cluster # 9513

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Anopheles gambiae
cluster # 9513 cluster # 9513 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9513#0 length = 1070 sequences # 4
consensus_9513#1 length = 1068 sequences # 11

consensus_9513#2 length = 428 sequences # 1
consensus_9513#3 length = 187 sequences # 1

consensusID : consensus_9513#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1070
fasta sequence

                              [AAGTCCTGCCTTTCTTTAATTACATCTTGAATATCTAATTCTTCGTAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCAGACCAGCGATAGCAGGACTCGGTGTGGTAGGCTCAATCTCTACCT-GCTCCTCCTCATCCTCCTCAATGTTTAGCTCGATCCCACGCA-CACTCCACTGCAGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAAGACACCAGATGGAAATTGTACCGCCACTGATGATTTCCTGTATTTTGCAGATAGCTTGCCATGTTGCCCGAAATAGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTATCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTCGCCGTGGTAGTGCCTGTCGGAATTCCATCCTGGTCTGCTGACGACGACCGTTCGTCGGAACTGTGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTTCCGCTTCCGCTGGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCTAGGGTGCCGTCCATTTTCACTACAGCGGAGGAAAATGTAAATCGG]

[+] EMBL CNS09JN8             [AAGTCCTGCCTTTCTTTAATTACATCTTGAATATCTAATTCTTCGTAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCAGACCAGCGATA CAGGACTCGGTGTGGTAGGCTCAATCTCTACCT GCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCA CACTCCACTGCAGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTTATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGCCCGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGG                                                                                                                                                                                                                   ]
[+] EMBL CNS08D3Q             [                                                                                                                               GACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCATTAGCCACTGGAACAGTGAAACCCCAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BX606492             [                                                                                                                                                                                                                AGCATAAAGCCGGCCGCCAGTGCAAAATGCGCCAGTTCGAT  CGAGCACGATGAGAATCGAATACCTTGACTCTCTCACCGCCGGCATCAGGATTGTTAGCAGCGCAAAACCGGACAGAAATGCACCGGTGATGACCAGCAGCCACTGAAACAGTGAAACCTGTATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCAGACCAGCGATAGCA GACTCGGTGTGGTAGGCTCAATCTCTACCT GCTCCTCCTCATCCTCCTCAATGTTTAGCTCGATCCCACGCA CACTCCACTGCAGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAAGACACCAGATGGAAATTGTACCGCCACTGATGATTTCCTGTATTTTGCAGATAGCTTGCCATGTTGCCCGAAATAGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTATCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTCGCCGTGGTAGTGCCTGTCGGAATTCCATCCTGGTCTGCTGACGACGACCGTTCGTCGGAACTGTGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTTCCGCTTCCGCTGGCTTCGTTCAT                                                                               ]
[-] EMBL BM597201             [                                                                                                                                                                                                                                                                                                                                                                                                                      GCTAGCGAGTAGCCATAAACGCAGACCAGCGATAGCAGGACTCGGTGTGGTAGGCTCAATCTCTACCTGGCTCCTCCTCATCCTCCTCAATGTTTAGCTCGATCCCACGCACCACTCCACTGCAGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAAGACACCAGATGGAAATTGTACCGCCACTGATGATTTCCTGTATTTTGCAGATAGCTTGCCATGTTGCCCGAAATAGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTATCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTCGCCGTGGTAGTGCCTGTCGGAATTCCATCCTGGTCTGCTGACGACGACCGTTCGTCGGGACTGTGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTTCCGCTTCCGCTGGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCTAGGGTGCCGTCCATTTTCACTACAGCGGAGGAAAATGTAAATCGG]




>consensus_9513#0
AAGTCCTGCCTTTCTTTAATTACATCTTGAATATCTAATTCTTCGTAAGCATTCCAACAA
TCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCG
TCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGCGT
TTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGC
CAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAG
GATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAA
CAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCC
ATAAACGCAGACCAGCGATAGCAGGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCT
CCTCATCCTCCTCAATGTTTAGCTCGATCCCACGCACACTCCACTGCAGGAAGGCCCACA
GTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAAGACACCAGAT
GGAAATTGTACCGCCACTGATGATTTCCTGTATTTTGCAGATAGCTTGCCATGTTGCCCG
AAATAGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGAT
TCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGG
CAATCCGGTCCACCACGATCATGGTATCCACGTTGAAAAACTGTTGATAGTACTCGAGGC
TGAAAATCGAGCCGCCTGGCTTCGCCGTGGTAGTGCCTGTCGGAATTCCATCCTGGTCTG
CTGACGACGACCGTTCGTCGGAACTGTGGAATGATCGTTGCGGTGAATTGATGTTGATTT
GTGCACTTCCGCTTCCGCTGGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAAT
CTTCTAGGGTGCCGTCCATTTTCACTACAGCGGAGGAAAATGTAAATCGG

consensusID : consensus_9513#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1068
fasta sequence

                              [GTAGACGCTTCTTATGTCTAAGCAATTTATTTAATTACATCTTGAATATCTAATTCTTCGTAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA-GACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTG-CA-GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC-C-CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCTTCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCCAA-GTTCCGTCCATTTTCCGGGGCGATTC]

[+] EMBL CNS09J62             [GTAGACGCTTCTTATGTCTAAGCAATTTATTTAATTACATCTTGAATATCTAATTCTTCGTAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCA GCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGATTGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATA CAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTCCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTC                                                                                                                                                            ]
[+] EMBL CNS08D7X             [  caaaGCTTCTTATGTCTAAGCAATTTATTTAATTACATCTTGAATATCTAATTCTTCGTAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCA GCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTTCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATTACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGGGGGAACCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09RLB             [            TATGTCTAAGCAATTTATTTAATTACATCTTGAATATCTAATTCTTCGTAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCA GCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTTCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATA CAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTTATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTTATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGAAAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGAC                                                                                                                                                     ]
[-] EMBL CNS08D7W             [                                                      TCTTCGTAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGTTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCG TTCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCCAA GT                        ]
[-] EMBL CNS09RLA             [                                                                            CCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGT                                                                                                    ]
[+] EMBL AGA281880            [                                                                                             CACAACGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACCACCACGCTGGTGGTAACTTTGTGCAGTGATGGCGTTACCTCCGCAGGCGTTTCTACATCTGGTGCGTGGAAAAAGTAGAGCATAAAGCCGGCCGCCAGTGCAAAATGCGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS09JN7             [                                                                                                  CGTGAATCCACACATTAAGCACTCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCTTCCGCTAGTTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCCAA GGTCCGg                   ]
[-] EMBL CNS08D3P             [                                                                                                                                     CGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCAGGGGAAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTGACAGGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGCGCGCGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGTTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCG TTCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTC                              ]
[-] EMBL CNS09J61             [                                                                                                                                                         TGGTGGTAACTTTGTGCAGCGATGGCGTTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCGCCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGACCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTCCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGACGCTTCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCCAA Ggt                       ]
[-] EMBL BM577310             [                                                                                                                                                                                                                                                                                                                                                                                        CAGTGAAACCTGTATGGTCCAGAGTACGGATACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCA GACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACTG CA GGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTGGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTTCCGCTTCCACTGGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCCAAGGTTCCGTCCATTTTCCGG        ]
[-] EMBL AL932379             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGCTTGCCATGTTGC C CGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCTTCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACAAATCTTCCAA GTTCCGTCCATNACCTCGGGCGATTC]




>consensus_9513#1
GTAGACGCTTCTTATGTCTAAGCAATTTATTTAATTACATCTTGAATATCTAATTCTTCG
TAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCAC
TCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCG
TTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCG
CCAGTGCAAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTTTC
TCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTGATGA
CCAGTAGCCACTGGAACAGTGAAACCTGAATGGTCCAGAGTACGGACACTGGAATGTAGA
TTGCTAGCGAGTAGCCATAAACGCAGACCAGCGATAGCAGACTCGGTGTGGTAGGCTCAA
TCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCCACGCACACTCCACT
GCAGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGATGATGGCGGTGGCCG
AATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGTATTTTGCAGATAGC
TTGCCATGTTGCCCGAAATGGCGATGGTGAAAATCAACGTCAGCACAATCCAGATCGGTC
CATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGACGGGCGCCCGTTTCG
GAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCACGTTGAAAAACTGTT
GATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGAC
TTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTG
AATTGATGTTGATTTGTGCACTGCCGCTTCCGCTAGCTTCGTTCATCAGCGGAAACTCTT
TGAACGACAACAAATCTTCCAAGTTCCGTCCATTTTCCGGGGCGATTC

consensusID : consensus_9513#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 428
fasta sequence

                              [AAATGCGCCGATGCGTGTACAGAATCAAACGGTCAGCAACAAGTGCCAGATCGGTCCCAAGTACCTATAATGCTCGGGAATTTCCGTGCGCTAAATTGCTATTAAGCCTTCCAGTGTAGTTTAGACGGGCGCCCCGGTATTCCGGGAATCATCGAGCGTGGCAAATCCGGGTCCACCACGATCATGGTGTCCACCGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCTTCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACNAATCTTCCAGTTCCGTCNAATCGTGGG]

[-] EMBL AL692658             [AAATGCGCCGATGCGTGTACAGAATCAAACGGTCAGCAACAAGTGCCAGATCGGTCCCAAGTACCTATAATGCTCGGGAATTTCCGTGCGCTAAATTGCTATTAAGCCTTCCAGTGTAGTTTAGACGGGCGCCCCGGTATTCCGGGAATCATCGAGCGTGGCAAATCCGGGTCCACCACGATCATGGTGTCCACCGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCTTCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACNAATCTTCCAGTTCCGTCNAATCGTGGG]




>consensus_9513#2
AAATGCGCCGATGCGTGTACAGAATCAAACGGTCAGCAACAAGTGCCAGATCGGTCCCAA
GTACCTATAATGCTCGGGAATTTCCGTGCGCTAAATTGCTATTAAGCCTTCCAGTGTAGT
TTAGACGGGCGCCCCGGTATTCCGGGAATCATCGAGCGTGGCAAATCCGGGTCCACCACG
ATCATGGTGTCCACCGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCC
TGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTC
GTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCTTCC
GCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACNAATCTTCCAGTTCCGTCNA
ATCGTGGG

consensusID : consensus_9513#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 187
fasta sequence

                              [AAAACGTAGAGCATAAAGCCGGCCGCCAGTGCAAAATGCGCCAGTTCGATCGCGAGCAGGATGAGAATCGAATACCTTGACTTTCTCACCGCCGGCATCAGGATTGTTAGCAGCGCAAAACCGGACAGAAATGCACCGGTGATGACCAGCAGCCACTGAAACAGTGAAACCTGGGGAAAAGGTAGGA]

[-] EMBL AGA280181            [AAAACGTAGAGCATAAAGCCGGCCGCCAGTGCAAAATGCGCCAGTTCGATCGCGAGCAGGATGAGAATCGAATACCTTGACTTTCTCACCGCCGGCATCAGGATTGTTAGCAGCGCAAAACCGGACAGAAATGCACCGGTGATGACCAGCAGCCACTGAAACAGTGAAACCTGGGGAAAAGGTAGGA]




>consensus_9513#3
AAAACGTAGAGCATAAAGCCGGCCGCCAGTGCAAAATGCGCCAGTTCGATCGCGAGCAGG
ATGAGAATCGAATACCTTGACTTTCTCACCGCCGGCATCAGGATTGTTAGCAGCGCAAAA
CCGGACAGAAATGCACCGGTGATGACCAGCAGCCACTGAAACAGTGAAACCTGGGGAAAA
GGTAGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9513#0      ---------------AAGTCCTGCCTTTCTTTAATTACATCTTGAATATCTAATTCTTCG 45
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      GTAGACGCTTCTTATGTCTAAGCAATTTATTTAATTACATCTTGAATATCTAATTCTTCG 60
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      TAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCAC 105
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      TAAGCATTCCAACAATCCGCATATTATCCTAAGCACAACGTGAATCCACACATTAAGCAC 120
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      TCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCG 165
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      TCTTGCTGTGCATCGTCGCATTGACTACCACGCTGGTGGTAACTTTGTGCAGCGATGGCG 180
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      TTACCTCCGCAG-CGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCG 224
consensus_9513#3      -----------------------------------AAAACGTAGAGCATAAAGCCGGCCG 25
consensus_9513#1      TTACCTCCGCAGGCGTTTCTACATCCGGTGCGTGGAAGAAGTAAAGCATAAACCCTGCCG 240
consensus_9513#2      ---AAATGCGCCGATGCGTGTACAGAATCAAACGGTCAGCAACAAGTGCCAGATCGGTCC 57
                                                                  **    *   * * * 

consensus_9513#0      CCAGTGC--AAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTT 282
consensus_9513#3      CCAGTGC--AAAATGCGCCAGTTCGATCGCGAGCAGGATGAGAATCGAATACCTTGACTT 83
consensus_9513#1      CCAGTGC--AAAATGTGCCAGTTCGATCGCGAGCACGATGAGAATCGAATACCTTGACTT 298
consensus_9513#2      CAAGTACCTATAATGCTCGGGAATTTCCGTGCGCTAAATTGCTATTAAGCCTTCCAGTGT 117
                      * *** *  * ****  *  *      ** * **   **    **  *           *

consensus_9513#0      --TCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTG 340
consensus_9513#3      --TCTCACCGCCGGCATCAGGATTGTTAGCAGCGCAAAACCGGACAGAAATGCACCGGTG 141
consensus_9513#1      --TCTCACTGCCGGCATCAGGATTGTTAGCAGCGCAAATCCGGACAGAAATGCACCGGTG 356
consensus_9513#2      AGTTTAGACGGGCGCCCCGGTATTCCGGGAATCATCGAGCGTGGCAAATCCGGGTCCACC 177
                        * *    *   **  * * ***    * * *    * *  * ** *   *   *    

consensus_9513#0      ATGACCA--GTAGCCACTG-----GAACAGTGAAACCTGAATGGTC--CAGAGTACGGAC 391
consensus_9513#3      ATGACCA--GCAGCCACTG-----AAACAGTGAAACCTG---GGGA--AAAGGTAGGA-- 187
consensus_9513#1      ATGACCA--GTAGCCACTG-----GAACAGTGAAACCTGAATGGTC--CAGAGTACGGAC 407
consensus_9513#2      ACGATCATGGTGTCCACCGTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCC 237
                      * ** **  *   **** *      *** **  *   *    *      *   *      

consensus_9513#0      ACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCAGACCAGCGATAGCAGGACTCGG 451
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      ACTGGAATGTAGATTGCTAGCGAGTAGCCATAAACGCAGACCAGCGATAGCAG-ACTCGG 466
consensus_9513#2      GCCTGGCTTTGCCGTAGTAGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGG 297
                                                                                  

consensus_9513#0      TGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCCTCAATGTTTAGCTCGATCCC 511
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      TGTGGTAGGCTCAATCTCTACCTGCTCCTCCTCATCCTCTTCCATGTTCAGCTCGGTCCC 526
consensus_9513#2      TTCGTCGGGACTGAGGAATGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCT 357
                                                                                  

consensus_9513#0      ACGCACACTCCACTGCAGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGAT 571
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      ACGCACACTCCACTGCAGGAAGGCCCACAGTGCGGCGGGAACCAGCAGCGCGTACGTGAT 586
consensus_9513#2      TCCGCTAGCTTCGTTCATCAGCGGAAACTCTTTGAACGACAACNAATCTTCCAGTTCCGT 417
                                                                                  

consensus_9513#0      GATGGCGGTGGCCGAATAAGACACCAGATGGAAATTGTACCGCCACTGATGATTTCCTGT 631
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      GATGGCGGTGGCCGAATAGGAAACCAGATGGAAATTGTACCGCCACTGATGATTTCCCGT 646
consensus_9513#2      CNAATCGTGGG------------------------------------------------- 428
                                                                                  

consensus_9513#0      ATTTTGCAGATAGCTTGCCATGTTGCCCGAAATAGCGATGGTGAAAATCAACGTCAGCAC 691
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      ATTTTGCAGATAGCTTGCCATGTTGCCCGAAATGGCGATGGTGAAAATCAACGTCAGCAC 706
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      AATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGAC 751
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      AATCCAGATCGGTCCATACAAATCCGGATTCGTGGCAATGTTTAGCTTCAGGTAGTTGAC 766
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      GGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTATCCAC 811
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      GGGCGCCCGTTTCGGAATCATCGAGGTGGCAATCCGGTCCACCACGATCATGGTGTCCAC 826
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      GTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTCGCCGTGGT 871
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      GTTGAAAAACTGTTGATAGTACTCGAGGCTGAAAATCGAGCCGCCTGGCTTTGCCGTAGT 886
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      AGTGCCTGTCGGAATTCCATCCTGGTCTGCTGACGACGACCGTTCGTCGGAACTGTGGAA 931
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      AGTGCCCGTCGGACTTCCATCCTGGTCTGCTGACGACGACGGTTCGTCGGGACTGAGGAA 946
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      TGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTTCCGCTTCCGCTGGCTTCGTTCAT 991
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      TGATCGTTGCGGTGAATTGATGTTGATTTGTGCACTGCCGCTTCCGCTAGCTTCGTTCAT 1006
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      CAGCGGAAACTCTTTGAACGACAACAAATCTTCTAGGGTGCCGTCCATTTTCACTACAGC 1051
consensus_9513#3      ------------------------------------------------------------
consensus_9513#1      CAGCGGAAACTCTTTGAACGACAACAAATCTTCCAAGTTCCGTCCATTTTCCGGGGCGAT 1066
consensus_9513#2      ------------------------------------------------------------
                                                                                  

consensus_9513#0      GGAGGAAAATGTAAATCGG 1070
consensus_9513#3      -------------------
consensus_9513#1      TC----------------- 1068
consensus_9513#2      -------------------