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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9442#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1469 fasta sequence
[TGGAATTGTGCACATTTGCGCATCGAACATCTGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAG-CTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAGTCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC-ATCGCTATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTTACGTAGCAGAGGCTAAAACAAAGGTTGTTAGATCTGACCACTAGCCTAAACATTACCTTACTTTTTCCGCATTGAAATAGGTCATTATGTTCAATAAATACAATTGAGGTATCATTTAAA]
[+] EMBL CNS08MEW [TGGAATTGTGCACATTTGCGAATCGAACATCTGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAG CTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAGTCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCACAGCTACGAGGTTTCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGAT AAACCATTCGTATATTTGACGCAG ]
[+] EMBL CNS09EA9 [ tATCGAACATCTGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCG AC CTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAGTCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTT CGGGAGCTATGAT ]
[+] EMBL BM585283 [ ccgCGAACATCTGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAGCCTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAGTCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGG ]
[+] EMBL BM602079 [ ccgCGAACATCTGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAGCCTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAGTCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGG ACTAAAATGGGGTGTAGATTTGCTGCAAGA ]
[+] EMBL CNS09PXY [ CTGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAG CTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAGTCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCGCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAG ]
[+] EMBL BM616584 [ ccgCACGTTATCGAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAATCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAGCCTTTCGTCGGTAATCTTGATGGTCATTGTGATGGCGTTGCAGTCATATCCAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAGTATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATACCAACGGAACAGGAGTTGAAATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCATAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGTAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGA ]
[+] EMBL CNS09RTI [ TATGATGAATATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATTACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGAAAAAGGAAAAATATGCAGCTCATCCATCTGTG AACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTA ]
[+] EMBL BM622632 [ ccgAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGC ATCGCTATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGCAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTACAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTAC ]
[-] EMBL CNS09PXZ [ AGCCAGCGAACATGATAATAACTAAAACAGTTCTAGCAATCG TATCGAACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTAAACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTAACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTTACGTAGCAGAGGCTAAAACAAAGGTTGTTAGATCTGACCACTAGCCTAAACATTACCTTACTTTTTCCGCATTGAAATAGGTCATTATGTTCAATAA ]
[-] EMBL CNS08MEX [ CAGCGAACATGATAATAACTAAAACAGTTCTAGCAATCG TATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGAAAAATTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTTACGTAGCAGAGGCTAAAACAAAGGTTGTTAGATCTGACCACTAGCCTAAACATTACCTTACTTTTTCCGCATTGAAATAGGTCATTATGTTCAATAAATACAATTGAGGTATCATTTAAA]
[-] EMBL CNS09RTJ [ AAACAGTTCTAGCAATC CTATCGCACAGCTACGAGGGGTTTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAACTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTTACGTAGCAGAGGCTAAAACAAAGGTTGTTAGATCTGACCACTAGCCTAAACATTACCTTACTTTTTCCGCATTGAAATAGGTCATTATGTTCAATA ]
[-] EMBL CNS09EAA [ atTCG TATCGCACAGCTACGA GGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGGACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACATTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAATATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTAACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTTACGTAGCAGAGGCTAAAACAAAGGTTGTTAGATCTGACCACTAGCCTAAACATTACCTTACTTTTTCCGCATTGAAATAGGTCATTATGTTCAATAAATACAATTGAa ]
[+] EMBL BX626639 [ TAATATTATATGATCAACGTGAAACAAAACCCATCCGCAAAATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGTATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAGACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGCACTGCCAAGCTGAAGAATAAAAGGAAGGAAGAAAACAAACGCAAAAATTCGAAGCCTGGTAGTATACCTT ]
[+] EMBL BX626580 [ ATAGTGATGACTCTACGTTCTAATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATAATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACGTAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCTATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTT ]
[+] EMBL BX617361 [ TAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTTAC ]
[+] EMBL BX610899 [ GCAGCTAAGGCTAATAGTAGAGAAATATACCACACAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCTCCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGATCATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATGCAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACAATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAACGCCAAAATTCGAAGCCTGATAGTATACCTTACGTAGCAGAGGCTAAAACAAAGGTTGTTAGATCTGACCACTAGCCTAAACATTACCTTACTTTCTCCGCATTGAAATAGGTCATTATGTTCAATAAATACAAATGA ]
consensusID : consensus_9442#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence
[CCGCCCACGCGTCCGGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAGCCTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAATCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCCCAGGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATA]
[+] EMBL BM603577 [CCGCCCACGCGTCCGGAGTTCTCCACGTTATCAAATATGAAAGTTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACAAGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGCGTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAGCCTTTCGTCGGTAATCTTGATGGTCATCGTGATGGCGTTGCAATCATATCTAAGAACTTCGCTAAAATATCTCTTATTGCAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGATGAATATTAATGCCCAGGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCAGCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCACAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9442#0 TGGAATTGTGCACATTTGCGCATCGAACATCTGAGTTCTCCACGTTATCAAATATGAAAG 60
consensus_9442#1 -----------CCGCCCACGCGTC------CGGAGTTCTCCACGTTATCAAATATGAAAG 43
* *** ** * ****************************
consensus_9442#0 TTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACA 120
consensus_9442#1 TTAAAGTTATTACAAGGAATCCTGACCGATATGTCCGTGAGACTAAACAAGATATTCACA 103
************************************************************
consensus_9442#0 AGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGC 180
consensus_9442#1 AGTCTTTCCGTAATTATGATAGAGAAGTACACCCATTTCAAAGCACAAGGGAGTACGTGC 163
************************************************************
consensus_9442#0 GTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAGC-TTTCGTCGGTAATCTTG 239
consensus_9442#1 GTGCTTTGAATGCTACCAAACTGGAAAGAGTATTTGCGAAGCCTTTCGTCGGTAATCTTG 223
****************************************** *****************
consensus_9442#0 ATGGTCATCGTGATGGCGTTGCAGTCATATCTAAGAACTTCGCTAAAATATCTCTTATTG 299
consensus_9442#1 ATGGTCATCGTGATGGCGTTGCAATCATATCTAAGAACTTCGCTAAAATATCTCTTATTG 283
*********************** ************************************
consensus_9442#0 CAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGA 359
consensus_9442#1 CAAGTGGTGCTTACGACGGCGATGTCAAGCTGTGGTATGTGGCTGATAAATCATGTATGA 343
************************************************************
consensus_9442#0 TGAATATTAATGCCCATGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCA 419
consensus_9442#1 TGAATATTAATGCCCAGGTCGGATATTGTCGAGGAATTGCATTCAGCTCCGACGAATCCA 403
**************** *******************************************
consensus_9442#0 GCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCA 479
consensus_9442#1 GCCTAATTACGATTGGCGACGATAAGAAAATTATGACATGGAATTTCAATATCAACGGCA 463
************************************************************
consensus_9442#0 CAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATAACTAAAACAGTTCTAGCATCGC 539
consensus_9442#1 CAGGAGTTGATATTGTTAAGCCAGCGAACATGATAATA---------------------- 501
**************************************
consensus_9442#0 TATCGCACAGCTACGAGGGGCCTAACTTTGCAACGAGTGGAGAAACTTGCCATATCTGGG 599
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 ACGAAAGTCGCAACGAACCTTTGAAGGAACTAAAATGGGGTGTAGATTTGCTGCAAGACA 659
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 TTAAGTACAATCCAATCGAAACAACACTTCTTGCGGCATGTGGTTCGGATCGAGGGATAA 719
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 TATTATATGATCAACGTGAAACAAAACCCATCCGGAAAATAGTGATGACTCTACGTTCTA 779
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 ATCAGCTTTCGTGGAATCCAATGCAAGCATTTTATTTCACTGTAGCTAACGAGGACTATA 839
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 ATCTTTACACGTACGATATTAGGCGGTTCACAAACCCGTTAAAAATACACCATGGCCACG 899
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 TAGGTCCAGTTACATCGGTCGATTATGCTCCTACTGGAAGAGAGTTTGTTTCCGGAAGCT 959
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 ATGATAAAACCATTCGTATATTTGACGCAGCTAAGGCTAATAGTAGAGAAATATACCACA 1019
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 CAAAACGCATGCAACACGTCACGTGCGTCAACTGGAGTATGGATAATAAATACATATTCT 1079
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 CCGGATCCGATGAGATGAATATTCGTGTATGGAAGGCAAATGCAGCCGAAAAACTGGGAT 1139
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 CATTACAAATGCGTGAAAAGAATGCATTTAACTACAATACTGTGCTAAAGGAAAAATATG 1199
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 CAGCTCATCCATCTGTGAAACGTATCGCCCAGCATCGTCAAGTACCGAAAATGGTTTACA 1259
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 ATCAACAGGCTAAAATTCGTACTGCCAAGCTTAAGAATAAAAGGAAGGAAGAAAACAAAC 1319
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 GCCAAAATTCGAAGCCTGATAGTATACCTTACGTAGCAGAGGCTAAAACAAAGGTTGTTA 1379
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 GATCTGACCACTAGCCTAAACATTACCTTACTTTTTCCGCATTGAAATAGGTCATTATGT 1439
consensus_9442#1 ------------------------------------------------------------
consensus_9442#0 TCAATAAATACAATTGAGGTATCATTTAAA 1469
consensus_9442#1 ------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||