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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9479#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1975 fasta sequence
[GTGGCCTTTTTTTTTTTTTTTCGGTTGCAGAGTTCCAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGGGTGTGTTTGTTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCAGATAGTTCTCTCT-GGGAGTTAACAATGAATTTTAACGTGAAAT-TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGA-ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACC--CCAATA---CAACATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGCGACAGTGCGGCACAGTTCAGCACGACCTGTGTCTGATCGTCCGAGCCGGTGACGATGTTACCGACTGCACGAAGCGCGGCCGTCTGTACCTTAACCTCGACGTGCGACAGCAGCGGGATCAGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGTA-T-CTGCTCGTTGCCCCCGTCGGTCAGATAGCTCAGCGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGCATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTGCGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGCTGAATGAAGGACAGCAGCGGCTGCACCCACGCGTCCGC-GGATCACGTAGTCGCGCAGGCTCAGGCCCGTCGCCGATGATGTTGCCCAGGGCCCACACCGCCTGCTCAGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACAGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCNCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTAATACCTCGGGCAATTCT]
[-] EMBL CNS09583 [GTGGCCTTTTTTTTTTTTTTTCGGTTGCAGAGTTCCAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGGGTGTGTTTGTTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCAGATAGTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATTTTTTTTTTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGTTTTAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTG TAATA ]
[+] EMBL CNS09584 [ TTTCGGTTGC GAGTT TAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGGGTGTGTTTGTTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCAGATAGTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCAAAAAAACTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAACATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATA CAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACC CCAGTAGGCCAACAgttctcga ]
[-] EMBL CNS09E7M [ TTATGCAGCAGATAGTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCG ]
[+] EMBL CNS09E7N [ GTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGAAAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATA CAGATATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAAT ]
[+] EMBL CNS096AX [ TCTCTGGGGAGTTAACAATGAATTTTAACGTGAAATCTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTA ]
[-] EMBL BM644244 [ TAGTTTTTCGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATA CAACATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGCGACAGTGCGG ]
[-] EMBL BM597407 [ CGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATA CAACATTGATCACTTGACAGTACTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGcgg ]
[-] EMBL BM604571 [ ATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATA CAACATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCcgg ]
[-] EMBL BM608079 [ AATA CACCATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGCGACAGTGCGTCACAGTTCAGCACGACCTGTGTCTGATCGTCCGAGCCGGTGACGATGTTACCGACTGCACGAAGCGCGGCCGTCTGTACCTTAACCTCGACGTGCGACAGCAGCGGGATCAGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGTA T CTGCTCGTTGCCCCCGTCGGTCAGATAGCTCAGCGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGCATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTGCGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGCTGAATGAAGGACAGCAGCGGCTGCACCCACGCGTCCGC GG ]
[-] EMBL AL930523 [ TCAGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGAAGTGNTGNTCGTTGCCCCCGTCGGTCAGATAGCTCAGGGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGCATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTGCGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGCTGGATGAAGGACAGCAGCGGCTGCA CCACGC CCAGCTTAATCACGTAGTCGCGCAGGCTCAGGCCCGTCGCCGATGATGTTGCCCAGGGCCCACACCGCCTGCTCAGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACAGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCNCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTAATACCTCGGGCAATTCT]
consensusID : consensus_9479#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1259 fasta sequence
[AAAGATAAAGTACACATTCATTGCTTATGCAGCAGATAGTTCTCTCTGGGAGTTAACAATGAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGGACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAACAAAACTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTGACCCATCATCATCATCATCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGTTACGAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCAGCCCGATATTGGGCTGCCGTTCCGACCGCACTAGAACACATGCTTGTTTAT-GCAGAGCATTATACAATCCCTACTG-ATTCCACCAAAATCATTTGCTGGTGAAGATGATATTGTCAAAATAAGTGA-TTACAAGAACAGGACGATT-CTCGCTCATTTGTCCCTAAC-AAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTT-GTTGGGAGATAGCCGAGCAGATGAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGACTGCTGTGACGTACTGGTGGTGTGTCTCTTGCTCGCGGCGAGCGAAACAAACACCACCATAATTGGTTGCTGACGTTCGCTATATTCTTCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATACAACATTGATCACTTGACAGTCCTGGCACATTACAGATCGCAGAACGCGGCACGCACAAAACCTNGGGGGGATT]
[+] EMBL CNS09IUO [AAAGATAAAGTACACATTCATTGCTTATGCAGCAGATAGTTCTCTCTGGGAGTTAACAATGAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGGACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAACAAAACTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTGACCCATCATCATCATCATCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGTTACGAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCAGCCCGATATTGGGCTGCCGTTCCGACCGCACTAGAACACATGCTTGTTTATAGCAGAGCATTATACAATCCCTACTGAATTCCACC ]
[-] EMBL CNS09IUN [ TGGGAGTTAACATTGTATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGGACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAACAAAACTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTGACCCATCATCATCATCATCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGTTACGAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCAGCCCGATATTGGGCTGCCGTTCCGACCGCACTAGAACACATGCTTGTTTAT GCAGAGCATTATACAATCCCTACTG TTTCCACCAAAATCATTTGCTGGTGAAGATGATATTGTCAAAATAAGTGA TTACAAGAACAGGACGATT CTCGCTCATTTGTCCCTAAC AAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTT GTTGGGAGATAGCCGAGCAGATGAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGACTGCTGTGACGTACTGGTGGTGTGTCTCTTGCTCGCGGCGAGCGAAACAAACACCACCATAATTGGTTGCTGACGTTCGCTATATTCTT ]
[-] EMBL AL931356 [ ATGATATTGTC AAATAAGTGATTTACAAGACCAGGACGATTGGTCGCTCATTTGTCCCTTACTGAAGAATNTCTGTGATGCTGCT CTGTTTTGCTATTTCTGCTGTTCGTTGGGAGATA CCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACT GTGGTGTGTCTCTTGCCCGCGGCGAGCG AAC ACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATACAACATTGATCACTTGACAGTCCTGGCACATTACAGATCGCAGAACGCGGCACGCACAAAACCTNGGGGGGATT]
consensusID : consensus_9479#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1015 fasta sequence
[AGGACAGCAGCGGCTGCACCACGCCCAGCTTAATCACGTAGTCGCGCAGGCTCGGCCCGTCGCCGATGATGTTGCCCAGGGCCAACACCGCCTGCTCGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGAGGATTGCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC-AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCGCCGACGCATTTCATCCTGGTCCTTTCCTTTGTTTTTAAAACCCTGCATACGGTTTTTCGACTGGGAATCTATCGACGCCATTTTCGTACGGTGAGGCAAAACTTCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCCCTGACTCACACTCTCGCTTGCACTGCCTAGCGCGCACTCTTTCACACTGTCACAATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTCTCGGCACCGACGGGCAGCAATGGGAAACTGCGAAATCCGAATGGCAGATGGCGAGGTACGAACGCGTGTGCCGTGCTGAACGCGGTTCGCGTTAAACGGCTTTCGATGCTGAGCGTGCTCGTCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATTCGTCACGAAATATGCACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACCTTGCCTGCTCGCACACCCACGCGTCCGCGG]
[-] EMBL BM625454 [AGGACAGCAGCGGCTGCACCACGCCCAGCTTAATCACGTAGTCGCGCAGGCTCGGCCCGTCGCCGATGATGTTGCCCAGGGCCAACACCGCCTGCTCGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGAGGATTGCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCcgg ]
[-] EMBL BM613116 [ GACTAAGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGGGGATTGCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCcgg ]
[-] EMBL BM587030 [ GGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCGCCGACGCATTTCATCCTGGTCCTTTCCTTTGTTTTTAAAACCCTGCATACGGTTTTTCGACTGGGAATCTATCGACGCCATTTTCGTACGGTGAGGCAAAACTTCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCCCTGACTCACACTCTCGCTTGCACTGCCTAGCGCGCACTCTTTCACACTGTCACAATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTCTCGGCACCGACGGGCAGCAATGGGAAACTGCGAAATCCGAATGGCAGATGGCGAGGTACGAACGCGTGTGCCGTGCTGAACGCGGTTCGCGTTAAACGGCTTTCGATGCTGAGCGTGCTCGTCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATTCGTCACGAAATATGCACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACCTTGCCTGCTCGCACACCCACGCGTCCGCGG]
[-] EMBL BM588159 [ ACGACAACAGGCGACGGGCGGCCTGCACCGCCGCCAAGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCGCCGACGCATTTCATCCTGGTCCTTTCCTTTGTTTTTAAAACCCTGCATACGGTTTTTCGACTGGGAATCTATCGACGCCATTTTCGTACGGTGAGGCAAAACTTCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCCCTGACTCACACTCTCGCTTGCACTGCCTAGCGCGCACTCTTTCACACTGTCACAATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTCTCGGCACCGACGGGCAGCAATGGGAAACTGCGAAATCCGAATGGCAGATGGCGAGGTACGAACGCGTGTGCCGTGCTGAACGCGGTTCGCGTTAAACGGCTTTCGATGCTGAGCGTGCTCGTCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATTCGTCACGAAATATGCACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACCTTGCCTGCTCGg ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9479#0 ------------------------------------------------------------
consensus_9479#1 AAAGATAAAGTACACATTCATTGCTTATGCAGCAGATAGTTCTCTCTGGGAGTTAACAAT 60
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 ------------------------------------------------------------
consensus_9479#1 GAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCT 120
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 ---------------------------------GTGGCCT---TTTTTTTTTTTTTTCGG 24
consensus_9479#1 TCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGG 180
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 TTGCAGAGTTCCAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGG 84
consensus_9479#1 ACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAAC 240
consensus_9479#2 -------------AGGACAGCAGC-GGCTGCACCACGCCCAGCTTAAT-CACGTAGTCGC 45
* * * * * *
consensus_9479#0 GTGTGTTTG-TTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCA-GATAGTTCT 142
consensus_9479#1 AAAACTACG-GGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTG-ACCCATCAT 298
consensus_9479#2 GCAGGCTCGGCCCGTCGCCGATGATGTT---GCCCAGGGCCAACACCGCCTGCTCGCACA 102
* * * * * * *
consensus_9479#0 CTCTGGGAGTTAACAATGAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATAC 202
consensus_9479#1 CATCATCA-TCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGT-TAC 356
consensus_9479#2 CGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAG--CGGGACGG------CCCCGGC 154
* * * * * ** *
consensus_9479#0 AAGTACACTATCTATCTTCTGGTTGGC-----TTGTAACCAGTAACGC--------ACAA 249
consensus_9479#1 GAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCA 416
consensus_9479#2 CCGCACCACCTGGTTCGTCTGTGCGGC------CGTGCCGGATGCGAT--------GTTG 200
* * * * *
consensus_9479#0 GCTGAAGGTTAGGCATATCCTGCTAACCG------GACAT---TTTGATGATGGGATGTT 300
consensus_9479#1 GCCCGATATTGGGC-TGCCGTTCCGACCGCACTAGAACACATGCTTGTTTATGCAGAGCA 475
consensus_9479#2 GTGAGCGCCCAGGC---CGCCTCGAACTGC-----AGCAC---CTGGTTGTCGTCCTGCT 249
* *** * ** * ** * * * * *
consensus_9479#0 CAATATACTTCGCGGTAG-------GAAATTAACTAAATACGTCAACGA-AATTACGGGT 352
consensus_9479#1 TTATACAATCCCTACTGATTCCACCAAAATCATTTGCTGGTGAAGATGA-TATTGTCAAA 534
consensus_9479#2 CGAGACAATTGACTA-AGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGAGGA 308
* * * * ** * * * **
consensus_9479#0 TT---TGGTCCTAA----ATCATAAATCATCCTCTTTTGTCCCTAACAAA-GAATTTCTT 404
consensus_9479#1 ATAAGTGATTACAAGAACAGGACGATTCTCGCTCATTTGTCCCTAACAAA-GAATTTCTT 593
consensus_9479#2 TT--GCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCCAGCTGGCCCTCTT 366
* * * * * * * * * ** * ****
consensus_9479#0 TGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAA 464
consensus_9479#1 TGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATGAAAA 653
consensus_9479#2 TGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACT-GTAGTGTGTAG 425
** ****** ** ** * * * * * * * * * * ** *
consensus_9479#0 TTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAG 524
consensus_9479#1 TTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAG 713
consensus_9479#2 TCCTCCTCGT---CGGTCGATTCTGTGGTCTGAGGAACGTTGC-GTCG------------ 469
* ** * * ** *** * *** ** * * *** ****
consensus_9479#0 TCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTT 584
consensus_9479#1 TCCTAAAAGTTGTGTGTTCGTATTCGGAGACTGCTGTGACGTACTGGTGGTGTGTCTCTT 773
consensus_9479#2 -CTTGAGGATCGTCTCTTCGCGTT-------TGTTTTTGCGCAGCTCCACCGTAACCTCC 521
* * * * ** * **** ** ** * * ** * ** *
consensus_9479#0 GCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCC 644
consensus_9479#1 GCTCGCGGCGAGCGAAACAAACACCACCATAATTGGTTGCTGACGTTCGCTATATTCTTC 833
consensus_9479#2 GTTCGTCGCCGACGC-----ATTTCATCCTGGTCCTTTCCTT-TGTTTTTAAAA----CC 571
* ** ** ** * ** * * * ** ** *** * * *
consensus_9479#0 GTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTC 704
consensus_9479#1 GTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTC 893
consensus_9479#2 CTG-CATACGGTTTTTCGA----CTGGGAATCTATCG----ACGCCATTTTCGTACG--- 619
** * * ******** *** * ** * * ***** * * *
consensus_9479#0 GTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTT 764
consensus_9479#1 GTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTC-CGGGGAATGTTCGGATTCTGGTT 952
consensus_9479#2 GTGAGGCAAAACT----TCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCC 675
**** * * * * ******** * * * ** * * * **
consensus_9479#0 GAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAAC 824
consensus_9479#1 GAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAAC 1012
consensus_9479#2 ---CTGACTCACACTCTCGCTTGCA--CTGCCTAGCGCGCACTCTTTCA-CACTGTCACA 729
*** * * ***** ** * * *** * * ** * ****
consensus_9479#0 ATCGTCCGAAAAGAACTGCTCAATGATG-TCATACGCGAGCTTGTAAATTTCGACATTTT 883
consensus_9479#1 ATCGTCCGAAAAGAACTGCTCAATGATG-TCATACGCGAGCTTGTAAATTTCGACATTTT 1071
consensus_9479#2 ATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTC-TCGGCACCGACGG--- 785
** ** **** * * ** * ****** * ****
consensus_9479#0 CGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAA 943
consensus_9479#1 CGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAA 1131
consensus_9479#2 -GCAGCAATGGGAAACTGCGAAATCCGAA----TGGCAGATGGCGAGGTACGAA-CGCG- 838
* ** ***** * * * *** * * ** * * * ** ***
consensus_9479#0 CGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACC--CCAATACAACAT 1001
consensus_9479#1 CGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATACAACAT 1191
consensus_9479#2 TGTGCCGTGC-TGAACGCGGTTCGCGTTAAACG-GCTTTCGATGCT---GAGCGTGCTCG 893
**** *** ** ** * * ** * * * * * ** * *
consensus_9479#0 TGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACG-GCACCGTCG 1060
consensus_9479#1 TGATCACTTGACAGTCCTGGCACATTA-CAGATCGCAGAACG-CGGCACGCACAAAACCT 1249
consensus_9479#2 TCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATT-CGTCACG--AAATATGC 950
* * * * * * ** ** * *** **** * ** **** *
consensus_9479#0 TTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAG 1120
consensus_9479#1 NGGGGGGATT-------------------------------------------------- 1259
consensus_9479#2 ACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACC--TTGCCTGCTCGCACACCCACGCG 1008
* *
consensus_9479#0 GCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGC 1180
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 TCCGCGG----------------------------------------------------- 1015
consensus_9479#0 AGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGG 1240
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 AACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGC 1300
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 GACAGTGCGGCACAGTTCAGCACGACCTGTGTCTGATCGTCCGAGCCGGTGACGATGTTA 1360
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 CCGACTGCACGAAGCGCGGCCGTCTGTACCTTAACCTCGACGTGCGACAGCAGCGGGATC 1420
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 AGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGTATCTGCTCGTTGCCCCCGTCGGTC 1480
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 AGATAGCTCAGCGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGC 1540
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 ATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTG 1600
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 CGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGC 1660
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 TGAATGAAGGACAGCAGCGGCTGCACCCACGCGTCCGCGGATCACGTAGTCGCGCAGGCT 1720
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 CAGGCCCGTCGCCGATGATGTTGCCCAGGGCCCACACCGCCTGCTCAGCACACGTTCGGG 1780
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 GCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACAGGCCCCGGCCCGCACCACCTGGTT 1840
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 CGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCNCCAGGCCGCCTCGAACTGCA 1900
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 GCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTAAT 1960
consensus_9479#1 ------------------------------------------------------------
consensus_9479#2 ------------------------------------------------------------
consensus_9479#0 ACCTCGGGCAATTCT 1975
consensus_9479#1 ---------------
consensus_9479#2 ---------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||