cluster # 9520

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Anopheles gambiae
cluster # 9520 cluster # 9520 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9520#0 length = 757 sequences # 12

consensus_9520#1 length = 653 sequences # 4
consensus_9520#2 length = 351 sequences # 1

consensusID : consensus_9520#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 757
fasta sequence

                              [CTGTTGGCCTACT--GGCTCTTCCAAAATACGACAAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCGCAATAAAACCACACACACGCACCGTAATTTTGTTAAAGTAACACGAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCCACCCCCCCCCC]

[-] EMBL CNS08UX0             [CTGTTGGCCCACT  GGCTCTTCCAAAATACGACAAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAAAATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAAGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCCTGGTACAACCCGCGCAAGGAGCGCAAGAAG                                                                                                                                                                                                    ]
[+] EMBL CNS0927J             [      GCCTACTGGGGCTCTTCC AAATACGACAAACAAGAGGCACCACGTTTTCGTGCTTGCTT ATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACCGTTTTCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTGAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCGC                                                                                                ]
[+] EMBL CNS091WL             [       CCTACTG GGNGCTTCCAAAATACGACAAACAAGAGGCACCACGTTTTCGTGTTTGCTT ATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAAAATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAAGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCCTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCGCAATAAAACCACACACACGCACCGTga                                                                      ]
[+] EMBL BM585092             [                      CCGAAATACGACAAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGA                                                                                                                                ]
[+] EMBL CNS08HTL             [                                    ACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGCTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAAAATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAAGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGCGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCCTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCGCAATAAAACCACACACACGCACCGTGATTTTGTTAAAGTAACACGAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCCACCCCCCCCCC]
[+] EMBL BM631964             [                                            ccgCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTC                                                                                                                                                          ]
[+] EMBL BM578486             [                                                                                   ccgGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGT                                                                                                                            ]
[-] EMBL CNS0927K             [                                                                                               AGCGCTTACTTTCGAGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACCGTTTTCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTGAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCGCAATAAAACCACACACCCGCACCGTAA       AAA  AAAA  AAAAAAAAAAAAAAAAAAggc                               ]
[+] EMBL BM588848             [                                                                                                           ccgGCGTAAATTACCCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGC                                                                                                           ]
[+] EMBL BX616886             [                                                                                                                                                                                                                                   AACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCGCAATAAAACCACACACACGCACCGTAATT                                                                    ]
[+] EMBL BM653560             [                                                                                                                                                                                                                                                                               ccgGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCGCAATAAAACCACACACACGCACCGTAATTTTGTT                                                               ]
[+] EMBL BX611521             [                                                                                                                                                                                                                                                                                                                                 TGATGGACAAGCTGAATGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCG                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_9520#0
CTGTTGGCCTACTGGCTCTTCCAAAATACGACAAACAAGAGGCACCACGTTTTCGTGTTT
GCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACC
CTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACA
GCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGT
GCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAG
GACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAG
GAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAG
AAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAAG
CACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAAC
CCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAG
TTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGCG
CAATAAAACCACACACACGCACCGTAATTTTGTTAAAGTAACACGAAAAAAAAAAAAAAA
AAAAAAAAAAAGGCCACATGTCCCCCACCCCCCCCCC

consensusID : consensus_9520#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 653
fasta sequence

                              [CCGCGGACGCGTGGGCGACAAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAACGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACTCTCAAACGCTAGTAATCTCCATTGCCTTACCGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATCACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGAACGAACAACTGGAAGGCACTGCTGGCGCAATAA]

[+] EMBL BM617501             [CCGCGGACGCGTGGGCGACAAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAACGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACTCTCAAACGCTAGTAATCTCCATTGCCTTACCGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATCACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGAACGAACAACTGGAAGGC                ]
[+] EMBL BM640239             [               ccgCAAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAACGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACTCTCAAACGCTAGTAATCTCCATTGCCTTACCGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATCACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGAACGAACAACTG                      ]
[+] EMBL BM595579             [                 ccgAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAACGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACTCTCAAACGCTAGTAATCTCCATTGCCTTACCGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATCACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAACGGATGCACTTTATCGATCGAACGAACAACTGGAAGGCACTGCTGGCGCAATAA]
[-] EMBL CNS08HTM             [                                                                                                                                                                                                                                                                                                                                                                                  GAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTTACGGCCAAGCGGGAAAAAGTCATCACGGCGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACGTGAAAACAAAGCGCGACCAGTTCGGCCAGTATCCGGCCTGGTACAACCCGCGCAAGGAGCGCAAAAAG                                                                                                         ]




>consensus_9520#1
CCGCGGACGCGTGGGCGACAAACAAGAGGCACCACGTTTTCGTGTTTGCTTCATACATTT
GTTCGTATTTAACGGTGCAAAGCGCTTACTTTCGAGCGTAAATTACTCTCAAACGCTAGT
AATCTCCATTGCCTTACCGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGA
CGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCGTGCCAAAAACAAGG
TGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGG
GCAATCTGATGGACAAGCTGAAGGATATCACCGAGCAGAAGAAAAAGGAAGAGGAGCTAG
AGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCAGAAAGTGACGGCCA
AGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAAGCACCTGTACAACG
TGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAACCCGCGCAAGGAGC
GCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGAGTTCCGCGGCAAAC
GGATGCACTTTATCGATCGAACGAACAACTGGAAGGCACTGCTGGCGCAATAA

consensusID : consensus_9520#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 351
fasta sequence

                              [CCGGACTATTTCTAGCCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCTAGCGTAGGTGGCCCTCAAACGCTATTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCATAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTT]

[+] EMBL BM630247             [CCGGACTATTTCTAGCCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCTAGCGTAGGTGGCCCTCAAACGCTATTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCATAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTT]




>consensus_9520#2
CCGGACTATTTCTAGCCACGTTTTCGTGTTTGCTTCATACATTTGTTCGTATTTAGCGGT
GCAAAGCGCTTACTTTCTAGCGTAGGTGGCCCTCAAACGCTATTAATCTCCATTGCCTTA
CTGTTTCCGAGTGAATAAAGTACACCGCACAGCCACCAACATGACGGCCCGCTGCAAGAA
ACGCCGCAACCATAACAACGCCATTCGCCGTGCCAAAAACAAGGTGAAGGAGGTAAAGAA
ACTGAAGAAAATGCTCGGCTTCATCGAGGAGGACGTCGGCGAGGGCAATCTGATGGACAA
GCTGAAGGATATTACCGAGCAGAAGAAAAAGGAAGAGGAGCTAGAGCTGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9520#0      CTGTTGGCCTACTGGCTCTTCCAAAATACGACAAACAAGAGGCA-CCACGTTTTCGTGTT 59
consensus_9520#1      --------CCGCGGACGCGT-----GGGCGACAAACAAGAGGCA-CCACGTTTTCGTGTT 46
consensus_9520#2      ------------------------------CCGGACTATTTCTAGCCACGTTTTCGTGTT 30
                                                     *  ** *     * ***************

consensus_9520#0      TGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCGAGCGTAAATTAC 119
consensus_9520#1      TGCTTCATACATTTGTTCGTATTTAACGGTGCAAAGCGCTTACTTTCGAGCGTAAATTAC 106
consensus_9520#2      TGCTTCATACATTTGTTCGTATTTAGCGGTGCAAAGCGCTTACTTTCTAGCGTAGGTGGC 90
                      ************************* ********************* ******  *  *

consensus_9520#0      CCTCAAACGCTAGTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCAC 179
consensus_9520#1      TCTCAAACGCTAGTAATCTCCATTGCCTTACCGTTTCCGAGTGAATAAAGTACACCGCAC 166
consensus_9520#2      CCTCAAACGCTATTAATCTCCATTGCCTTACTGTTTCCGAGTGAATAAAGTACACCGCAC 150
                       *********** ****************** ****************************

consensus_9520#0      AGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCG 239
consensus_9520#1      AGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCAGAACAACGCCATTCGCCG 226
consensus_9520#2      AGCCACCAACATGACGGCCCGCTGCAAGAAACGCCGCAACCATAACAACGCCATTCGCCG 210
                      ****************************************** *****************

consensus_9520#0      TGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGA 299
consensus_9520#1      TGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGA 286
consensus_9520#2      TGCCAAAAACAAGGTGAAGGAGGTAAAGAAACTGAAGAAAATGCTCGGCTTCATCGAGGA 270
                      ************************************************************

consensus_9520#0      GGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAA 359
consensus_9520#1      GGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATCACCGAGCAGAAGAAAAA 346
consensus_9520#2      GGACGTCGGCGAGGGCAATCTGATGGACAAGCTGAAGGATATTACCGAGCAGAAGAAAAA 330
                      ****************************************** *****************

consensus_9520#0      GGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCA 419
consensus_9520#1      GGAAGAGGAGCTAGAGCTGTTGAAGAAAGAAACGTTGGCGGAAATCGTTCAGAAGGAGCA 406
consensus_9520#2      GGAAGAGGAGCTAGAGCTGTT--------------------------------------- 351
                      *********************                                       

consensus_9520#0      GAAAGCGACGGCCAAGCGGGAAAAGTTCATCACGGTGGTCAACCCGAAGACGAACGTAAA 479
consensus_9520#1      GAAAGTGACGGCCAAGCGGGAAAAAGTCATCACGGTGGTCAACCCGAAGACGAACGTAAA 466
consensus_9520#2      ------------------------------------------------------------
                                                                                  

consensus_9520#0      GCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAA 539
consensus_9520#1      GCACCTGTACAACGTGAAAACGAAGCGCGACCAGTTCGGCCAGTATCCGGCGTGGTACAA 526
consensus_9520#2      ------------------------------------------------------------
                                                                                  

consensus_9520#0      CCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGA 599
consensus_9520#1      CCCGCGCAAGGAGCGCAAGAAGCAGATGGTGCGCGAGGGCAAGGACGCCCGACGAAAGGA 586
consensus_9520#2      ------------------------------------------------------------
                                                                                  

consensus_9520#0      GTTCCGCGGCAAACGGATGCACTTTATCGATCGTACGAACAACTGGAAGGCACTGCTGGC 659
consensus_9520#1      GTTCCGCGGCAAACGGATGCACTTTATCGATCGAACGAACAACTGGAAGGCACTGCTGGC 646
consensus_9520#2      ------------------------------------------------------------
                                                                                  

consensus_9520#0      GCAATAAAACCACACACACGCACCGTAATTTTGTTAAAGTAACACGAAAAAAAAAAAAAA 719
consensus_9520#1      GCAATAA----------------------------------------------------- 653
consensus_9520#2      ------------------------------------------------------------
                                                                                  

consensus_9520#0      AAAAAAAAAAAAGGCCACATGTCCCCCACCCCCCCCCC 757
consensus_9520#1      --------------------------------------
consensus_9520#2      --------------------------------------