGACGACAACAGTGGATTATGCATCAACCACCGATGCGACGACAGTTTATGATTCAACAACAAAAGATTCCACAACAGAAGAGTTTACCACTGAAGTCGCAGCATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCCACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTTAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAAGCCGCAACATCCGAGTCAACGACAG]
consensusID : consensus_9424#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAGGATTCGATAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCGCTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGTAACATCCGTGTCAACGACGGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAAAAGAATCCACTACAGAAGAATCTTCCACTGAAGTTTCAGTAACTGACTCAACTACAGAAGATTCAACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAAGATTCTACTACAGAAGAGTCCACCACTGAAGTGACAGTATCCACTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTATCAACGATTGAAGTAACACCAGATGAAACGACTTCAAGTTCCTCCACAGAAACAACAACTGCTCTCCCAGTATCTTCAAGTACGGAGAGAACGCCAGTGTCGGGTGCCGAAATTGTTACCGGCATTTCAAAAGCGTTTGAAAAAGTGTCGAG]
[+] EMBL BM587996 [CCGCCCACGCGTCCGCCCACGCGTCCGGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAGGATTCGATAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCGCTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGTAACATCCGTGTCAACGACGGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAAAAGAATCCACTACAGAAGAATCTTCCACTGAAGTTTCAGTAACTGACTCAACTACAGAAGATTCAACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAAGATTCTACTACAGAAGAGTCCACCACTGAAGTGACAGTATCCACTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTATCAACGATTGAAGTAACACCAGATGAAACGACTTCAAGTTCCTCCACAGAAACAACAACTGCTCTCCCAGTATCTTCAAGTACGGAGAGAACGCCAGTGTCGGGTGCCGAAATTGTTACCGGCATTTCAAAAGCGTTTGAAAAAGTGTCGAG]
consensusID : consensus_9424#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence
[CCGAAAAGATTCCACAACAGAAGAGTCTACCACTGAAGTCGCAACATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGGCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCGACAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCGACAACAGAAGAATCTACCACTCAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGATTCGACAACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCCACGACAGAAGATTCTACA]
[+] EMBL BM653847 [CCGAAAAGATTCCACAACAGAAGAGTCTACCACTGAAGTCGCAACATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGGCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCGACAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCGACAACAGAAGAATCTACCACTCAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGATTCGACAACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCCACGACAGAAGATTCTACA]
consensusID : consensus_9424#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence
[CCGGGATTATACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGCATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTAT]
[+] EMBL BM646441 [CCGGGATTATACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGCATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTAT]
consensusID : consensus_9424#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence
[GTCCGCCCACGCGTCCGCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAAAAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACTGAAGAATCTACTACTGTTTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTCACAACAACCATCCGAGTCAACGACGGAGGATTCGACAACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACTACGACTGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGCCTACCACTGCAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCTACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAAAATCTACCACTGGAAGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAAGTTACA]
[+] EMBL BM614696 [GTCCGCCCACGCGTCCGCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAAAAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACTGAAGAATCTACTACTGTTTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTCACAACAACCATCCGAGTCAACGACGGAGGATTCGACAACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACTACGACTGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGCCTACCACTGCAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCTACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAAAATCTACCACTGGAAGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAAGTTACA]
consensusID : consensus_9424#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 552 fasta sequence
[CCGGATTCGACGACAGAAGAATCTACCATCTGAAGTCGCATGCATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTAAGGTCGCAACATCCGCGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCTGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAATGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGATTCAACGACAGAGAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTATAACTGAAGAATCTACCACTGAAGCCGCAACATCCGAGTCTACGACGGAGGATTCGACCACAGAAGAGGCTACCACTGGAAG]
[+] EMBL BM592764 [CCGGATTCGACGACAGAAGAATCTACCATCTGAAGTCGCATGCATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTAAGGTCGCAACATCCGCGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCTGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAATGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGATTCAACGACAGAGAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTATAACTGAAGAATCTACCACTGAAGCCGCAACATCCGAGTCTACGACGGAGGATTCGACCACAGAAGAGGCTACCACTGGAAG]
consensusID : consensus_9424#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence
[CCGAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAG]
[+] EMBL BM656467 [CCGAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAG]
consensusID : consensus_9424#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 444 fasta sequence
[ACTGAGGTCGCAACATCCGCTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTTATCCAACGGAATTGAAGTAACACCCAGATGAAACGACTTCCAAGTTCCTCCCAACAGGAANAACAAGCTAAACTTGTCTTCTTCNCAGAGTATACTTTCAAAGTTACGGCAGGAAGAAAACAGGCCCCAAGGTTGGTTCCGCGGTTGCCTGAGAATTTGTTTACCTCGGGCATTTTCAAATGAGGCGTTTTGGANACAGATAAGCGTGGTTCCGAAAGGCCAATATTCNTCTGGAAAAGAACAACTTTAGAGGCCCAAACAATTAATTTGCNAATTCTGGGGCCCACTTTTAAGAGGCTAAACTTTAGGAAAATGGTATTAGGGAGAACGATGGNTATCGCGTATTGAAACCTN]
[+] EMBL AL932811 [ACTGAGGTCGCAACATCCGCTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTTATCCAACGGAATTGAAGTAACACCCAGATGAAACGACTTCCAAGTTCCTCCCAACAGGAANAACAAGCTAAACTTGTCTTCTTCNCAGAGTATACTTTCAAAGTTACGGCAGGAAGAAAACAGGCCCCAAGGTTGGTTCCGCGGTTGCCTGAGAATTTGTTTACCTCGGGCATTTTCAAATGAGGCGTTTTGGANACAGATAAGCGTGGTTCCGAAAGGCCAATATTCNTCTGGAAAAGAACAACTTTAGAGGCCCAAACAATTAATTTGCNAATTCTGGGGCCCACTTTTAAGAGGCTAAACTTTAGGAAAATGGTATTAGGGAGAACGATGGNTATCGCGTATTGAAACCTN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9424#2 ------------------------------------------------------------
consensus_9424#3 ------------------------------------------------------------
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 CCGGACCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAA 60
consensus_9424#1 ------------------------------------------------------------
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 ------------------------------------------------------------
consensus_9424#3 ------------------------------------------------------------
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 GGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAA 120
consensus_9424#1 ------------------------------------------------------------
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 ------------------------------------------------------------
consensus_9424#3 ------------------------------------------------------------
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 AAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTC 180
consensus_9424#1 ------------------------------------------------------------
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 ------------------------------------------------------------
consensus_9424#3 ------------------------------------------------------------
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 TTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCT 240
consensus_9424#1 ------------------------------------------------------------
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 ------------------------------------------------------------
consensus_9424#3 ------------------------------------------------------------
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 TCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAA 300
consensus_9424#1 ------------------------------------------------------------
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 ------------------------------------------------------------
consensus_9424#3 ------------------------------------------------------------
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 ATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGA 360
consensus_9424#1 ------------------------------------------------------------
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 --CCGAAAAGATTCCACAACAGAAGAGTCTACCACTGAAGTCGCAACATCCGAGTCAACG 58
consensus_9424#3 -----CCGGGATTATACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACG 55
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 CAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTG 420
consensus_9424#1 -------------------------------------CCGCCCACGCGTCCGCCCACGCG 23
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 ACAGAAGATTCTACAACAGAAGAATCTACTA-CTGAGGTCGCA-ACATCCGAGTCAACGA 116
consensus_9424#3 ACGGAGGATTCTACAACAGAAGAGGCTACCA-CTGAAGTCGCA-ACATCCGAGTCTACTA 113
consensus_9424#5 ---CCGGATTCGACGACAGAAGAATCTACCATCTGAAGTCGCATGCATCCGAGTCTACGA 57
consensus_9424#4 -----------GTCCGCCCACGCGTCCGCA--CTGAGGTCGCA-ACATCCGAGTCGACGA 46
consensus_9424#6 ------------------------------------------------CCGA----ACGA 8
consensus_9424#0 ACCACATGTGCAACGGTTTGCCCGCAAGTG--TTCGATCCGAGGAAGCTTGTGCTTGTGG 478
consensus_9424#1 TCCG-GGATTCTACAACTGAAGAATCTACCA-CTGAGGTCGCA-ACATCCGAGTCTACGA 80
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 CAGAAGAGTCCACTACAGAAGA------GGCTACCACTGAGGTGATAGTATCCGAGTCCA 170
consensus_9424#3 CGGAGGATTCTACAACTGAAGA------ATCTACCACTGAAGTCGCAACATCCGAGTCAA 167
consensus_9424#5 CGGAGGATTCTACAACAGAAGA------GGCTACCACTGAAGTTACAGTATCCGAGTCTA 111
consensus_9424#4 CCGAAGAGTCCACTACAGAAGAAAA---GTCTACCACTGAAGTTACAGTATCCGAGTCTA 103
consensus_9424#6 CGGAGGATTCTACAACAGAAGA------GTCTATCACTGAAGTTACAGTATCCGAGTCCA 62
consensus_9424#0 AGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGT 538
consensus_9424#1 CGGAGGATTCGATAACAGAGGA------GTCCACCACTGAGGTGACAGTATCCGAGTCCA 134
consensus_9424#7 -----------------------------------ACTGAGGTCGCAACATCCGCTGCAT 25
** * * * *
consensus_9424#2 CGACAGAAGATTCTACAACTGAAGAATCTACCAC-TG----AAGTCGCAACATCCGAGTC 225
consensus_9424#3 CGACGGAGGATTCTACAACAGAAGAGGCTACCAC-TG----AGGTCGTAACATCCGAGTC 222
consensus_9424#5 CTACGGAGGATTCTACAACTGAAGAATCTACCAC-TA----AGGTCGCAACATCCGCGTC 166
consensus_9424#4 CGACGGAGGATTCTACAACTGAAGAATCTACTAC-TGTTTGAGGTCGCAACATCCGAGTC 162
consensus_9424#6 CGACAGAAGATTCTACAACAGAAGAGTCTACCAC-TG----AGGTGACAGTATCCGAGTC 117
consensus_9424#0 GCCCGAATGATT-TGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTT 597
consensus_9424#1 CGACAGAAGATTCTACAACTGAAGAATCTACCGC-TG----AAGTCGCAACATCCGAGTC 189
consensus_9424#7 C---------TTCAACATCTGAAGTGCCTACATC-CG----AATCAACAACGGAAGCGTC 71
** * ** * * **
consensus_9424#2 TACGACG-----GAGGATTCG------ACAACAGAGGA------GTCCACCACTGAGGTG 268
consensus_9424#3 AACGACG-----GAGGATTCT------ACAACAGAAGA------GGCTACCACTGAAGTT 265
consensus_9424#5 AACGACA-----GAAGAGTCC------ACTACAGAAGA------GTCTACCACTGAGGTG 209
consensus_9424#4 AACGACA-----GAAGAGTCC------ACTACAGAAGA------GTCTACCACTGAGGTC 205
consensus_9424#6 CACGACA-----GAAGATTCT------ACAACTGAAGA------ATCTACCACTGAAGTC 160
consensus_9424#0 TATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAACCACCGATGCG 657
consensus_9424#1 TACTACG-----GAGGATTCT------ACAACAGCAGA------ATCTACCACTGAGGTC 232
consensus_9424#7 AACTCAA------TCGATATCATTTATCCAACGGAATTG-----AAGTAACACCCAGATG 120
* ** * ** * * *** *
consensus_9424#2 ACAGTA----TCCGAGTCCACGACAGAAGATTCGACAACAGAAGAATCTACCACTCAA-G 323
consensus_9424#3 ACAGTA----TCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAA-G 320
consensus_9424#5 ACAGTA----TCTGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAATG 265
consensus_9424#4 ACAACAACCATCCGAGTCAACGACGGAGGATTCGACAACAGAAGAGTCTACCACTGAA-G 264
consensus_9424#6 GCAACA----TCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAG-G 215
consensus_9424#0 ACGACAGTT-TATGATTCAACAACAGAAGATTCCACAACAGAAGAGTTTACCACTGAA-G 715
consensus_9424#1 GTAACA----TCCGTGTCAACGACGGAAGATTCTACAACAGAAGAGTCTACCACTGAG-G 287
consensus_9424#7 AAACGACT--TCCAAGTTCCTCCCAACAGGAANAACAAGCTAAACTTGTCTTCTTCNCAG 178
* * * * * **** ** * * * *
consensus_9424#2 TCGCAACATCCGAGTCTACGACG----GAGGATTCTACAACAGCAGAATC-TACCACTGA 378
consensus_9424#3 TCGCAACATCCGAGTCAACGACG----GAGGATTCTACAACTGAAGAGTC-TACCACTGA 375
consensus_9424#5 CCGCAACATCCGAGTCAACGACG----GAGGATTCTACAACAGAAGAGGC-TACCACTGA 320
consensus_9424#4 TTACAGTATCCGAGTCTACTACGACTGGAGGATTCTACAACTGAAGAGTC-TACCACTGA 323
consensus_9424#6 TCGTAACATCCGAGTCAACGACG----GAGGATTCTACAACAGAAGAGTC-TATCACTGA 270
consensus_9424#0 TCGCAGCATCCGAGTCAACGACA----GAAGATTCTACAACAGAAGAGTC-TACCACTGA 770
consensus_9424#1 TCGCAACATCCGAGTCAACGACA----AAAGAATCCACTACAGAAGAATC-TTCCACTGA 342
consensus_9424#7 AGTATACTTTCAAAGTTACGGCA---GGAAGAAAACAGGCCCCAAGGTTGGTTCCGCGGT 235
* * * ** * * ** * * ** * * * *
consensus_9424#2 GGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGT 438
consensus_9424#3 GGTCGTAACATCCGAGTCAACGACGGAGCA------------------------------ 405
consensus_9424#5 AGTTACAGTATCCGAGTCTACTACGGAGGA------------------------------ 350
consensus_9424#4 GGTCGTAACATCCGAGTCAACGACGGAGGA------------------------------ 353
consensus_9424#6 AGTTACAGTATCCGAGTCCACGACAGAAGA------------------------------ 300
consensus_9424#0 GGTGACAGTATCCGAGTCCACGACAGAAGA------------------------------ 800
consensus_9424#1 AGTTTCAGTAACTGACTCAACTACAGAAGA------------------------------ 372
consensus_9424#7 TGCCTGAGAATTTG--TTTACCTCGGGCATTTTCA---------------------AATG 272
* * * * * ** * *
consensus_9424#2 GACAGATTCGACAACAGAAGAATCTACCACTG-AAGTCGCAACATCCGAGTCTACGACGG 497
consensus_9424#3 ------TTCTACAACAGAAGAGTCTACCACTG-AGGTCGCAACATCCGAGTCAACGACAG 458
consensus_9424#5 ------TTCTACAACTGAAGAATCTACCACTG-AGGTCGCAACATCCGATTCAACGACAG 403
consensus_9424#4 ------TTCTACAACAGAAGAGCCTACCACTGCAGGTCGCAACATCCGAGTCAACGACAG 407
consensus_9424#6 ------TTCTACAACTGAAGAATCTACCACTG-AGGTCGCAACATCCGAGTCGACGACCG 353
consensus_9424#0 ------TTCCACAACAGAAGAATCTACTACTG-AGGTCGCAACATCCGAGTTAACGACAG 853
consensus_9424#1 ------TTCAACAACAGAAGAGTCTACCACTG-AGGTCGCAACATCCGAGTCTACGACGG 425
consensus_9424#7 AGGCGTTTTGGANACAGATAAGCGTGGTTCCGAAAGGC-CAATATTCN--TCTGGAAAAG 329
** ** ** * * * * * * * *** ** * * * *
consensus_9424#2 AG-GATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCC---GAGTCTACTACG 553
consensus_9424#3 AA-GAGTCCACTACAGAAGAATCTACCACTGAAGTCGCAACATCC---GAGTCAACGACG 514
consensus_9424#5 AGAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCC---GAGTCCACGACA 460
consensus_9424#4 AA-GAGTCTACTACAGAAGAGTCTACCACTGAGGTGACAGTATCC---GAGTCCACGACA 463
consensus_9424#6 AA-GAGTCCACTACAGAAGAGTCTACCACTGAAGTTACAGTATCC---GAGTCTACGACG 409
consensus_9424#0 AA-GAGTCCACTACAGAAGAGTCTACCACTGAGGTGATAGTATCC---GAGTCCACGACA 909
consensus_9424#1 AA-GATTCTACTACAGAAGAGTCCACCACTGAAGTGACAGTATCCACTGCATCTTCAACA 484
consensus_9424#7 AA-----CAACTTTAGAGGCCCAAACAATTAATTTGCNAATTCTG---GGGCCCACTTTT 381
* * ** *** * ** * * * * * * * *
consensus_9424#2 ---GAGGATTCTACAACTGAAGAATCTACCACTG----AGGTCG--TAACATC-CGAGTC 603
consensus_9424#3 ---GAGGATTCTACAACTGAAGAATCTACCACTG----AGGTCG--TAACATC-CGAGTC 564
consensus_9424#5 ---GAAGATTCTATAACTGAAGAATCTACCACTG----AAGCCG--CAACATC-CGAGTC 510
consensus_9424#4 ---GAAGATTCTACAACTGAAAAATCTACCACTGG---AAGCCG--CAACATC-CGAGTC 514
consensus_9424#6 ---GAGGATTCTACAACAGAAGAATCTACTACTG----AGGTCG--CAACATC-CGAG-- 457
consensus_9424#0 ---GAAGATTCTACAACTGAAGAATCTACTACTG----AAGCCG--CAACATC-CGAGTC 959
consensus_9424#1 TCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATC-ATTATC 543
consensus_9424#7 ----AAGAGGCTAAACTTTAGGAAAATGGTATTAGGG-AGAACGATGGNTATCGCGTATT 436
* * *** * * * * * ***
consensus_9424#2 TACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCCAC 663
consensus_9424#3 AACGACGGAGGATTCTACAACAGAAGAGTCTAT--------------------------- 597
consensus_9424#5 TACGACGGAGGATTCGACCACAGAAGAGGCTACCACTGGAAG------------------ 552
consensus_9424#4 AACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAAGTTACA-------------- 560
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 AACGACAG---------------------------------------------------- 967
consensus_9424#1 AACGATTGAAGTAACACCAGATGAAACGACTTCAAGTTCCTCCACAGAAACAACAACTGC 603
consensus_9424#7 GAAACCTN---------------------------------------------------- 444
consensus_9424#2 GACAGAAGATTCTACA-------------------------------------------- 679
consensus_9424#3 ------------------------------------------------------------
consensus_9424#5 ------------------------------------------------------------
consensus_9424#4 ------------------------------------------------------------
consensus_9424#6 ------------------------------------------------------------
consensus_9424#0 ------------------------------------------------------------
consensus_9424#1 TCTCCCAGTATCTTCAAGTACGGAGAGAACGCCAGTGTCGGGTGCCGAAATTGTTACCGG 663
consensus_9424#7 ------------------------------------------------------------
consensus_9424#2 ------------------------------
consensus_9424#3 ------------------------------
consensus_9424#5 ------------------------------
consensus_9424#4 ------------------------------
consensus_9424#6 ------------------------------
consensus_9424#0 ------------------------------
consensus_9424#1 CATTTCAAAAGCGTTTGAAAAAGTGTCGAG 693
consensus_9424#7 ------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||