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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9470#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1360 fasta sequence
[GGCAAGAATCCCGACGAGNGTAAGACAGAAGAAACATCCCAGTGGCGCCCTATCGAAAAGGCGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCTGGGTTTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTC-GCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAA-AAGCAGAAGGGCAA-CCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGC-TGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGAACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAACCGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCA-TTTTTTATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACCACTACCCTCTTCAAGAATAAACTTTCTTTTATTTCATACTT]
[+] EMBL BX469214 [GGCAAGAATCCCGACGAGNGTAAGACAGAAGAAACATCCCAGTGGCGCCCTATCGAAAAGGCGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCTGGGTTTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCAGCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAGAAGCAGAAGGGCAAGCCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTNCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCGTGGGGCCATCG ]
[+] EMBL BX626226 [ CCAGTGGCGCCCTATCNAAAAGGCGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTC GCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAA AAGCAGAAGGGCAA CCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGC TGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGANGACATTGTTCTTCGCTTTCTGCNAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTA ]
[+] EMBL BM654040 [ cgtccGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAA AAGCAGAAGGGCAA CCCATACAAGAGCATCAGCTGCCC CAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGC TGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACC ]
[+] EMBL BX611878 [ TCTATTGGTCTGCCATCACCTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCG ]
[+] EMBL BX612041 [ ACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGAACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAACCGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCATTTTTTTATGAAACACTCCAAATTAATT ]
[-] EMBL CNS09G53 [ TCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGACAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGAACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAACCGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCA TTTTTTATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACCACTACCCTCTTCAAGAATAAACTTTCTTTTATTTCATACTT]
[-] EMBL CNS099T7 [ TACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCA TTTTTTATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACCACTACCCTCTTCAAGAATAAAC ]
consensusID : consensus_9470#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 846 fasta sequence
[GTTGGATACGATTGGACGAGCAAAAATAAGTGAAGAGG-AAACAGT-GCGAAGA-TGAAAAAACATCCCAGTGGCGCCCTA-TCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG-ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT-GGGTGTG-CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACA]
[+] EMBL CNS09G52 [GTTGGATACGATTGGACGAGCAAAAATAAGTGAAGAGGAAAACAGT GCGAAGACTGAAAAAACATCCCAGTGGCGCCCTA TCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAG CGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTAGGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCG ]
[+] EMBL CNS099T6 [ AAGTGAAGAGG AAACAGT GCGAAGACTGAAAAAACATCCCAGTGGCGCCCTA TCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAA CCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCGCACACGATACTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTGGGGTGTGTCTTTGCGACCGAGGAGGATGATAA ]
[+] EMBL BX468908 [ GAGG CAAGAATCGGCACGA TGGAGAAACATCCCAGTGGCGCCCTACTCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAACAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCA ]
[+] EMBL BM616655 [ ccgGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCTGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCA ]
[+] EMBL BX615784 [ GACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAACAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCT ]
[+] EMBL BM613147 [ cccacgcgtCCG CGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACC ]
[+] EMBL BX624761 [ CAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACA]
[+] EMBL BM617214 [ ccgCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGC ]
consensusID : consensus_9470#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 630 fasta sequence
[CCGGAAAAGGCGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTG]
[+] EMBL BM596377 [CCGGAAAAGGCGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTG]
consensusID : consensus_9470#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 521 fasta sequence
[AGATCGCCACGAGGTGTGATAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGTCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCGTAAGTGATCG]
[+] EMBL AL696249 [AGATCGCCACGAGGTGTGATAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGTCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCGTAAGTGATCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9470#0 ------------------------------------------------------------
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 GTTGGATACGATTGGACGAGCAAAAATAAGTGAAGAGGAAACAGTGCGAAGATGAAAAAA 60
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 -----------------------------------------------------------G 1
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 CATCCCAGTGGCGCCCTATCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGC 120
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 GCAAGAATCCCGACGAGNGTAAGACAGAAGAAACATCCCAGTGGCGCCCTATCGAAAAGG 61
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 GCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCT 180
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 CGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGG 121
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGG 240
consensus_9470#2 -----------CCGGAAAAGGCGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGG 49
consensus_9470#0 CAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGG 181
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 CAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGG 300
consensus_9470#2 CAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGG 109
consensus_9470#0 TGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGA 241
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 CGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGA 360
consensus_9470#2 CGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGA 169
consensus_9470#0 GCGGTACTGCTGGGTTTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCA 301
consensus_9470#3 -----------------------AGATCGCCACGA--GGTGTGATAGCGCCGTGGGTGCA 35
consensus_9470#1 GCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCA 420
consensus_9470#2 GCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCA 229
** ** * * * * ****************
consensus_9470#0 GCCGTGCAACTGTCGCGGCG-CAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGA 360
consensus_9470#3 GCCGTGCAACTGTCGCGGCGTCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGA 95
consensus_9470#1 GCCGTGCAACTGTCGCGGCG-CAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGA 479
consensus_9470#2 GCCGTGCAACTGTCGCGGCG-CAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGA 288
******************** ************************* *************
consensus_9470#0 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 420
consensus_9470#3 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 155
consensus_9470#1 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 539
consensus_9470#2 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 348
************************************************************
consensus_9470#0 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 480
consensus_9470#3 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 215
consensus_9470#1 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 599
consensus_9470#2 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 408
************************************************************
consensus_9470#0 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 540
consensus_9470#3 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 275
consensus_9470#1 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 659
consensus_9470#2 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 468
************************************************************
consensus_9470#0 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 600
consensus_9470#3 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 335
consensus_9470#1 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 719
consensus_9470#2 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 528
************************************************************
consensus_9470#0 TCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 660
consensus_9470#3 TCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 395
consensus_9470#1 TCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 779
consensus_9470#2 TCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 588
************* **********************************************
consensus_9470#0 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAA 720
consensus_9470#3 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAA 455
consensus_9470#1 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAA 839
consensus_9470#2 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTG------------------ 630
******************************************
consensus_9470#0 ATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTC-CAAC 779
consensus_9470#3 ATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCGTAAG 515
consensus_9470#1 ATCGACA----------------------------------------------------- 846
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 GAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCA 839
consensus_9470#3 TGATCG------------------------------------------------------ 521
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 CTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTC 899
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 GGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTT 959
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 GTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGT 1019
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 GCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGA 1079
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 ACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAAC 1139
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 CGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATAT 1199
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 CTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCATTTTTT 1259
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 ATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACC 1319
consensus_9470#3 ------------------------------------------------------------
consensus_9470#1 ------------------------------------------------------------
consensus_9470#2 ------------------------------------------------------------
consensus_9470#0 ACTACCCTCTTCAAGAATAAACTTTCTTTTATTTCATACTT 1360
consensus_9470#3 -----------------------------------------
consensus_9470#1 -----------------------------------------
consensus_9470#2 -----------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||