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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9518#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1993 fasta sequence
[CCGCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG-TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTACATGCAGCCCTCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAACCATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGAGCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGGTAAATTTCGAGGATTCGTTTGGCGGTGCTGGTTGACTTGAAC-AATGGCGGCACGCCGCAGCATCTTGAGAAGCAACA-GACTGTGCCAG-TTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGCTGGGCAGAAAGTCGATCAGTGTCAAAATCTGCAGCTGCCCGAAGCGTGATATGGAGAAGGACGATAGCAAGGCAACTGGAGGCCGGGAGAATAATAAGAATAAGCGGAAGCATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA-CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA-AGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTGTCAATCCTTTTTTGCCATTTCATCGTATTTCCAATTAAGAATTGTGGTCTAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAACACTTATTTCACCTCC--A--ACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCAAATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATGGAGATACACGGGTAGTGGTTTGCGGAAGAGGGCTATGCTCGAGACATGCCTGTGACACGAGACTAGGGTGGAGACATCTCTCTCTCTAGAGATTCGTACTATAACCGAGCTTATAGTGCACGTACCATGCAGTACAAAATGATGAAAAAATGATGTGAGGTTTCTCAGTTTGCAAATCGAAAAAAGGCAAGAGCCATT]
[+] EMBL BM602220 [CCGCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGCTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTACATGCAGCCCTCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGA ]
[+] EMBL BM618996 [ GCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGCTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTA ]
[+] EMBL BM643809 [ GATCGGTCGCAAATCGGCATCGTTTCCGTATGCTGGTAGAAGTGAAGTTTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCA ]
[+] EMBL BM575914 [ ccgCGCAAATCGGCATCGTTTCCGTATGCTGGTAGAAGTGAAGTTTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTAGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTGGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTCACCTACATGCAGCCCTCGGACTACAGTCGACTGAAGCTGCGTATCATGTTGGT ]
[+] EMBL CNS09BKT [ CTCGTTGTGAAAGTCACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTTGACGTTACCTACATGCAGCCATCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAACCATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGAGCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGG ]
[+] EMBL CNS09QQ8 [ ATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAA ]
[+] EMBL BM578217 [ ccGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAACGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTAGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTTGACGTTACCTACATGCAGCCATCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAACCATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGAGCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGGTAAATTTCGAGGATTCGTTTGGCGGTGCTGGTTGACTTGAAC AATGGCGGCACGCCGCAGCATCTTGAGAAGCAACAGGACTGTGCCAGTTTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGG AAATGAACACGGCACTCTGCTGG ]
[-] EMBL CNS09BKU [ GGAGAAAGGGGTAAATTTCGAGGA TCGTTTGGCGGTGCTGGTTGACTTGAACAAATGGCGGCACGCCGCAGCATCTTGAGAAGCAACA GACTGTGCCAG TTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGCTGGGCAGAAAGTCGATCAGTGTCAAAATCTGCAGCTGCCCGAAGCGTGATATGGAGAAGGACGATAGCAAGGCAACTGGAGGCCGGGAGAATAATAAGAATAAGCGGAAGCATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCAGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAGAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTGTCAATCCTTTTTTGCCATTT ]
[+] EMBL AL932437 [ cccgaggtcACA GACTGTGCCAG TTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGCTGGGCAGAAAGTCGATCAGTGTCAAAATCTGCAGCTGCCCGAAGCGTGATATtg ]
[+] EMBL BM634084 [ ccGAAGCATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA AGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTCTCAATCCTTTTTTGCCATTTCATCGTATTTCCAATTAAGAATTGTGGTCTAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAACACTTATTTCACCTCCCAACCACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCAAATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATG ]
[-] EMBL CNS09QQ9 [ GAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTT GCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAAGCATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA AGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACCGT ]
[+] EMBL BM593199 [ ccgGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA AGGACAAGAATCGATACGCTCAGTACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTCTCAATCCTTTTTTGCCATTTCATCGTTTTTCCAATTCAGAATTGTTGTCCAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAACACTTATTTCACCTCC A ACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCCAATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATGGAGATACACGGGTAGTGGTTTGCGGAAGAGGGCTATGCTCGAGACATGCCTGTGACACGAGACTAGGGTGGAGACATCTCTCTCTCTAGAGATTCGTACTATAACCGAGCTTATAGTGCACGTACCATGCAGTACAAAATGATGAAAAAATGATGTGAGGTTTCTCAGTTTGCAAATCGAAAAAAGGCAAGAGCCATT]
consensusID : consensus_9518#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1159 fasta sequence
[AAGCGGAACATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCGAAAGATGACTCGCCAGTCGAGTGTAGATCTGAAATCAACATTGAACAGCAATATCAATGCTACTACCTCTGCCCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCAGCAGCAGATAACCCCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCGATTCCTCTATGTAGTAGACTGCCCCACCGCGGACACACGTGTACTACGCCACCATCGCGCCAAGAAACGTAATTTAGGGTTGTCATGATGTTTTAGAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAGAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTACGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAACAATAACAAAAGAGAGCAAAAAACAATACAATACAAAAAAACTCCAAAAAGAGACGAAAATCATACGTAAA]
[+] EMBL CNS09EWK [AAGCGGAACATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCGAAAGATGACTCGCCAGTCGAGTGTAGATCTGAAATCAACATTGAACAGCAATATCAATGCTACTACCTCTGCCCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCAGCAGCAGATAACCCCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCGATTCCTCTATGTAGTAGACTGCCCCACCGCGGACACACGTGTACTACGCCACCATCGCGCCAAGAAACGTAATTTAGGGTTGTCATGATGTTTTAGAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAGAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTT ]
[-] EMBL CNS09EWL [ AACAGCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGGTTTTGGCGTGCGCCCCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCGATTCCTCTATGTAGTAAACTGCCCCACCGCGGACACACGTGTACTACGCCACCATCGCGCCAAGAAACGTAATTTAGGGTTGTCATGATGTTTTAGAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAGAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGAATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTAACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTACGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAACAATAAC AAGAGAGCAAAAAACAATACAATACAAAAAAACTCCA ]
[-] EMBL AGA284101 [ TGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTGAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTACGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAAGAATAACAAAAGAGAGCAAAAAACAATACTATACAAAAAATCACCAAAAAGAGACGAAAATCATACGTAAA]
[-] EMBL CNS09RSE [ AGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAAAAGATGCGTCAGTACGCTCCCAATAAACGTTTTTCGTGAAATGAGTAAAACAATAACAA ]
consensusID : consensus_9518#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence
[AAGTGTTACCAATCTGATGTTGGAGCGGCGCCACCATCGCGCTAAGAAACGTAATTTAGGGTTGTCATGATGTTTTACAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAAAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGTTTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGAC]
[+] EMBL AGA285398 [AAGTGTTACCAATCTGATGTTGGAGCGGCGCCACCATCGCGCTAAGAAACGTAATTTAGGGTTGTCATGATGTTTTACAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAAAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGTTTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 CCGCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG 60
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAAT 120
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 GGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAG 180
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 TGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGA 240
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 GATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGA 300
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 TTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTT 360
consensus_9518#1 -AAGCGGAACATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCGAAAGATGACTCG 59
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 GAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGT 420
consensus_9518#1 CCAGTCGAGTGTAGATCTGAAATCAACATTGAACAGCAATATCAATGCTACTACCTCTGC 119
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 GAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCA 480
consensus_9518#1 CCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCAGCAGCAGATAACCCCGCTGCTCGGTC 179
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 TTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGC 540
consensus_9518#1 AGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACA 239
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 CATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTT 600
consensus_9518#1 GCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGG 299
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 GTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTACATGCAGCCCTCGGACTA 660
consensus_9518#1 ATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTA 359
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 CAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAAC 720
consensus_9518#1 TCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGAC 419
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 CATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGA 780
consensus_9518#1 GCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCG 479
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 GCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGGTAAA 840
consensus_9518#1 ATTCCTCTATGTAGTAGACTGCCCCA-CCGCGGACA-CACGTGTACTACGCCAC--CATC 535
consensus_9518#2 ------------------AAGTGTTA-CCAATCTGA-TGTTGGAGCGGCGCCAC--CATC 38
consensus_9518#0 TTTCGAGGATTCGTTTGGCGGTGCTGGTTGACTTGAACAATGGCGGCACGCCGCAGCATC 900
* * * **** * ****
consensus_9518#1 GCGCCAAGAAACGTAATTTAGGGTTGTCAT-GATGTTTTAGAGT--AACTTCATTCTTAA 592
consensus_9518#2 GCGCTAAGAAACGTAATTTAGGGTTGTCAT-GATGTTTTACAGT--AACTTCATTCTTAA 95
consensus_9518#0 TTGAGAAGCAACAGACTGTGCCAGTTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTA 960
* *** *** * * * * ** * * *** * * ** **** *
consensus_9518#1 TTGTGTAAAG---TAACTTAAGAGATGTT----CGATAAGATAAGATAAGCATACTATAG 645
consensus_9518#2 TTGTGTAAAG---TAACTTAAAAGATGTT----CGATAAGATAAGATAAGCATACTATAG 148
consensus_9518#0 CGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGC 1020
** **** * * **** ** * * * ** * *** *
consensus_9518#1 TAAGCATGTC-TCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTC 704
consensus_9518#2 TAAGCATGTC-TCGATGAGGGTTTAATTGTTTGTATCTGTAAAATAACTGATATCATTTC 207
consensus_9518#0 TGGGCAGAAAGTCGATCAGTGTCAAA--ATCTGCAGCTGCCCGAAGCGTGATATGGAGAA 1078
* *** ***** ** ** ** ** * *** * ******
consensus_9518#1 GCATCA----GATGCA--TAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGA 758
consensus_9518#2 GCATCA----GATGCA--TAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGA 261
consensus_9518#0 GGACGATAGCAAGGCAACTGGAGGCCGGGAGAATAATAAGAATAAGCGGAAGCATGCTAA 1138
* * * * *** * * * * *** *** *** *
consensus_9518#1 TAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCG---GCTAG 815
consensus_9518#2 TAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCG---GCTAG 318
consensus_9518#0 TGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGA 1198
* * * * ** *** *** * *** * * ** * *** *
consensus_9518#1 TAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGA 875
consensus_9518#2 TAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGA 378
consensus_9518#0 TCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGC--GAATCGGCG 1256
* * * ** * ** * * * *** * ** * * * *****
consensus_9518#1 ACAAAAGATA-TGTT-TTGATAACA-TACTATAACGATCGAATTAGCAAGTAAGACTTCT 932
consensus_9518#2 ACAAAAGATA-TGTT-TTGATAACA-TACTATAACGATCGAATTAGCAAGTAAGAC---- 431
consensus_9518#0 GCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAA 1316
** * ** * ** ** * * * * * ** ***
consensus_9518#1 GATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACA 992
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 CGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAAC 1376
consensus_9518#1 AAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTA 1052
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 AGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCG 1436
consensus_9518#1 CGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAACAATAACAAAAGAGAGCAAAAAAC 1112
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 TGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGC 1496
consensus_9518#1 AATACAATACAAAAAAACTCCAAAAAGAGACGAAAATCATACGTAAA------------- 1159
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 AAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGG 1556
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 AGTAAGTATGCTTCGAGTCACCGTTAGACTGTCAATCCTTTTTTGCCATTTCATCGTATT 1616
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 TCCAATTAAGAATTGTGGTCTAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAA 1676
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 CACTTATTTCACCTCCAACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCA 1736
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 AATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATGG 1796
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 AGATACACGGGTAGTGGTTTGCGGAAGAGGGCTATGCTCGAGACATGCCTGTGACACGAG 1856
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 ACTAGGGTGGAGACATCTCTCTCTCTAGAGATTCGTACTATAACCGAGCTTATAGTGCAC 1916
consensus_9518#1 ------------------------------------------------------------
consensus_9518#2 ------------------------------------------------------------
consensus_9518#0 GTACCATGCAGTACAAAATGATGAAAAAATGATGTGAGGTTTCTCAGTTTGCAAATCGAA 1976
consensus_9518#1 -----------------
consensus_9518#2 -----------------
consensus_9518#0 AAAAGGCAAGAGCCATT 1993
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||