cluster # 9540

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Anopheles gambiae
cluster # 9540 cluster # 9540 Sequences # 18 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9540#0 length = 1695 sequences # 15

consensus_9540#1 length = 1108 sequences # 3

consensusID : consensus_9540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1695
fasta sequence

                              [CCGCGGACGCGTGGGGTCGTAGCAGTGGCGGCGGCGGCGGTGGTGGTGGCGGTGGCGGACGTTTCCGTTCACGGTCGCCGGTTGGTGGTCGTGGTCGGTATTAAGGCGGAACCGGACCGACGACCGGCGGTTGGGCGCTTGGTGGTTCAAAGTTCTCCCTTAAAACTGTTTGCCAGCCACAGGCTCATGTGTGTGTGTGTGGAAGACAAGGAAAGGCCAATGATGATGAACTAAAGAGAAATAACTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGATAAGGGGCATCACAAAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAGGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCT-CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGT-CGAATTACGTTCAATTGATGTGTACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT-AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGGCATGTGTGTTTTATTGTGAAGAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAAAAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGCGATAGTTTGAGGGAAATAAGTAGGAAAATTGTCCTCGTTTCACAAACTCTTGCGTACAACGGTCGTACAAAGAAGAAGAAGAAGAAGAAGGAGGTGAAATGGTGTTACACACAGTGGCTTCCCCTCTTGCACTAGTTGTGGACAAAAAAAAAAACAGATAATCTCTCGTACTTTTTAGTGCATCATCCACACTTCCTGAGTAAAAACAAAAATGCATCAAAAATTTATGAAAAAAAGATAAATAAAAACATAATAC]

[+] EMBL BM640794             [CCGCGGACGCGTGGGGTCGTAGCAGTGGCGGCGGCGGCGGTGGTGGTGGCGGTGGCGGACGTTTCCGTTCACGGTCGCCGGTTGGTGGTCGTGGTCGGTATTAAGGCGGAACCGGACCGACGACCGGCGGTTGGGCGCTTGGTGGTTCAAAGTTCTCCCTTAAAACTGTTTGCCAGCCACAGGCTCATGTGTGTGTGTGTGGAAGACAAGGAAAGGCCAATGATGATGAACTAAAGAGAAATAACTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGCTTGATAAGGGGCATCACAAAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAGGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX622323             [                                                                                                                     CGACGACCGGCGGTTGGGCGCTTGGTGGTTCAAAGTTCTCCCTTAAAACTGTTTGCCAGCCACAGGCTCATGTGTGTGTGTGTGGAAGACAAGGAAAGGCCAATGATGATGAACTAAAGAGAAATAACTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGATAAGGGGCATCACAAAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAGGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACNAATACTGGTGTACTCTCCTCCCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM600353             [                                                                                                                                                ccgCAAAGTTCTCCCTTAAAACTGTTTGCCAGCCACAGGCTCATGTGTGTGTGTGTGGAAGACAAGAAAAGGCCAATGATGATGAACTAAAGAGAAATAACTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGACAAGGGGCATCACAAAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAGGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTATTCCTCTTCGCCCCACATGTCTCGACGAAACCATTGAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGGTGTACTCTCCT CCCCCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX623742             [                                                                                                                                                                                                                                                                               TGGAACTGTTGTGTATATGGTTTGATAAGGGGCATCACAAAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAGGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTANGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGGTTAGACCACTTGTTTTAGT CGAATTACGTTCAtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM650886             [                                                                                                                                                                                                                                                                                     ccgTGTGTATATGGTTTGACAAGGGGCATCACACAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAGGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTACCTATTCCTCTTCGCCCCACATGTCTCGACGAAACCATTGAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGGTGTACTCTCCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX621977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGT CGAATTACGTTCAATTGATGTGTACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGGCATGTGTGTTTTATTGTGAAGAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX612101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGCTCTACTACAAACACCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGT CGAATTACGTTCAATTGATGTGTACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGGCATGTGTGTTTTATTGTGAAGAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCTATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCCAGGAG                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX620265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCTCTACTACAAACACCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGT CGAATTACGTTCAATTGATGTGTACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGGCATGTGTGTTTTATTGTGAAGAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX611396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGT CGAATTACGTTCAATTGATGTGCACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGACATGTGTGTTTTATTGTGAAAAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGT                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX612133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCATCGTATGGACAACAAATACTGTTGTACTCTCCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGT CGAATTACGTTCAATTGATGTGCACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGACATGTGTGTTTTATTGTGAAAAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGG                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX626977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCT CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGTCCGAATTACGTTCAATTGATGTGTACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGGCATGTGTGTTTTATTGTGAAGAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCTATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAAAAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGCGATAGTTTGAGGGAAATAAGTAGGAAAATTGTCCTCGTTTCACAAACTCTTGCGTACNACGGTCGTACCAAGCAGAAGACGAAGAAGAAGGAAGTGAAATGGTGTTACACACAGTGGCTTCCCCTCTTGCA                                                                                                                             ]
[+] EMBL BX615663             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAATTATCGGAATCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAAGGTTTAGACCACTTGTTTAAGT CGAATTACGTTCAATTGATGTGCACCCCACAGGGTGTGTAGATCATCGTCACGAGGAG TGGGTCCTTAAGTCAATCTTCCGCTAGAGCAATAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX606892             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGT CGAATTACGTTCAATTGATGTGTACCCCACAGGGTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX611436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTGTGTAGATCATCGTCACGAGGAGTTTGTTCCTT AGTCAATCCTTCGCCAGAGCAATAGGATATTCTCCTGAAAAATATAGATTGACATGTGTGTTTTATTGTGAAAAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAAAAGAGATGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGCGATAGTTTGAGGGAAATAAGTAGGAAAATTGTCCTCGTTTCATAAACTCTTGCGTACAACGGTCGTACAAAGAAGAAGAAGAAGAAGAAGGAGGTGAAATGGTGTTACACACAGTGGCTTCCCCTCTTGCACT                                                                                                                           ]
[+] EMBL BX612347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGTAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAAAAGAGAGGAAGAAAGTGCTGATAAAACCACCTCCTCCGACACGTGTAATGTGAAAGAGCGATAGTTTGAGGGAAATAAGTAGGAAAATTGTCCTCGTTTCACAAACTCTTGCGTACAACGGTCGTACAAAGAAGAAGAAGAAGAAGAAGGAGGTGAAATGGTGTTACACACAGTGGCTTCCCCTCTTGCACTAGTTGTGGACAAAAAAAAAAACAGATAATCTCTCGTACTTTTTAGTGCATCATCCACACTTCCTGAGTAAAAACAAAAATGCATCAAAAATTTATGAAAAAAAGATAAATAAAAACATAATAC]




>consensus_9540#0
CCGCGGACGCGTGGGGTCGTAGCAGTGGCGGCGGCGGCGGTGGTGGTGGCGGTGGCGGAC
GTTTCCGTTCACGGTCGCCGGTTGGTGGTCGTGGTCGGTATTAAGGCGGAACCGGACCGA
CGACCGGCGGTTGGGCGCTTGGTGGTTCAAAGTTCTCCCTTAAAACTGTTTGCCAGCCAC
AGGCTCATGTGTGTGTGTGTGGAAGACAAGGAAAGGCCAATGATGATGAACTAAAGAGAA
ATAACTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGATAAG
GGGCATCACAAAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGA
TATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAGG
ATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAA
AAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGT
AAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACAC
CAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTGT
GTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCCA
CAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATT
TGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGT
TGTACTCTCCTCCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGA
ATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGA
ATGTTTAGACCACTTGTTTTAGTCGAATTACGTTCAATTGATGTGTACCCCACAGGGTGT
GTAGATCATCGTCACGAGGAGTTTGTTCCTTAGTCAATCCTTCGCCAGAGCAATAGGATA
TTCTCCTGAAAAATATAGATTGGCATGTGTGTTTTATTGTGAAGAAGCAAATGTAACACA
CCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATA
GCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGTT
TTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTC
GTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAA
AAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGCG
ATAGTTTGAGGGAAATAAGTAGGAAAATTGTCCTCGTTTCACAAACTCTTGCGTACAACG
GTCGTACAAAGAAGAAGAAGAAGAAGAAGGAGGTGAAATGGTGTTACACACAGTGGCTTC
CCCTCTTGCACTAGTTGTGGACAAAAAAAAAAACAGATAATCTCTCGTACTTTTTAGTGC
ATCATCCACACTTCCTGAGTAAAAACAAAAATGCATCAAAAATTTATGAAAAAAAGATAA
ATAAAAACATAATAC

consensusID : consensus_9540#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1108
fasta sequence

                              [CGCCCGAGGTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGACAAAGGGGCATCACAAAGGCCATACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTACGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTATTCCTCTTCGCCCCACATGTCTCGACGAAACCATTGAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCTCCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGTCGAAAAATATAGATTGACATGTGTGTTTTATTGTGAAAAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAAAAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGCGATAGTTTGAGGGAAATAAGTAG]

[+] EMBL AL933231             [CGCCCGAGGTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGACAAAGGGGCATCACAAAGGCCATACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTACGATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTATTCCTCTTCGCCCCACATGTCTCGACGAAACCATTGAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX612623             [                                                                                                                                                                                                                                                                                                                                                                          TCTTCGCCCCACATGTCTCGACGAAACCATTGAGGCAATGAGTCTGTGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACCACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCTCCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACCACTTGTTTTAGTCGAAAAATATAGATTGACATGTGTGTTTTATTGTGAAAAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAAAAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGCGATAGTTTGAGGGAAATAAGTAG]
[+] EMBL BX614631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGTGAAAAAGCAAATGTAACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAATAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAAAAAGAGAGGAAGAAAGTGCTGATAA                                                          ]




>consensus_9540#1
CGCCCGAGGTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGA
CAAAGGGGCATCACAAAGGCCATACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATT
CTAGATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTACGATAGCAGTAGA
AGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTAAAAGTGACAATT
TTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTGTAAAGCCAAGCG
TTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACACCAGTATCTATT
CCTCTTCGCCCCACATGTCTCGACGAAACCATTGAGGCAATGAGTCTGTGTTTAGTGAAC
CTACCCCATTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACCACAGAACGTGCG
AAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACATTTGTCATAAGCG
CCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTGTTGTACTCTCCT
CCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAGAATGAAATTATC
CTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCGAATGTTTAGACC
ACTTGTTTTAGTCGAAAAATATAGATTGACATGTGTGTTTTATTGTGAAAAAGCAAATGT
AACACACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAA
GCAATAGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATA
ACAGTTTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCA
CCACTCGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAA
TACAAAAAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAA
AGAGCGATAGTTTGAGGGAAATAAGTAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9540#0      CCGCGGACGCGTGGGGTCGTAGCAGTGGCGGCGGCGGCGGTGGTGGTGGCGGTGGCGGAC 60
consensus_9540#1      ------------------------------------------------------------
                                                                                  

consensus_9540#0      GTTTCCGTTCACGGTCGCCGGTTGGTGGTCGTGGTCGGTATTAAGGCGGAACCGGACCGA 120
consensus_9540#1      ------------------------------------------------------------
                                                                                  

consensus_9540#0      CGACCGGCGGTTGGGCGCTTGGTGGTTCAAAGTTCTCCCTTAAAACTGTTTGCCAGCCAC 180
consensus_9540#1      ------------------------------------------------------------
                                                                                  

consensus_9540#0      AGGCTCATGTGTGTGTGTGTGGAAGACAAGGAAAGGCCAATGATGATGAACTAAAGAGAA 240
consensus_9540#1      --------------------------------------------------------CGCC 4
                                                                               *  

consensus_9540#0      ATAACTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGATAA- 299
consensus_9540#1      CGAGGTTCAATTAGCATTTAAGCCAAACTAATGGAACTGTTGTGTATATGGTTTGACAAA 64
                        *  *************************************************** ** 

consensus_9540#0      GGGGCATCACAAAGGCCACACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAG 359
consensus_9540#1      GGGGCATCACAAAGGCCATACACAAATGAGAGCCTAGCCCACAGTAGCACCCTATTCTAG 124
                      ****************** *****************************************

consensus_9540#0      ATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAAAAAGGGGTACGCGAAG 419
consensus_9540#1      ATATATATGTGGATCTTTGGTTGTATGTTTTAAGTTCAAACTAC---------------- 168
                      *******************************************                 

consensus_9540#0      GATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTA 479
consensus_9540#1      GATAGCAGTAGAAGCCAAACTATGCGATGATTCAGTTTCGAAAGGAGATTAAGGATTTTA 228
                      ************************************************************

consensus_9540#0      AAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTG 539
consensus_9540#1      AAAGTGACAATTTTAGCTACAAACGAAGCGCTAAACCAGCAGATCTTTAGAGATTGTTTG 288
                      ************************************************************

consensus_9540#0      TAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACA 599
consensus_9540#1      TAAAGCCAAGCGTTTAGAAGTGAACGGAAATAGCCTGACCGGCATGCTCTACTACAAACA 348
                      ************************************************************

consensus_9540#0      CCAGTATCTGTTCCTCTTCGCCCCACATGTCTCGACGAAACCATTTAGGCAATGAGTCTG 659
consensus_9540#1      CCAGTATCTATTCCTCTTCGCCCCACATGTCTCGACGAAACCATTGAGGCAATGAGTCTG 408
                      ********* *********************************** **************

consensus_9540#0      TGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTTGGAGGCAATGAACAAGCC 719
consensus_9540#1      TGTTTAGTGAACCTACCCCATTAACAAAGTGTCTCGAAGCTAGGAGGCAATGAACAAACC 468
                      ***************************************** *************** **

consensus_9540#0      ACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACAT 779
consensus_9540#1      ACAGAACGTGCGAAGCGAATATATATTAGCAATGTAAGCAACTTTCATTTTTGTAAACAT 528
                      ************************************************************

consensus_9540#0      TTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTG 839
consensus_9540#1      TTGTCATAAGCGCCACAAAATGTGAACTACACACACCCATCGTATGGACAACAAATACTG 588
                      ************************************************************

consensus_9540#0      TTGTACTCTCCTCCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAG 899
consensus_9540#1      TTGTACTCTCCTCCCCCATTTGTAATTACAATTATCGGACTCATACTCTGAATTATATAG 648
                      ************************************************************

consensus_9540#0      AATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCG 959
consensus_9540#1      AATGAAATTATCCTTTCGCACTAGGAAAAGGCGTGAAACCTACGTTTACTAATTGGCTCG 708
                      ************************************************************

consensus_9540#0      AATGTTTAGACCACTTGTTTTAGTCGAATTACGTTCAATTGATGTGTACCCCACAGGGTG 1019
consensus_9540#1      AATGTTTAGACCACTTGTTTTAGTCGAA-------------------------------- 736
                      ****************************                                

consensus_9540#0      TGTAGATCATCGTCACGAGGAGTTTGTTCCTTAGTCAATCCTTCGCCAGAGCAATAGGAT 1079
consensus_9540#1      ------------------------------------------------------------
                                                                                  

consensus_9540#0      ATTCTCCTGAAAAATATAGATTGGCATGTGTGTTTTATTGTGAAGAAGCAAATGTAACAC 1139
consensus_9540#1      -----------AAATATAGATTGACATGTGTGTTTTATTGTGAAAAAGCAAATGTAACAC 785
                                 ************ ******************** ***************

consensus_9540#0      ACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAAT 1199
consensus_9540#1      ACCGTTTGGCTATGGCAGTCACAAAATCCGATTAAAGGAAGGGGAAAAAAGTAAAGCAAT 845
                      ************************************************************

consensus_9540#0      AGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGT 1259
consensus_9540#1      AGCAAAACAGCAGTAAAGTGTGGTGCGTGTGTATGTTCGCATCGATAATCTTATAACAGT 905
                      ************************************************************

consensus_9540#0      TTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACT 1319
consensus_9540#1      TTTAGGTTAAATTATTTATGTTGTGTGATCTAAATCTCCCATCCCCTACTCATCACCACT 965
                      ************************************************************

consensus_9540#0      CGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAA 1379
consensus_9540#1      CGTTGCGGGTGGTGCGCACTCGAGGAGAGTTTTCTTGCTGCCAGCTGGATCTCAATACAA 1025
                      ************************************************************

consensus_9540#0      AAAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGC 1439
consensus_9540#1      AAAGAGAGGAAGAAAGTGCTGATAAAACCACCGCCTCCGACACGTGTAATGTGAAAGAGC 1085
                      ************************************************************

consensus_9540#0      GATAGTTTGAGGGAAATAAGTAGGAAAATTGTCCTCGTTTCACAAACTCTTGCGTACAAC 1499
consensus_9540#1      GATAGTTTGAGGGAAATAAGTAG------------------------------------- 1108
                      ***********************                                     

consensus_9540#0      GGTCGTACAAAGAAGAAGAAGAAGAAGAAGGAGGTGAAATGGTGTTACACACAGTGGCTT 1559
consensus_9540#1      ------------------------------------------------------------
                                                                                  

consensus_9540#0      CCCCTCTTGCACTAGTTGTGGACAAAAAAAAAAACAGATAATCTCTCGTACTTTTTAGTG 1619
consensus_9540#1      ------------------------------------------------------------
                                                                                  

consensus_9540#0      CATCATCCACACTTCCTGAGTAAAAACAAAAATGCATCAAAAATTTATGAAAAAAAGATA 1679
consensus_9540#1      ------------------------------------------------------------
                                                                                  

consensus_9540#0      AATAAAAACATAATAC 1695
consensus_9540#1      ----------------