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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9441#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1004 fasta sequence
[TCAGCAGTTTTTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA-ATGTAAATCACTAATACCTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTAT-GGCCAGATATGTTTTAATTTTTTTCCAGTAGGC]
[+] EMBL CNS09DYB [TCAGCAGTTTTTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA ATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGACCCTCTTGATACCAGGTAACAATTTCGCTAAC ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTTCCCACTt ]
[-] EMBL CNS08W1H [ CAGCAGTTTGTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA ATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAATACTCGGTTTTTTTTTTGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAAC ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTAT GGCCAGATAT ]
[+] EMBL CNS08W1I [ cTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA ATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAAC ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAAAAAAAACCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAAAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGAAATGTTTTAATTTTTTTCCAGTAGGC]
[+] EMBL CNS095E3 [ CAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCAGGTCTTTTAACACATATAAATCACTAATACCTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATT ]
[+] EMBL CNS08DDV [ gccGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCAGGTCTTTTAACA ATATAAATCACTAATACCTTTCCATTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTTATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTTACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTTACGCCTGAaa ]
[-] EMBL CNS08DDU [ TGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCAGGTCTTTTAACA ATATAAATCACTAATACCTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAAACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGTCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAA CGATCGTGTGCA ]
[-] EMBL BX627863 [ TAATACNTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAA CGATCG ]
[-] EMBL BX623751 [ CTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGA ]
[-] EMBL BX622522 [ TTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGA ]
[-] EMBL BM619840 [ CAAGGGCCACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTACCGGCAGCGGGAAAACCGATCGTGTGCAGAG ]
consensusID : consensus_9441#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 884 fasta sequence
[TTTTTTTCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCCTTTAACAATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCG-ACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTTAAGCAATCCATCGAAGCCCAGTA]
[-] EMBL CNS0930B [TTTTTTTCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCCTTTAACAATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCG ACCGATTGCCCACTGCCCCGTAACGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGA AACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACG TGCCGCTG ]
[+] EMBL CNS0930C [ GATTAAGAATTGCCGTTTTCTGGGAAATGCCATGAGCCAAGAGCCCCTTGAAACCAGGTAACAATTTCGCCAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGGGCGCCGCACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAAAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTTAAGCAATCCATCGAAGCCCAGTA]
[-] EMBL CNS09DYA [ AATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCG ACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTCAAGCAATCC ]
consensusID : consensus_9441#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 770 fasta sequence
[TTGTTTTTACNNGGCCTTTGNAANCCGAAATTGANCTNACCCAACTCGAACGTGGGNCGAAGAGACCCAAAAGGGTGGGGTGNACCAACGCCGGTTTCGCGCCTGTTTAGNACACCTCTGGAGTAACAAATNNAATTGGGGTGTTGGCTTGCCTCCAAATGCCGCGGGAAGTTTTTGGGCCCNCAGGCGTGGGTNCCAGCCNCGGGCNCTGTTCCGGGTACCGTTTTGGGNAAGAACCAAGTGCGGCAATTTCTGTGTGAACGAATTATTTTTGTTGAGTCCCACCTTANCCACTGTTTTTTGTGTGGCCTTCCTCGANGGGGGGAAGTTAGGCTTCTGGCGAGTTCCCGGAATCGGAACAAGTTGACCATTTGGTCCCATCNTTGTCCTCGTGTCGGGCGTGATGCCGAGCCTCGGAACCAAGGTTCGCTCTGCTTCCTCACCGCCTGTCACTACCGAGTCCGGCAGCAGTTCGACAATCGACATCCTTGGCGATTTTGAAATCTTCTCCTTGTAATGTTGGCTTTCTCATCTGTGTAAATATGCCTTTGTTCTTTGACGAACTCTTGCCCGGATGCGCTTTGCCCGTGCGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCCTGAGAGAGCTCATAATTTGTGTTGCCGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTAATTATACCTGCTGGCTGATTCTGC]
[-] EMBL AL696667 [TTGTTTTTACNNGGCCTTTGNAANCCGAAATTGANCTNACCCAACTCGAACGTGGGNCGAAGAGACCCAAAAGGGTGGGGTGNACCAACGCCGGTTTCGCGCCTGTTTAGNACACCTCTGGAGTAACAAATNNAATTGGGGTGTTGGCTTGCCTCCAAATGCCGCGGGAAGTTTTTGGGCCCNCAGGCGTGGGTNCCAGCCNCGGGCNCTGTTCCGGGTACCGTTTTGGGNAAGAACCAAGTGCGGCAATTTCTGTGTGAACGAATTATTTTTGTTGAGTCCCACCTTANCCACTGTTTTTTGTGTGGCCTTCCTCGANGGGGGGAAGTTAGGCTTCTGGCGAGTTCCCGGAATCGGAACAAGTTGACCATTTGGTCCCATCNTTGTCCTCGTGTCGGGCGTGATGCCGAGCCTCGGAACCAAGGTTCGCTCTGCTTCCTCACCGCCTGTCACTACCGAGTCCGGCAGCAGTTCGACAATCGACATCCTTGGCGATTTTGAAATCTTCTCCTTGTAATGTTGGCTTTCTCATCTGTGTAAATATGCCTTTGTTCTTTGACGAACTCTTGCCCGGATGCGCTTTGCCCGTGCGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCCTGAGAGAGCTCATAATTTGTGTTGCCGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTAATTATACCTGCTGGCTGATTCTGC]
consensusID : consensus_9441#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 491 fasta sequence
[AAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGG]
[-] EMBL BX601709 [AAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGG]
[-] EMBL CNS095E2 [ CCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCACCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGCCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAA GGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGC GGAAAACGATCGTGTGCAGAGTAT GGCCAGATATGTTTTAATTTTACGC ]
[-] EMBL BX620551 [ TCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9441#0 TCAGCAGTTTTTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAAT 60
consensus_9441#1 ------------------------------------------------------------
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 ------------------------------------------------------------
consensus_9441#0 ATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAAC 120
consensus_9441#1 ---TTTTTTTCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAAC 57
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 ------------------------------------------------------------
consensus_9441#0 CGGGTCTTTTAACAATGTAAATCACTAATACCTTTCCGTT-CAAGCGTCGCGCACTTTTG 179
consensus_9441#1 CGGGTCCTTTAACAATGTAAATCACTAATACCTTTCCGTT-TAAGCGTCGCGCACTTTTG 116
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 ---------------------TTGTTTTTACNNGGCCTTTGNAANCCGAAATTGANCTNA 39
consensus_9441#0 TCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGG 239
consensus_9441#1 TCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGG 176
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 CCCAACTCGAACGTGGGNCGAAGAGACCCAAAAGGGT----GGGGTGNACCAACGCCGGT 95
consensus_9441#0 TTAAGATAATGTTAAGATA----TGGAACCATAATTGCATCTACCATATTCTCCCGTGTA 295
consensus_9441#1 TTCAAATAATGTTAAGATA----TGGAACCATAATTGCATCTACCATATTCTCCCGTGTG 232
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 TTCGCGCCTGTTTAGNACACCTCTGGAGTAACAAATNNAATTGGGGTGTTGGCTTGCCTC 155
consensus_9441#0 GAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACC 355
consensus_9441#1 GAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACC 292
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 CAAATGC---CGCGGGAAGTTTTTGGGCCCNCAGGCGTGGGTNCCAGCCNCGGGCNCTGT 212
consensus_9441#0 ACTTG--ACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGC 413
consensus_9441#1 ACTTG--ACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGC 350
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 TCCGGGTACCGTTTTGGGNAAGAACCAAGTGCGGCAATTTCTGTGTGAACGAATTATTTT 272
consensus_9441#0 CGTCTA--------CTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAAT 465
consensus_9441#1 CGTCTA--------CTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAAT 402
consensus_9441#3 ------------------------------------------------------------
consensus_9441#2 TGTTGAGTCCCACCTTANCCACTGTTTTTTGTGTGGCCTTCCTCGANGGGGGGAAGTTAG 332
consensus_9441#0 TTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCG 525
consensus_9441#1 TTCGCTAAC--ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCG 460
consensus_9441#3 ------------------------------------------------AAAAATGGTGCG 12
consensus_9441#2 GCTTCTGGC--GAGTTCCCGGAATCGGAACAAGTTGACCATTTGGTCCCATCNTTGTCCT 390
* * ** *
consensus_9441#0 CCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGC-ATTTTACGATTTTTT 584
consensus_9441#1 CCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGC-ATTTTACGATTTTTT 519
consensus_9441#3 CCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGC-ATTTTACGATTTTTT 71
consensus_9441#2 CGTGTCGG--GCGTGATGCCGAGCCTCGGAACCAAGGTTCGCTCTGCTTCCTCACCGCCT 448
* ** ** ** * * **** * * ** * *
consensus_9441#0 ATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATT 644
consensus_9441#1 ATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATT 579
consensus_9441#3 ATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATT 131
consensus_9441#2 GTCACTACCGAGTCCGGC---AGCAGTTCGACAATCGACATCCTTGGCGATTTTGAAATC 505
******* * * ** * * ** * *** *** * * **
consensus_9441#0 GTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCAC 704
consensus_9441#1 GTCCATTTTTCTC----------------------------------------------- 592
consensus_9441#3 GTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCAC 191
consensus_9441#2 TTCTCCTTGTAATG---------------------------------------------- 519
** * *
consensus_9441#0 CGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTC 764
consensus_9441#1 ------------------------------------------------------------
consensus_9441#3 CGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTC 251
consensus_9441#2 ------------------------------------------------------------
consensus_9441#0 TTTAATTTGCTTCTCATCTTTAATAT--CTTTGTTCTT-GACGAACTCTT-CCCGGATGC 820
consensus_9441#1 CTTAATTTGCTTCTCATCTTTAATAT--CTTTGTTCTT-GACGAACTCTT-CCCGGATGC 648
consensus_9441#3 TTTAATTTGCTTCTCATCTTTAATAT--CTTTGTTCTT-GACGAACTCTT-CCCGGATGC 307
consensus_9441#2 -TTGGCTTTCTCATCTGTGTAAATATGCCTTTGTTCTTTGACGAACTCTTGCCCGGATGC 578
** ** ** ** * ***** ********** *********** *********
consensus_9441#0 GTTG---CCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTAC 877
consensus_9441#1 GTTG---CCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTAC 705
consensus_9441#3 GTTG---CCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTAC 364
consensus_9441#2 GCTTTGCCCGTGCG-CGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTAC 637
* * ******* *** *************** *************************
consensus_9441#0 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCC-TGAGAGAGCTCATAATTTGTGTT 936
consensus_9441#1 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCC-TGAGAGAGCTCATAATTTGTGTT 764
consensus_9441#3 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCC-TGAGAGAGCTCATAATTTGTGTT 423
consensus_9441#2 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCCTGAGAGAGCTCATAATTTGTGTT 697
************************************ ***********************
consensus_9441#0 GCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGG-CCAGATATGTTTTAATTTTTTT 995
consensus_9441#1 GCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACG 824
consensus_9441#3 GCCGGCGGCGGGAAAAC-GATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACG 482
consensus_9441#2 GCCG-CGGCGGGAAAAC-GATCGTGTGCAGAGTATGGGCCAGATATGTTT-AATTATACC 754
**** * ********** ******************* ************ **** *
consensus_9441#0 C--CAGTAGGC------------------------------------------------- 1004
consensus_9441#1 CAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTTAAGCAATCCATCGAAGCCCAGTA 884
consensus_9441#3 CAACAGCGG--------------------------------------------------- 491
consensus_9441#2 TGCTGGCTGATTCTGC-------------------------------------------- 770
* *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||