cluster # 9459

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Anopheles gambiae
cluster # 9459 cluster # 9459 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9459#0 length = 1106 sequences # 12
consensus_9459#1 length = 797 sequences # 2

consensus_9459#2 length = 420 sequences # 2
consensus_9459#3 length = 277 sequences # 1

consensusID : consensus_9459#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1106
fasta sequence

                              [CCGGTAGAGGCAGCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGA-AACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCG-A-CGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAA-GTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGC-GTCGTCCTGTGCACCCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACCAATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGAGTACAAACCGCACGGCGACAGTCTGAAGTTTGTGCCTGCCTGAATCTGCCCTTTTGGAGAAGAGGCAATCCCCCTCGATCACTCTCGTCCCCCCCCCCCCCCCCTCCCACAACTTCCACAAGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGG-TCCGCGCGATTGTTTGGGTGGGTTTTTATTGTGTTTTGTTGATGTTTTCGTCAGTGGTCGAAAAGAAAAACGAAACGAAACGATCCAACTAACAACACACGCACCACCATTCACCACCACAACTAAGCAGCATTCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACAACAAACACCACACAATAAAAAAAAAAAAAA]

[+] EMBL BM607434             [CCGGTAGAGGCAGCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGA AACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCG A CGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGC GTCGTCCTGTGCACCCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACCAATCGCATCCGGGACACGCT                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08XW8             [   ggAGAGACATCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGA AACATTTCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGTACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCG A CGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGCCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAA GTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGC GTCGTCCTGTGCACCCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACCAATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGAGTACAAACCGCACGGCGACAGTCTGAAGTTTGTGCCTGCCTGAATCTGCCCTTTTGGAGAAGAGGCAATCCCCCTCGATCACTCTCGTCCCCCCCCCCCCCCCCCCCCAAAACTTCCAAAAGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGC                                                                                                                                                                                                                                       ]
[+] EMBL CNS08I0G             [                            CAAGGCAAAAGCGCAAAGCGATAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAG G ACCGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAA GTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGTCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGCTGTCGTCCTGTGCACCCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACCAATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGAGTACAAACCGCACGGCGACAGTCTGAAGTTTGTGCCTGCCTGAATCTGCCCTTTTGGAGAAGAGGCAATCCCCCTCGATCCCTCTCG   CCCCCCCCCCCCCC CCCAAAATTTCCAAAA                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08RCC             [                                  AAAAGCGCAAAGCGAGAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCG ACCGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAA GTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM575049             [                                    ccGCGCAAAGCGA AACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCG A CGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGC GTCGTCCTGTGCACCCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACCAATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGAGTAC                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS08VJ5             [                                              CGA AACATTTCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGTACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGAA CGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAA GTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGGGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGC GTCGTCCTGTGCACCCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACCAATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGAGTACAAACCGCACGGCGACAGTCTGAAGTTTGTGCCTGCCTGAATCTGCCCTTTTGGAGAAGAGGCAATCCCCCTCGATCACTCTCGTCCCCCCCCC                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX616259             [                                                                                                                                                                                                                                                                                                                                                                                               CATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGTTACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGC GTCGTCCTGTGCACCCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACCAATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGAGTACAAACCGCACGGCGACAGTCTGAAGTTTGTGCCTGCCTGAATCTGCCCTTTTGGAGAAGAGGCAATCCCCCTCGATCCCTCTCGT    CCCCCCCCCCTCTCCCACAACTTCCACAAGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGGCTCCGCGCGATTGTTTGGGTGGGTTTTTATTGTGTTTTGTTTAAGTTTTCGTCAGTGGTCGAAAAGAAAAACGAAACGAAACGATCCAACTAACAACACACGCACCACCATTCACCACCACAACTAAGCATCATTCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACAACAAACA                       ]
[-] EMBL CNS08I0H             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGGGAAGAGGGAAACCCCCCCGATCCCTTTTG   CCCCCCCCCCCCCCTCCCACAACTTCCACAAGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGG TCCGCGCGATTGTTTGGGTGGGTTTTTATTGTGTTTTGTCGATGTTTTCGTCAGTGGTCGAAAAGAAAAACGAAACGAAACGATCCAACTAACAACACACGCACCACCATTCACCACCACAACTAAGCAGCATTCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACA                              ]
[-] EMBL CNS08VJ6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCCCGATTAATTTTGTCCCCCCCCCCCCCCCCTCCCACAACTTCCACAAGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGG TCCGCGCGATTGTTTGGGCGGGTTTTTATTGTGTTTTGTTGATGTTTTCGTCAGTGGTCGAAAAGAAAAACGAAACGAAACGATCCAACTAACAACACACGCACCACCATACACCACCACAAGTAAGCAGCATTCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACA                              ]
[-] EMBL CNS08XW9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ttGTCCCCCCCCCTCCCCCCTCCCACAACTTCCACAAGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGC TCCGCGCGATTGTTTGGGCGGGTTTTTATTGTGTTTTGTTGATGTTTTCGTCAGTGGTCGAAAAGAAAAACGAAACGAAACGATCCAACTAACAACACACGCACCACCATACACCACCACAAGTAAGCAGCATTCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACAACAAACACCACACAATAAAAAAA       ]
[-] EMBL AGA283316            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCCACAACTTCCACAAGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGGCTCCGCGCGATTGTTTGGGTGGGTTTTTATTGTGTTTTGTCGATGTTTTCGTCAGTGGTCGAAAAGAAAAACGAAACGAAACGATCCAACTAACAACACACGCACCACCATTCACCACCACAACTAAGCAGCATTCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACAACAAACACCACACAATAAGAGGAAAAAAAA]
[-] EMBL CNS08RCD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ttttttACAACTTCCAC AGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGG TCCGCGCGATTGTTTGGGTGGGTTTTTATTGTGTTTTGTCGATGTTTTCGTCAGTGGTCGAAAAGAAAAACGAAACGAAACGATCCAACTAACAACACACGCACCACCATTCACCACCACAACTAAGCAGCATTCATTTTTCCTACA                                                                       ]




>consensus_9459#0
CCGGTAGAGGCAGCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGC
AAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATA
CACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCG
ACGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGG
GACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCAC
ACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGC
AGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGTT
ACATTTGTTTAAGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGG
CAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCAT
GGCGATGCTGGGGGAACAGTTTCTGGTAGGGTCGGAAATTTGTGGCGTCGTCCTGTGCAC
CCAGTACCCCGAGGACGTCCTGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCAC
CAATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGA
GTACAAACCGCACGGCGACAGTCTGAAGTTTGTGCCTGCCTGAATCTGCCCTTTTGGAGA
AGAGGCAATCCCCCTCGATCACTCTCGTCCCCCCCCCCCCCCCCTCCCACAACTTCCACA
AGTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGGTCCGCGCGATTG
TTTGGGTGGGTTTTTATTGTGTTTTGTTGATGTTTTCGTCAGTGGTCGAAAAGAAAAACG
AAACGAAACGATCCAACTAACAACACACGCACCACCATTCACCACCACAACTAAGCAGCA
TTCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACAACAA
ACACCACACAATAAAAAAAAAAAAAA

consensusID : consensus_9459#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 797
fasta sequence

                              [AGGCAAGAATCGGCACGTAGGCACAAAAACACCTCGCATACTGTAGAGGCAGCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGTTACATTTGTATTAACGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTACGGGTCGGAAATNTGTAGCGTCGTCCTGTGCACCCAGTACCCGAGGACGTCCATGTCCGTGTTGGAAACCGGAAGCGGGCGCACCNGGAGTTACGGTCCAGGGNACCGAATCGGNCAATCCCGGGGGACAACGGGCCTTGACCGGAGGCAAGAACTTGGNNANCCGTACGTGCGAAANTCGGAGAGG]

[+] EMBL BX468345             [AGGCAAGAATCGGCACGTAGGCACAAAAACACCTCGCATACTGTAGAGGCAGCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGTTACATTTGTATTAACGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACAGTTTCTGGTACGGGTCGGAAATNTGTAGCGTCGTCCTGTGCACCCAGTACCCGAGGACGTCCATGTCCGTGTTGGAAACCGGAAGCGGGCGCACCNGGAGTTACGGTCCAGGGNACCGAATCGGNCAATCCCGGGGGACAACGGGCCTTGACCGGAGGCAAGAACTTGGNNANCCGTACGTGCGAAANTCGGAGAGG]
[+] EMBL BX604040             [                                          GTAGAGGCAGCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCCGTCGGT                                                                                                                                                                                                                                                                                                                                                                                                                             ]




>consensus_9459#1
AGGCAAGAATCGGCACGTAGGCACAAAAACACCTCGCATACTGTAGAGGCAGCAAAGCAA
AAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTGA
ATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGT
CCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGATG
CGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTAC
AGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTACGACA
AATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGCAGTGGTGGTCCCTGTACTGCC
ATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGTTACATTTGTATTAACGAGTGG
CATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAAGTGGGTCATTCGCCT
GAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGCGATGCTGGGGGAACA
GTTTCTGGTACGGGTCGGAAATNTGTAGCGTCGTCCTGTGCACCCAGTACCCGAGGACGT
CCATGTCCGTGTTGGAAACCGGAAGCGGGCGCACCNGGAGTTACGGTCCAGGGNACCGAA
TCGGNCAATCCCGGGGGACAACGGGCCTTGACCGGAGGCAAGAACTTGGNNANCCGTACG
TGCGAAANTCGGAGAGG

consensusID : consensus_9459#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 420
fasta sequence

                              [CCGAAGAATCGCCCGAG--GAGC-AAAGC-AGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGATGC-GGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGC-GGAGTACGACAAATCCCTACACTTCGT-CGGTCGGTGTGCCAGCGTAG-AGCAGT-GGT-GGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGT]

[+] EMBL AL932667             [   AAGAATCGCCCGAG  GAGC AAAGC AGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGATGC GGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGC GGAGTACGACAAATCCCTACACTTCGT CGGTCGGTGTGCCAGCGTAG AGCAGT GGT GGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGT]
[+] EMBL BM582858             [ccgcccacgCGTCCGAGCAAAGCAAAAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGATGCGGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGGTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGGAGTACGACAAATCCCTACACTTCGTCCGGTCGGTGTGCCAGCGTAGAAGCAGTGGGTGGGCCCCTGTACTG                                         ]




>consensus_9459#2
CCGAAGAATCGCCCGAGGAGCAAAGCAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGC
AAACATTCTGTGATAACGTGAATAATTATACAAAAACCAGTTGCACCACTCTGTTACATA
CACCGGCGTCTTTAAATATGTCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCG
ACGATAGCGGGGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGG
GACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCAC
ACAGAGCAGCGGAGTACGACAAATCCCTACACTTCGTCGGTCGGTGTGCCAGCGTAGAGC
AGTGGTGGTCCCTGTACTGCCATCTAATAAAACCTACCAGCCTGAAACCTTACCGAAGGT

consensusID : consensus_9459#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 277
fasta sequence

                              [CGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGAGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGTTTGTTAAACAGCTCCCAGGCGCAACGCCATGCAAATGTAGCTCGTACTAACGTTTGGGCCTTGGTTGGGCGTGTTTGCTTTTTACAGGAGTACGACAAATCCCTACACTTCGTCG]

[+] EMBL AGA284610            [CGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGAGACGAGGATGCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGTTTGTTAAACAGCTCCCAGGCGCAACGCCATGCAAATGTAGCTCGTACTAACGTTTGGGCCTTGGTTGGGCGTGTTTGCTTTTTACAGGAGTACGACAAATCCCTACACTTCGTCG]




>consensus_9459#3
CGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGAGACGAGGATGCGGATATCGA
TGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTACAGTACACCTA
CTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGTTTGTTAAACAGCTCCCAG
GCGCAACGCCATGCAAATGTAGCTCGTACTAACGTTTGGGCCTTGGTTGGGCGTGTTTGC
TTTTTACAGGAGTACGACAAATCCCTACACTTCGTCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9459#1      AGGCAAGAATCGGCACGTAGGCACAAAAACACCTCGCATACTGTAGAGGCAGCAAAGCAA 60
consensus_9459#2      ----------------------------------------CCGAAGAATCGCCCGAGGAG 20
consensus_9459#0      ---------------------------------------CCGGTAGAGGCAGCAAAGCAA 21
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      -AAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTG 119
consensus_9459#2      CAAAGCAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTG 80
consensus_9459#0      -AAGCAAGCAAGGCAAAAGCGCAAAGCGAAACATTGCAGCAAACATTCTGTGATAACGTG 80
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      AATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATG 179
consensus_9459#2      AATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATG 140
consensus_9459#0      AATAATTATACAAAAACCAGTTGCACCACTCTGTTACATACACCGGCGTCTTTAAATATG 140
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      TCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGAT 239
consensus_9459#2      TCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGAT 200
consensus_9459#0      TCCAACAAATACGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGGGACGAGGAT 200
consensus_9459#3      -----------CGAAATCAAACCATACGCCAGCGACAGCGACGATAGCGGAGACGAGGAT 49
                                 *************************************** *********

consensus_9459#1      GCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTA 299
consensus_9459#2      GCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTA 260
consensus_9459#0      GCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTA 260
consensus_9459#3      GCGGATATCGATGTGGATAAGTTAGAACCGCTAGAAGCGGGACCCGGAGAGCATAAGCTA 109
                      ************************************************************

consensus_9459#1      CAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTAC--G 357
consensus_9459#2      CAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTAC--G 318
consensus_9459#0      CAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGAGTAC--G 318
consensus_9459#3      CAGTACACCTACTGTTTATGGTTCGGCAAAAAGGGTTCACACAGAGCAGCGGTTTGTTAA 169
                      ****************************************************  *     

consensus_9459#1      ACAAATCCCTA-CACTTCGTCGGTCGG--------TGTGCCAGCGTA-GAGCAGTGGTGG 407
consensus_9459#2      ACAAATCCCTA-CACTTCGTCGGTCGG--------TGTGCCAGCGTA-GAGCAGTGGTGG 368
consensus_9459#0      ACAAATCCCTA-CACTTCGTCGGTCGG--------TGTGCCAGCGTA-GAGCAGTGGTGG 368
consensus_9459#3      ACAGCTCCCAGGCGCAACGCCATGCAAATGTAGCTCGTACTAACGTTTGGGCCTTGGTTG 229
                      ***  ****   * *  ** *   *           ** * * ***  * **  **** *

consensus_9459#1      TCCCTGTACTGCCATCTAATAAAACCTACCAG--CCTGAAACCTTACCGAAGGTTACATT 465
consensus_9459#2      TCCCTGTACTGCCATCTAATAAAACCTACCAG--CCTGAAACCTTACCGAAGGT------ 420
consensus_9459#0      TCCCTGTACTGCCATCTAATAAAACCTACCAG--CCTGAAACCTTACCGAAG-TTACATT 425
consensus_9459#3      GGCGTGT-TTGCTTTTTACAGGAGTACGACAAATCCCTACACTTCGTCG----------- 277
                        * ***  ***  * **    *      **   **  * ** *   **           

consensus_9459#1      TGTATTAACGAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAA 525
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      TGTTTAA--GAGTGGCATCAAACCCATGTGGGAAGATCCGAGCAATTCGAAAGGCGGCAA 483
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      GTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGC 585
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      GTGGGTCATTCGCCTGAAGAAATCAAAGATCGACCGGGCCTGGGAGAACGTGTGCATGGC 543
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      GATGCTGGGGGAACAGTTTCTGGTACGGGTCGGAAATNTGTAGCGTCGTCCTGTGCACCC 645
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      GATGCTGGGGGAACAGTTTCTGGTA-GGGTCGGAAATTTGTGGCGTCGTCCTGTGCACCC 602
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      AGTACCC-GAGGACGTCCATGTCCGTGTTGGA------------------AACCGGAAGC 686
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      AGTACCCCGAGGACGTCC-TGTCCGTGTGGAACCGAACCGCCACCGATACGGTCAGCACC 661
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      GGGCGCACCNGGAGT-TACGGTCCAGGGNACCGAATCGGNCAATCCCGGGGGACAACGGG 745
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      AATCGCATCCGGGACACGCTGCGGCGCATACTGAACCTACCTCAATCGCAGCACATCGAG 721
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      CCTTGACCGGAGGCAAGAACTTGGNNANCCGTACGTGCGAAANTCGGAGAGG-------- 797
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      TACAAACCGCACGGCGACAGTCTGAAGTTTGTGCCTGCCTGAATCTGCCCTTTTGGAGAA 781
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      ------------------------------------------------------------
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      GAGGCAATCCCCCTCGATCACTCTCGTCCCCCCCCCCCCCCCCTCCCACAACTTCCACAA 841
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      ------------------------------------------------------------
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      GTCTGATCGCGTACTGGACTTTTTGTTGCTGCAGCATCCGGGGTGGGTCCGCGCGATTGT 901
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      ------------------------------------------------------------
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      TTGGGTGGGTTTTTATTGTGTTTTGTTGATGTTTTCGTCAGTGGTCGAAAAGAAAAACGA 961
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      ------------------------------------------------------------
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      AACGAAACGATCCAACTAACAACACACGCACCACCATTCACCACCACAACTAAGCAGCAT 1021
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      ------------------------------------------------------------
consensus_9459#2      ------------------------------------------------------------
consensus_9459#0      TCATTTTTCCTACAATAATAAACGTTCGTATATTGAAGATTCTATACAAACCACAACAAA 1081
consensus_9459#3      ------------------------------------------------------------
                                                                                  

consensus_9459#1      -------------------------
consensus_9459#2      -------------------------
consensus_9459#0      CACCACACAATAAAAAAAAAAAAAA 1106
consensus_9459#3      -------------------------