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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9484#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1786 fasta sequence
[CCGAAATAAAAAGCATTCGCACAGCTGTTTGCTGCAAAATTACGAAGCATTTTCGGAAAAAGAAGTTTAAAATAGAAGTGGTAACCCATTTGCGTCGTGAACCGGGGTCCATCCCCGACTGGAAGTAAGATGAACCAACGCTACCTGCTCGTGCTTTGTGCGGTACTGCTTGGCTGCTGTGCACCGTCCTCGGGAGTGTTCTTCAACCACGGTGGCACCTATTTGGGATCGCTCAAGCATCTCTTCAGGAAGTACTCTCATTTGCGCGAGCCGGAACGCCACCTATCGCCAGTTGTTTTCGTACCCGGAGATGGCGGTAG-CAGATGGATGCAATCATCGACAAACCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAACTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCAACATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGACTTTCGCAAGGGACCGACCGAAAATAAAGAGTATTTCCTGCAGCTCAAATT-TTTGGTCGAGCAGACGTACACCATTAACCACG-ACACACCGGTC-ACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGG-CCCAGTGGAAGGCAAAGTACATAAAGCGCGTCAT-TTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC-TGGAGTACCCGAATGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTTACCGCACCCGGTGTGG-AGCTGCACTGTCTGTACGGTAGCAAA-ATCAACACTGTTG-AATCCTT-GGA-TTATCAGAAATCGTACGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGTTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATCGATAACATCGTGAAGCTGCTCCTGTC-GGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTCGTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGTTTAAAAGTGTAG-CTCGTTTGCACTACCAGCCGGTGTATTGCAAACGA-CCACCGCCATGAATCTCAAACCACAAATGTCCACAAGACGGTGCGCATTTACCGTAGCACCTTAGCCTTGTTCTGTTAAAGCAGTTCAATAAAGCAATTTGAAACCA]
[+] EMBL BM647311 [CCGAAATAAAAAGCATTCGCACAGCTGTTTGCTGCAAAATTACGAAGCATTTTCGGAAAAAGAAGTTTAAAATAGAAGTGGTAACCCATTTGCGTCGTGAACCGGGGTCCATCCCCGACTGGAAGTAAGATGAACCAACGCTACCTGCTCGTGCTTTGTGCGGTACTGCTTGGCTGCTGTGCACCGTCCTCGGGAGTGTTCTTCAACCACGGTGGCACCTATTTGGGATCGCTCAAGCATCTCTTCAGGAAGTACTCTCATTTGCGCGAGCCGGAACGCCACCTATCGCCAGTTGTTTTCGTACCCGGAGATGGCGGTAGCCAGATGGATGCAATCATCGACAAACCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAACTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCAACATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGACTTTCGCAAGGGACCGACCGAAAATAAAGAGTATTTC ]
[+] EMBL CNS08H8A [ AATAAAAAGCATTCGCACAGCTGTTTGCTGCAAAATTACGAAGCATTTTCGGAAAAAGAAGTTTAAAATAGAAGTGGTAACCCATTTGCGTCGTGAACCGGGGTCCATCCCCGACTGGAAGTAAGATGAACCAACGCTACCTGCTCGTGCTTTGTGCGGTACTGCTTGGCTGCTGTGCACCGTCCTCGGGAGTGTTCTTCAACCACGGTGGCACCTATTTGGGATCGCTCAAGCATCTCTTCAGGAAGTACTCTCATTTGCGCGAGCCGGAACGCCACCTATCGCCAGTTGTTTTCGTACCCGGAGATGGCGGTAG CAGATGGATGCAATCATCGACAAACCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAGCTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCAACATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGACTTTCGCAAGGGACCGACCGAAAATAAAGAGTAAATCCTGCAGCTCAAATT TTTGGTCGAGCAGACGTACACCATTAACCACG ACACACCGGTC ACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGG CCCAGTGGAAGGCAAAGTACATAAAGCGCGTCAT TTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCA ]
[+] EMBL CNS08SNQ [ ttTTTGCTGCAAAATTACGAAGCATTTTCGGAAAAAGAAGTTTAAAATAGAAGTGGTAACCCATTTGCGTCGTGAACCGGGGTCCATCCCCGACTGGAAGTAAGATGAACCAACGCTACCTGCTCGTGCTTTGTGCGGTACTGCTTGGCTGCTGTGCACCGTCCTCGGGAGTGTTCTTCAACCACGGTGGCACCTATTTGGGATCGCTCAAGCATCTCTTCAGGAAGTACTCTCATTTGCGCGAGCCGGAACGCCACCTATCGCCAGTTGTTTTCGTACCCGGAGATGGCGGTAG CAGATGGATGCAATCATCGACAAACCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAACTCGCCCGGCGCTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCAACATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGACTTTCGCAAGGGACCGACCGAAAATAAAGAGTATTTCCTGCAGCTCAAATT TTTGGTCGAGCAGACGTACACCATTAACCACG ACACACCGGTC ACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGG CCCAGTGGAAGGCAAAGTACATAAAGCGCGTCAT TTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTG ]
[+] EMBL CNS08CHC [ ACG AGCATTTTCGGAAAAAGAAGTTTAAAATAGAAGTGGTAACCCATTTGCGTCGTGAACCGGGGTCCATCCCCGACTGGAAGTAAGATGAACCAACGCTACCTGCTCGTGCTTTGTGCGGTACTGCTTGGCTGCTGTGCACCGTCCTCGGGAGTGTTCTTCAACCACGGTGGCACCTATTTGGGATCGCTCAAGCATCTCTTCAGGAAGTACTCTCATTTGCGCGAGCCGGAACGCCACCTATCGCCAGTTGTTTTCGTACCCGGAGATGGCGGTAG CAGATGGATGCAATCATCGACAAACCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAACTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCAACATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGC ]
[+] EMBL CNS08M3L [ CGGAAAAAGAAGTTTAAAATAGAAGTGGTAACCCATTTGCGTCGTGAACCGGGGTCCATCCCCGACTGGAAGTAAGATGAACCAACGCTACCTGCTCGTGCTTTGTGCGGTACTGCTTGGCTGCTGTGCACCGTCCTCGGGAGTGTTCTTCAACCACGGTGGCACCTATTTGGGATCGCTCAAGCATCTCTTCAGGAAGTACTCTCATTTGCGCGA CCGGAACGCCACCTATCGCCAGTTGTTTTCGTACCCGGAGATGGCGGTAG CAGATGGATGCAATCATCGACAAACCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAACTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCAACATCGC ]
[+] EMBL BX608095 [ ATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGACTTTCGCAAGGGACCGACCGAAAATAAGGAGTATTTCCTGCAGCTCAAATT TTTGGTCGAGCAGACGTACACCATTAACCACG ACACACCGGTC ACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGG CCCAGTGGAAGGCAAAGTACATAAAGCGCGTCAT TTCGCTTGCCGGTGCTTGGGCGGGTAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACCAACCCTTCGCTGGCCTGGCTGCTCCCATCGCCCCTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC TGGAGTACCCGAACGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTCACCGCACCCGGTGTGG AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCATT GGA TTATCAGAAATGGTATGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTT ]
[+] EMBL BX619452 [ tcangATTGTTTGGTCGAGCAGACGTACACCATTAAGCACGAACACACCGGTCTACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGG CCCAGTGGAAGGCAAAGTACATAAAGCGCGTCATGTTCGCTTGCCGGTGCTTGGGCGGGTAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACCAACCCTTCGCTGGCCTGGCTGCTCCCATCGCCCCTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC TGGAGTACCCGANCGGGTGGGAAATGCGCAAAGATNCCCTGCCGTACACGCTTAACTTCACCGCACCCGGTGTGGTAGCTGCACTGTCTGTACGGTAGCAAANATCAACACTGTCGNAATCATTGGGATTTATCAG ]
[+] EMBL BX615911 [ GACGTACACCATTAACCACG ACACACCGGTC ACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACCTCCTGCAGCTACAAACGG CCCAGTGGAAGGCAAAGTACATAAAGCGCGTCAT TTCGCTTGCCGGTGCTTGGGCGGGTAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACCAACCCTTCGCTGGCCTGGCTGCTCCCATCGCCCCTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC TGGAGTACCCGAACGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTCACCGCACCCGGTGTGG AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCATT GGA TTATCAGAAATCGTATGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGTTCCCAGGG ]
[-] EMBL CNS08SNR [ GTC ACCTTTATCGTGCACAGCAT GGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGG CCCAGTGGAAGGCAAAGTACATAAAGCGCGTCAT TTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC TGGAGTACCCGAATGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTTACCGCACCCGGTGTGG AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCCTT GGA TTATCAGAAATCGTACGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGTTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATCGATAACATCGTGAAGCTGCTCCTGTC GGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTCGTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGTTTAAAAGTGTAG CTCGTTTGCACTACCAGCCGGTGTATTGCAAACGA CCACCGCCATGAATCTCAAACCACAAATGTCCACAAGACGGTGCGCATTTACCGTAGCACCTTAGCCTTGTTCTGTTAAAGCAGTTCAATAAAGC ]
[-] EMBL CNS08H8B [ CCTGCAGCTACAAACGGCCCCAGTGGAAGGCAAAGTACATAAAGCGCGTCAT TTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATCTTTTAGTACCCGAATGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTTACCGCACCCGGTGTGG AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCCTT GGA TTATCAGAAATCGTACGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGCTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATCGATAACATCGTGAAGCTGCTCCTGTC GGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTCGTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGTTTAAAAGTGTAG CTCGTTTGCACTACCAGCCGGTGTATTGCAAACGA CCACCGCCATGAATCTCAAACCACAAATGTCCACAAGACGGTGCGCATTTACCGTAGCACCTTAGCCTTGTTCTGTTAAAGCAGTTCAATAAAGC ]
[+] EMBL BX629273 [ GATGCGTGCCGAGCAGATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC TGGAGTACCCGAATGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTTACCGCACCCGGTGTGG AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCCTT GGA TTATCAGAAATCGTACGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGTTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATCGATAACATCGTGAAGCTGCTCCTGTC GGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTCGTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGGTTNAAAGTGTAG CTCGTTTGCACTACCAGCCGGNGTATTGCAAACGA CCACCGCCA ]
[+] EMBL BX629166 [ GATGCGTGCCGAGCAGATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC TGGAGTACCCGAATGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTTACCGCACCCGGTGTGG AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCCTT GGA TTATCAGAAATCGTACGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGTTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATCGATAACATCGTGAAGCTGCTCCTGTC GGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTCGTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGGTTNAAAGTGTAG CTCGTTTGCACTACCAGC ]
[-] EMBL CNS08CHD [ CCGAGCAGATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACACGATGGCACAGATGGAAGAGTTTTTCGAGGATC TGGAGTACCCGAATGGGTGGGAAATGCGCAAAGATTCCCTGCCGTACACGCTTAACTTTACCGCACCCGGTGTGG AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCCTT GGA TTATCAGAAATCGTACGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGTTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATCGATAACATCGTGAAGCTGCTCCTGTC GGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTCGTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGTTTAAAAGTGTAGCCTCGTTTGCACTACCAGCCGGTGTATTGCAAACGAGCCACCGCCATGAATCTCAAACCACAAATGTCCACAAGACGGTGCGCATTTACCGTAGCACCTTAGCCTTGTTCTGTT ]
[-] EMBL CNS08M3M [ AGCTGCACTGTCTGTACGGTAGCAAA ATCAACACTGTTG AATCCTT GGA TTATCAGAAATCGTACGATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTCGCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAGAGTTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATAGATAACATCGTGAAGCTGCTCCTGTCGGGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTCGTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGCTTAGTAGCTTGATTATTGTTTAAAAGTGTAGCCTCGTTTGCACTACCAGCCGGTGTATTGCAAACGA CCACCGCCATGAATCTCAAACCACAAATGTCCACAAGACGGTGCGCATTTACCGTAGCACCTTAGCCTTGTTCTG ]
[+] EMBL BX621582 [ cctGTTTTTTTTTTTTTTTGATAGAGTTACTGTGGTGCCATTATTTGTAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAACTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGTTTAAAAGTGTAG CTCGTTTGCACTACCAGCCGGTGTATTGCAAACGA CCACCGCCATGAATCTCAAACCACAAATGTCCACAAGACGGTGCGCATTTACCGTAGCACCTTAGCCTTGTTCTGTTAAAGCAGTTCAATAAAGCAATTTGAAACCA]
consensusID : consensus_9484#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 777 fasta sequence
[ATCGCCCGAGGTTATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCACATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGACTTTCGCAAGGGACCGACCGAAAATAAAGAGTATTTCCTGCAGCTCAAATTTTTGGTCGAGCAGACGTACACCATTAACCACGACACACCGGTCACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGGCCCAGTGGAAGGCAAAGTACATAAAGCGCGTCATTTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACAACCGTCGCTGGCCTGGCTGGTCCCATCGCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACAACGATGGCACAGATGGAAGAGTTTCGAGGATCCTGGGAAGTANCCCGAAAATTGGGTTGGGAAATNNGCGCAAAGAATTTCCCCTTGCCCGTACACCGCCGTTTACACTTTTANCCGNAACCCCGGTGGTTGAAGCCTGCAACCTGGCTGACCGGTAGCCANAATTCCACAGTTGTNTNATTCCTTGGGATAATCCAGAAAATCGGACAGACATGAGCGGGGAACCATCCTTTAAGATTGGCGCATGGGAANGGACGCAAAACACAGCACAC]
[+] EMBL AL933131 [ATCGCCCGAGGTTATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCACATCGCCAACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGACTTTCGCAAGGGACCGACCGAAAATAAAGAGTATTTCCTGCAGCTCAAATTTTTGGTCGAGCAGACGTACACCATTAACCACGACACACCGGTCACCTTTATCGTGCACAGCATGGGCGCCCCTATGACACTGCACTTCCTGCAGCTACAAACGGCCCAGTGGAAGGCAAAGTACATAAAGCGCGTCATTTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTACGCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAGATCACAACCGTCGCTGGCCTGGCTGGTCCCATCGCACTGTTCTGGAAGCCGAACGAGGTGCTCGCACGGACCCAGTCGCGCGTATACAACGATGGCACAGATGGAAGAGTTTCGAGGATCCTGGGAAGTANCCCGAAAATTGGGTTGGGAAATNNGCGCAAAGAATTTCCCCTTGCCCGTACACCGCCGTTTACACTTTTANCCGNAACCCCGGTGGTTGAAGCCTGCAACCTGGCTGACCGGTAGCCANAATTCCACAGTTGTNTNATTCCTTGGGATAATCCAGAAAATCGGACAGACATGAGCGGGGAACCATCCTTTAAGATTGGCGCATGGGAANGGACGCAAAACACAGCACAC]
consensusID : consensus_9484#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 594 fasta sequence
[CCGCACACTTATCAACCGAAACGCGAGGCCGTAGTGAGTCACGACCCAGTGACTGAGAAGTAAATAAATATAGCAAATTTGCGTAAATGATCGCGCGATGATCGTACCACGTACGAGACGGGGAAATGAACTGGAATGGGCCTTCAACAAAGCGTAAACACGCTGGCACTATGTTGTTGTTTATGACGCTGACTGCCTGGTCATAGGCCTTTTATTCTAAGCAGGTCGTGTACACAAAATTTAAACTAATCGTTATTTTCTTTATCAATTGGATTTTGTCAACTTCTATGTTTTCCGATCGTTCAGTACCTGGCGATGGCGGTAGCCAGATGGATGCAATCATTGACAAGCCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAACTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTT]
[+] EMBL BM613289 [CCGCACACTTATCAACCGAAACGCGAGGCCGTAGTGAGTCACGACCCAGTGACTGAGAAGTAAATAAATATAGCAAATTTGCGTAAATGATCGCGCGATGATCGTACCACGTACGAGACGGGGAAATGAACTGGAATGGGCCTTCAACAAAGCGTAAACACGCTGGCACTATGTTGTTGTTTATGACGCTGACTGCCTGGTCATAGGCCTTTTATTCTAAGCAGGTCGTGTACACAAAATTTAAACTAATCGTTATTTTCTTTATCAATTGGATTTTGTCAACTTCTATGTTTTCCGATCGTTCAGTACCTGGCGATGGCGGTAGCCAGATGGATGCAATCATTGACAAGCCGAACAAGGTTTCGATCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGCGCACCACGTGCAACTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAACGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9484#0 CCGAAATAAAAAGCATTCGCACAGCTGTTTGCTGCAAAATTACGAAGCATTTTCGGAAAA 60
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 AGAAGTTTAAAATAGAAGTGGTAACCCATTTGCGTCGTGAACCGGGGTCCATCCCCGACT 120
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 GGAAGTAAGATGAACCAACGCTACCTGCTCGTGCTTTGTGCGGTACTGCTTGGCTGCTGT 180
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 GCACCGTCCTCGGGAGTGTTCTTCAACCACGGTGGCACCTATTTGGGATCGCTCAAGCAT 240
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 CTCTTCAGGAAGTACTCTCATTTGCGCGAGCCGGAACGCCACCTATCGCCAGTTGTTTTC 300
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 GTACCCGGAGATGGCGGTAGCAGATGGATGCAATCATCGACAAACCGAACAAGGTTTCGA 360
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 TCCTGTGCCAGAAACACACCACCACGTTCTTTAACCTTTGGCTGAACAAGGAACTGCTGC 420
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 TTCCCCTAGTGATCGACTGCTGGATCGACAACATTCGCCTCGAGTACGACAATGTAACGC 480
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 GCACCACGTGCAACTCGCCCGGCGTTACGACGCGCGTGCCAGGCTTCGGTCAGTCGGAAA 540
consensus_9484#1 ----------------------------------------------------------AT 2
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 CGGTCGAATGGATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCAACATCGC-C 599
consensus_9484#1 CGCCCGAGGTTATCGATCCGTCGCACGCGTCGGTCGGTGCGTACTTTGTCA-CATCGC-C 60
consensus_9484#2 ------------------------------------CCGCACACTTATCAACCGAAACGC 24
** **** * * * *
consensus_9484#0 AACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGAC 659
consensus_9484#1 AACGCGCTCGTTTCGAACGGGTACGTGCGGGACAAATCGATCGTTGGCGCACCGTACGAC 120
consensus_9484#2 GAGGCCGTAGTGAGTCACGACCCAGTGACTGAGAAGTAAATAAATATAGCA------AAT 78
* ** * ** *** *** ** ** * ** * *** *
consensus_9484#0 TTTCGCAAGGGACCGACCGAAAATAAAGAGTATTTCCTGCAGCTCAAATTTTTGGTCGAG 719
consensus_9484#1 TTTCGCAAGGGACCGACCGAAAATAAAGAGTATTTCCTGCAGCTCAAATTTTTGGTCGAG 180
consensus_9484#2 TTGCGTAAATGATCGCGCGATGATC----GTACCACGTACGAGACGGGGAAATGAACTGG 134
** ** ** ** ** *** ** *** * * * * ** * *
consensus_9484#0 CAGACGTACACCATTAACCACGA-CACACCGGTCACCT-TTATCGTGCACAGCATGGGCG 777
consensus_9484#1 CAGACGTACACCATTAACCACGA-CACACCGGTCACCT-TTATCGTGCACAGCATGGGCG 238
consensus_9484#2 AATGGGCCTTCAACAAAGCGTAAACACGCTGGCACTATGTTGTTGTTTATGACGCTGACT 194
* * * * ** * * *** * ** * ** * ** * * * *
consensus_9484#0 CCCCTATGACACTGCACTTCCTGCAGCTACAAACGGCCCAGTGGAAGGCAAAGTACATAA 837
consensus_9484#1 CCCCTATGACACTGCACTTCCTGCAGCTACAAACGGCCCAGTGGAAGGCAAAGTACATAA 298
consensus_9484#2 GCCTGGTCATAGG------CCTTTTATTCTAAGCAGGTCGT--GTACACAAAATTTAAAC 246
** * * * *** * ** * * * * * **** * * *
consensus_9484#0 AGCGCGTCATTTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTAC- 896
consensus_9484#1 AGCGCGTCATTTCGCTTGCCGGTGCTTGGGCGGGCAGCGTGAAAGCCTTGAAGGTGTAC- 357
consensus_9484#2 TAATCGTTATTTTCTTTATCAAT-TGGATTTTGTCAACTTCTATGTTTTCCGATCGTTCA 305
*** **** ** * * * ** * * * * ** ** *
consensus_9484#0 GCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAG 956
consensus_9484#1 GCAATCGGCGATGATCTCGGTGCGTTTGCGCTGAGCGGTAAGGTGATGCGTGCCGAGCAG 417
consensus_9484#2 GTACCTGGCGATGG---CGGTA-------GCCAGATGG--ATGCAATCATTGACAAGCCG 353
* * ******* **** ** ** * * ** ** * *** *
consensus_9484#0 ATCACCAACCCGTCGCTGGCCTGGCTGCTCCCATCGCCACTGTTCTGGAAGCCGAACGAG 1016
consensus_9484#1 ATCACAA--CCGTCGCTGGCCTGGCTGGTCCCATCGC-ACTGTTCTGGAAGCCGAACGAG 474
consensus_9484#2 AACAAGGTTTCGATCCTGTGCCAG--AAACACACCACCAC-GTTCTTTAACCT---TTGG 407
* ** ** *** * * * ** * * ** ***** ** * *
consensus_9484#0 GTGCTCGCACGGACCCAGTCGCGCGTATACA-CGATGGCACAGATGGAAGAGTTTTTCGA 1075
consensus_9484#1 GTGCTCGCACGGACCCAGTCGCGCGTATACAACGATGGCACAGATGGAAGAGTTT--CGA 532
consensus_9484#2 CTGAACAAGGAACTGCTGCTTCCCCTAGTGATCGACTGC-TGGATCGACAACATT----C 462
** * * * * * ** * *** ** *** ** * **
consensus_9484#0 GGATCT---GGAGTACCCGAA----TGGGTGGGAAA---TGCGCAAAGATT----CCCTG 1121
consensus_9484#1 GGATCCTGGGAAGTANCCCGAAAATTGGGTTGGGAAATNNGCGCAAAGAATTTCCCCTTG 592
consensus_9484#2 GCCTC-----GAGTACGACAA----TGTAACGCGCACCACGTGCAA----------CTCG 503
* ** **** * ** * * * **** * *
consensus_9484#0 CC-GTACAC----GCTTA-ACTTT--ACCGCA--CCCGGTG--TGGAGC-TGCA--CTGT 1166
consensus_9484#1 CCCGTACACCGCCGTTTACACTTTTANCCGNAACCCCGGTGGTTGAAGCCTGCAACCTGG 652
consensus_9484#2 CCCG-GCGTTACGACGCGCGTGCCAGGCTTCGG--TCAGTCG--GAAACGGTCGAATGGA 558
** * * * * ** * * * * *
consensus_9484#0 CTGTACGGTAGCAAAATCAACACTGTTGAATCCTT-----GGATTATC--AGAAATCGTA 1219
consensus_9484#1 CTGACCGGTAGCCANAATTCCACAGTTGTNTNATTCCTTGGGATAATCCAGAAAATCGGA 712
consensus_9484#2 TCGATCCGTCGC-ACGCGTCGGTCGGTGCGTACTTTT----------------------- 594
* * ** ** * * ** * **
consensus_9484#0 C-GATCTGAGCGGCACACCAGTCCTTAAGATGGGCAATGGCGACGGTACGGTCAATTCTC 1278
consensus_9484#1 CAGACATGAGCGGGGAACCATCCTTTAAGATTGGCGCATGGGAANGGACG-CAAAACACA 771
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 GCTCGCTGGAAGCTTGCCTGCAGTGGACAACGCAACAGAAGCAAACGATCGTTGCCAAAG 1338
consensus_9484#1 GCACAC------------------------------------------------------ 777
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 AGTTCCCAGGGGCCGATCACATGAGCATTCTGGCGGATGTGAACGTTATCGATAACATCG 1398
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 TGAAGCTGCTCCTGTCGGACGTTGCTAACTGAACAGGACACACCCCTACACATACCGTTC 1458
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 GTTTCGAAAGAGGATGGTTTTTTGTTTCTTTGGATAGAGTTACTGTGGTGCCATTATTTG 1518
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 TAGACTACTTCCCCCTCGGAGGATCCTTTCCCTCATAACAAGAAGACTTCGCATACCCAA 1578
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 CTCAACGCAAAGACTCGATAGCTCTAATGTGATGTTTAGTAGCTTGATTATTGTTTAAAA 1638
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 GTGTAGCTCGTTTGCACTACCAGCCGGTGTATTGCAAACGACCACCGCCATGAATCTCAA 1698
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 ACCACAAATGTCCACAAGACGGTGCGCATTTACCGTAGCACCTTAGCCTTGTTCTGTTAA 1758
consensus_9484#1 ------------------------------------------------------------
consensus_9484#2 ------------------------------------------------------------
consensus_9484#0 AGCAGTTCAATAAAGCAATTTGAAACCA 1786
consensus_9484#1 ----------------------------
consensus_9484#2 ----------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||