cluster # 9555

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Anopheles gambiae
cluster # 9555 cluster # 9555 Sequences # 18 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9555#0 length = 2174 sequences # 14
consensus_9555#1 length = 745 sequences # 1

consensus_9555#2 length = 619 sequences # 1
consensus_9555#3 length = 546 sequences # 1
consensus_9555#4 length = 543 sequences # 1

consensusID : consensus_9555#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 2174
fasta sequence

                              [TGTNCGGCAGTCTGTGCTCCTTGCAAAACTCCCGCCATCAAAGAAACGAAACGGCTCCCCTTCTTGAGCAGGCCCTTCCTGACGGATTGGCGCGGCTGTGTCTCTCTAAACACATTCCTATCCCTCTAATGCGAGCCAAGAGTACGCCATTCTCGTCGGCTGTTGCACCGTGCACCGTGGTTTGTGTACGGCAACCATTCTGAACCCAACTCATCGTCCTATATTCACTGCAAGCCCTTTTTCATACTTTCGGTAGAAGAAGCTACCGAAGCCGTACACGTCTTGATGTGTATGTGTGAGTGTGTGCGTGTGCTGAATTGATGCCTGCCTTGGCTTAGACTAATACTAATTCTAGTGTATGATACTATTTTATTCTGCTATATAAATTATTAGAACTACGGACGACCTTTGCGTTAGGGAGGAGAGATCCTTTCGGAAGACACTTGGGGTGGGAAAGCGATGACAAAAGAAGGANAAACATANGTTTATAGCTGTTTGGCAGAAAGCTTTGAATGTAAATATTTTGGTCGTTCTGCAAATTGGAATG-AAAAAGANAGAACAATGAAGCGGTATTAGGCAACTAAATTCAAATGAATAATTTACTAAATTTTAACACATCCAACTGTCTTCCGCAAGCTAGACGAGCAATACTCATGCAATAGCAGTAGCTGGTACTTTTGGTCTTTATTATTTTTTACCTTTTATAGTTAGTTTCTCTCATTTTTTTTCTTTTCCTTCGCTCACTTTTATTTACATTACATTTTGTCGAATCGCACGTAAACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAAAAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAGAAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATAGGACAATGTAAAGCAAGCAAACAATGGTGAAAGATGCACGAATTTCACAAAGAATAGGGAAACCGCATAAAACAAGCAAAAAA----AAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTTTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTTTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAACGATGCACAACGATGGAACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATG-TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAG---TTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTT--AAAA--CAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGC--TTTTTTCATGGTTGCAACAATATTCATAGCAAGTTAGGAAAAGGCCTGGGCCGAAGCTAGTTTTGCGCAGCACACGCTACTCTTTTCGTATATTATCGACAAAATCGCCCTTCGCACCGCCGTGGATGCNCGANGGTGCGGCGTCCTCACTTAGGTCTTTACCGAAAATGTATTTTTTTTTTCGTCCACTTTGTCCGTT]

[+] EMBL BX623885             [TGTNCGGCAGTCTGTGCTCCTTGCAAAACTCCCGCCATCAAAGAAACGAAACGGCTCCCCTTCTTGAGCAGGCCCTTCCTGACGGATTGGCGCGGCTGTGTCTCTCTAAACACATTCCTATCCCTCTAATGCGAGCCAAGAGTACGCCATTCTCGTCGGCTGTTGCACCGTGCACCGTGGTTTGTGTACGGCAACCATTCTGAACCCAACTCATCGTCCTATATTCACTGCAAGCCCTTTTTCATACTTTCGGTAGAAGAAGCTACCGAAGCCGTACACGTCTTGATGTGTATGTGTGAGTGTGTGCGTGTGCTGAATTGATGCCTGCCTTGGCTTAGACTAATACTAATTCTAGTGTATGATACTATTTTATTCTGCTATATAAATTATTAGAACTACGGACGACCTTTGCGTTAGGGAGGAGAGATCCTTTCGGAAGACACTTGGGGTGGGAAAGCGATGACAAAAGAAGGANAAACATANGTTTATAGCTGTTTGGCAGAAAGCTTTGAATGTAAATATTTTGGNCGTTCTGCAAATTGGAATG AAAAAGANAGAACAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX622967             [             GTGCTCCTTGCAAAACTCCCGCCATCAAAGAAACGAAACGGCTCCCCTTCTTGAGCAGGCCCTTCCTGACGGATTGGCGCGGCTGTGTCTCTCTAAACACATTCCTATCCCTCTAATGCGAGCCAAGAGTACGCCATTCTCGTCGGCTGTTGCACCGTGCACCGTGGTTTGTGTACGGCAACCATTCTGAACCCAACTCATCGTCCTATATTCACTGCAAGCCCTTTTTCATACTTTCGGTAGAAGAAGCTACCGAAGCCGTACACGTCTTGATGTGTATGTGTGAGTGTGTGCGTGTGCTGAATTGATGCCTGCCTTGGCTTAGACTAATATTAATTCTAGTGTATGATACTATTTTATTCTGCTATATAAATTATTAGAACTACGGACGACCTTTGCGTTAGGGAGGAGAGATCCTTTCGGAAGACACTTGGGGTGGGAAAGCGATGACAAAAGAAGGAGAAACATAAGTTTATAGCTGTTTGGCAGAAAGCTTTGAATGTAAATATTTTGGTCGTTCTGCAAATTGGAATG AAAAAGAGAGAACAATGAAGCGGTATTAGGCAACTAAATTCAAATGAATAATTTACTAAATTTTAACACATCCAACTGTCTTCCGCAAGCTAGACGAGCAATACTCATGCAATAGCAGTAGCTGGTACTTTTGGTCTTTATTATTTTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM626336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccGAAAGCGTTGAATGTAAATATTTTGGTCGTTCTGCAAATTGGAATGAAAAAAAATGGAACAATGAAGCGGTATTAGGCAACTAAATTCAAATGAATAATTTACTAAATTTTAACACTTCCAACTGTCTTCCGCAAGCTGGACGAGCAATACTCATGCAATAGCAGTAGCTGTTACTTTTGTTCTTTATTATTTTTTACCTTTTATAGTTAGTTTCTCTCATTTTTTTTCTTTTCCTTCGCTCACTTTTATTTACATTACATTTTGTCGAATCGCACGTAAACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAAAAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAGAAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATAGGACAATGTAAAGCAAGCAAACAATGGTGAAAGATGCACGAATTTCACAAAGAATAGGGAAACCGCATAAAACAAGCAAAAAA    AAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM621888             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgAAACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAAAAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAGAAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATAGGACAATGTAAAGCAAGCAAACAATGGTGAAAGATGCACGAATTTCACAAAGAATAGGGAAACCGCATAAAACAAGCAAAAAA    AAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTTTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTTTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX622783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGAATAGGGAAACCGCATAAAACAAGCAAAAAA    AANGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTTTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTTTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAACGATGCACAACGATGGGACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATGTTTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX628340             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGAAACCGCATAAAACAAGCAAAAAAAAACAAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATGACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGA       TGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTGTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTTAAACTTCTCTGATTGATTTTTTTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAAAGATGCACAACGATGGAACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCCTTTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTTTCCCTCCCGCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX627743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGATGACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGA       TGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTGTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTTAAACTTCTCTGATTGATTTTTTTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAAAGATGCACAACGATGGAACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCCTTTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTTTCCCTCCCGCAAATG TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAG    GTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAGCGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTA TTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTTAAAAAA  CAAAAACAAAACAAAACGGCTTGTGTGCAACCACTGCACGCAGCACTC G CACACACAGCGTCAG TTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGA                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX623608             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTTTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTTTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAACGATGCACAACGATGGGACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATG TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAGTT TTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATCATCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM641591             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgCAACGATGGAACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCCTTTTGGACCTTACTTTCTGCTTCCATTTCTACAATAATTAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCGCAAATG TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAG   GTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAGCGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTATTTTCTGTAAATAGATCATCTATGATTGTCTCGCT  AAAAATCAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGTCCCATAGGAGAAGGCAGTATGAAGTCAAACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGC  TTTTTTCATGATTGCAACAATATTCATAGCAAGTTAGGAAAAGGCCTGGGCCGAAGCTAGTTTTGCGCAGCACACGCTACTCTTTTCG                                                                                                               ]
[+] EMBL BM632873             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccgCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATG TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAGTT TTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTT  AAAA  CAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGCTTTTTTTTCATGGTTGCAACAATATTCATAGCAAGTTAGGAAAAGGCCTGGGCCGAAGCTAGTTTTGCGCAGCACACGCTACTCTTTTCGTAT                                                                                                            ]
[+] EMBL BX621212             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGGAACGCCTTTTGGACCGNACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATANCATTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX620025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACGCGTTTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATG TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAGTTTTTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTT  AAAA  CAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACNTGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGC  TTTTTTCATGGTTGCAACAATATTCATAGCAAGTTANGAAAAGGCCTGGGCCGAAGCTAGTTTTGCGCAGCACACGCTACTCTTTTCGTATATTATCGACAAAATCGCCCTTCGCACCGCCGTGGATGCNCGANGGTGCGGCG                                                        ]
[+] EMBL BX626028             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATG TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAG   TTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATNTGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTT  AAAA  CAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGC  TTTTTTCATGGTTGCAACAATATTCATAGCAAGTTAGGAAAAGGCCTGGGCCGAAGCTAGTTTTGCGCAGCACACGCTACTCTTTTCGTATATTATCGACAAAATCGCCCTTCGCACCGCCGTGGATGCGCGAGGGTGCGGCGTCCTCACTTAGGTCTTTACCGAAAATGTATTTTTTTTTTCGTCCACTTTGTCCGTT]
[+] EMBL BX610180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATG TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAGTTTTTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTT  AAAA  CAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGC  TTTTTTCATGGTTGCAACAATATTCATAGCAAGTTAGGAAAAGGCCTGGGCCGAAGCTAGTTTTGCGCAGCACACGCTACTCTTTTCGTATATTATCGACAAAATCGCCCT                                                                                        ]




>consensus_9555#0
TGTNCGGCAGTCTGTGCTCCTTGCAAAACTCCCGCCATCAAAGAAACGAAACGGCTCCCC
TTCTTGAGCAGGCCCTTCCTGACGGATTGGCGCGGCTGTGTCTCTCTAAACACATTCCTA
TCCCTCTAATGCGAGCCAAGAGTACGCCATTCTCGTCGGCTGTTGCACCGTGCACCGTGG
TTTGTGTACGGCAACCATTCTGAACCCAACTCATCGTCCTATATTCACTGCAAGCCCTTT
TTCATACTTTCGGTAGAAGAAGCTACCGAAGCCGTACACGTCTTGATGTGTATGTGTGAG
TGTGTGCGTGTGCTGAATTGATGCCTGCCTTGGCTTAGACTAATACTAATTCTAGTGTAT
GATACTATTTTATTCTGCTATATAAATTATTAGAACTACGGACGACCTTTGCGTTAGGGA
GGAGAGATCCTTTCGGAAGACACTTGGGGTGGGAAAGCGATGACAAAAGAAGGANAAACA
TANGTTTATAGCTGTTTGGCAGAAAGCTTTGAATGTAAATATTTTGGTCGTTCTGCAAAT
TGGAATGAAAAAGANAGAACAATGAAGCGGTATTAGGCAACTAAATTCAAATGAATAATT
TACTAAATTTTAACACATCCAACTGTCTTCCGCAAGCTAGACGAGCAATACTCATGCAAT
AGCAGTAGCTGGTACTTTTGGTCTTTATTATTTTTTACCTTTTATAGTTAGTTTCTCTCA
TTTTTTTTCTTTTCCTTCGCTCACTTTTATTTACATTACATTTTGTCGAATCGCACGTAA
ACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAA
AAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAG
AAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATA
GGACAATGTAAAGCAAGCAAACAATGGTGAAAGATGCACGAATTTCACAAAGAATAGGGA
AACCGCATAAAACAAGCAAAAAAAAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAA
ATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAA
AACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGG
GTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTT
TTGTTTTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTT
GGTGTGAGGTAAAACTTCTCTGATTGATTTTTTTTATTATTATTATGAAATGGCAAACAA
ATTACAAGCAAATCAAGCAAAACGATGCACAACGATGGAACGCATACCTTTATAACAGAA
ACCAGGTCTGGTAGGGTGATTGGAACGCGTTTTGGACCGTACTTTCTGCTTCCATTTCTG
CAATAATCAATCAACACTTTGGATAAAGGATAACATTTCAACCTCTCCCTCCCACAAATG
TTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTGATAGTGACAATATATTTATAGTT
TTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACA
GGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAA
TAGATCATCTATGATTGTCTCGTTAAAACAAAAACAAAACAAAACGGCTTGTGTGCAACC
ACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCT
AAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTA
ATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGCTTTTT
TCATGGTTGCAACAATATTCATAGCAAGTTAGGAAAAGGCCTGGGCCGAAGCTAGTTTTG
CGCAGCACACGCTACTCTTTTCGTATATTATCGACAAAATCGCCCTTCGCACCGCCGTGG
ATGCNCGANGGTGCGGCGTCCTCACTTAGGTCTTTACCGAAAATGTATTTTTTTTTTCGT
CCACTTTGTCCGTT

consensusID : consensus_9555#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 745
fasta sequence

                              [GGCAAGAATCGCCACGAGGAAGAAAGTGAACTCGAAGTCCTCTAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTCGTTTTNTCTTATTATTATCCGTTTTTGAGTGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTNTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAACGATGCACAACGATGGGACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTNTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAGGATAACATTTCAACCTCTCCCTCCCACAAATGTTTCACCACAAGCAATTAGAGAGACAGTATNGTGCTGATAGTGACAATATTATTGAGTGAGGTCGACACAGACGCANAGCATAAGGGTAAGNACCAGGGTANAANTTCATAAGTTCGGGCAAGNCAACGCCCACGAACAAAAANCGTCGAAGANAGGCCACAGGGGCAACGAAACGGGCAATTTNCGGCTGGGTCTGATTAACAGCCCGAGAACCAA]

[+] EMBL BX467692             [GGCAAGAATCGCCACGAGGAAGAAAGTGAACTCGAAGTCCTCTAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTCGTTTTNTCTTATTATTATCCGTTTTTGAGTGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTNTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAACGATGCACAACGATGGGACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTNTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAGGATAACATTTCAACCTCTCCCTCCCACAAATGTTTCACCACAAGCAATTAGAGAGACAGTATNGTGCTGATAGTGACAATATTATTGAGTGAGGTCGACACAGACGCANAGCATAAGGGTAAGNACCAGGGTANAANTTCATAAGTTCGGGCAAGNCAACGCCCACGAACAAAAANCGTCGAAGANAGGCCACAGGGGCAACGAAACGGGCAATTTNCGGCTGGGTCTGATTAACAGCCCGAGAACCAA]




>consensus_9555#1
GGCAAGAATCGCCACGAGGAAGAAAGTGAACTCGAAGTCCTCTAAATGGATAACACAAGC
TAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGA
ACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGC
CTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTCGTTTTNTCTTAT
TATTATCCGTTTTTGAGTGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAA
AACTTCTCTGATTGATTTTTNTTATTATTATTATGAAATGGCAAACAAATTACAAGCAAA
TCAAGCAAAACGATGCACAACGATGGGACGCATACCTTTATAACAGAAACCAGGTCTGGT
AGGGTGATTGGAACGCGTTNTTGGACCGTACTTTCTGCTTCCATTTCTGCAATAATCAAT
CAACACTTTGGATAAGGATAACATTTCAACCTCTCCCTCCCACAAATGTTTCACCACAAG
CAATTAGAGAGACAGTATNGTGCTGATAGTGACAATATTATTGAGTGAGGTCGACACAGA
CGCANAGCATAAGGGTAAGNACCAGGGTANAANTTCATAAGTTCGGGCAAGNCAACGCCC
ACGAACAAAAANCGTCGAAGANAGGCCACAGGGGCAACGAAACGGGCAATTTNCGGCTGG
GTCTGATTAACAGCCCGAGAACCAA

consensusID : consensus_9555#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence

                              [CCGCCCACGCGTCCGCTTTTATTTACATTACATTTTGTCGAATCGCACGTAAACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAAAAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAGAAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATAGGACAATGTAAAGCAAGCAAACAATGGTGAAAGATGCACGAATTTCACAAAGAATAGGGAAACCGCATAAAACAAGCAAAAAAAAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTTTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGA]

[+] EMBL BM626756             [CCGCCCACGCGTCCGCTTTTATTTACATTACATTTTGTCGAATCGCACGTAAACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAAAAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAGAAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATAGGACAATGTAAAGCAAGCAAACAATGGTGAAAGATGCACGAATTTCACAAAGAATAGGGAAACCGCATAAAACAAGCAAAAAAAAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATAACACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTTTTCTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGA]




>consensus_9555#2
CCGCCCACGCGTCCGCTTTTATTTACATTACATTTTGTCGAATCGCACGTAAACGTTGTT
GCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAAAAGAAACG
AAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAGAAAGCATA
AAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATAGGACAATG
TAAAGCAAGCAAACAATGGTGAAAGATGCACGAATTTCACAAAGAATAGGGAAACCGCAT
AAAACAAGCAAAAAAAAAGGAAAGCAAGAAAGTGAACTCGAAGTTCCTTAAAATGGATAA
CACAAGCTAAGATAGAACATATATTAAAGAGAAAACCATGAAAAAATAACAAAACAAATA
GAATCGAACAGATAGAACCTGCAAATGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAA
CAATTGCCTATCTGTTACACTGGTGTCCAGTTCCATCGTTTTATTTTATTTTTTGTTTTT
CTTATTATTATCCGTTTTTGATGGAAGATACTTCCAATCACGGTACGCTTTTGGTGTGAG
GTAAAACTTCTCTGATTGA

consensusID : consensus_9555#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 546
fasta sequence

                              [AGCAGATCGCCACGAGGTGTAGTGCTGATAGTGACAATATATTCATAAGTTTTTTTTTTTTTGGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTTAAAACAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGCTTTTNTTCATGGTTGCGAACAATATTCATAGCAAGTNAGGAAAAGGCCTGGGCCGAAGCTAGTTATTAGCGCAGCACACGCTACTCTTGTTCGTAGTATTATCGAGCAAAATCGCCCTTCGCACCGACCGNTGGATG]

[+] EMBL BX466639             [AGCAGATCGCCACGAGGTGTAGTGCTGATAGTGACAATATATTCATAAGTTTTTTTTTTTTTGGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTTAAAACAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGCTTTTNTTCATGGTTGCGAACAATATTCATAGCAAGTNAGGAAAAGGCCTGGGCCGAAGCTAGTTATTAGCGCAGCACACGCTACTCTTGTTCGTAGTATTATCGAGCAAAATCGCCCTTCGCACCGACCGNTGGATG]




>consensus_9555#3
AGCAGATCGCCACGAGGTGTAGTGCTGATAGTGACAATATATTCATAAGTTTTTTTTTTT
TTGGTAGACAGTAAATTATATTGGCAGCACGCCACGACAAACGTCGAAAGCACAGGCACG
AACGGAATTTGTGGTGATAAAGCGAGAACAAATATGCTTATTTTTTTCTGTAAATAGATC
ATCTATGATTGTCTCGTTAAAACAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCA
CGCAGCACACAGACACACACAGAGTCAGTTTTCAAGCGTAAACGCGTGCTCTCTAAGACA
CTGCCCCATAGGAGTAGGCAGTAAGAAGTCAAACGACAAATCGATACACATGTAATAACA
ACGCTCCTTTTCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGCTTTTNTTCATG
GTTGCGAACAATATTCATAGCAAGTNAGGAAAAGGCCTGGGCCGAAGCTAGTTATTAGCG
CAGCACACGCTACTCTTGTTCGTAGTATTATCGAGCAAAATCGCCCTTCGCACCGACCGN
TGGATG

consensusID : consensus_9555#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 543
fasta sequence

                              [CAGGCAGAATCGCCCGAGGTGAGAATAGGAAACTGTAAAGCAATGCAAACAACTGGTGAAAGATGCACGAATTTCACAAAGAATAGNGGACAACCGCATNAAACAAGCAAGAAAAGAAACAAAGGAAAGCAACGAAAGTGAACTCGAAGTTCCTTAAACATGGATGACACAAGCTAAGATAGANACATATATTACCAGAGAAAACCATGAACAAAATAACAAAACAAATAGAATCGAACAGATGCGAAACTGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGNCTATCTGTTACACTGGTGTCCAGTTCCATCGGCTATACTCTACTTTTCTACTTATCCCGGTACAGGTGTACTTTAATTATTAATCCGGTNNTTCTGACTGGAAGAATACCTCTTCCCAAAAATCAACCGCGGTGTATCCGGGCCTCTCTTACGGGACTAGGTGGAAAGCAGGTTTNACAGAAGCCTTTTCCCTTCCTTGGAGTTGGACATTCTTGTCNACTTCTAATTNTACTTTCATCTTCACTTGNACA]

[+] EMBL AL931536             [CAGGCAGAATCGCCCGAGGTGAGAATAGGAAACTGTAAAGCAATGCAAACAACTGGTGAAAGATGCACGAATTTCACAAAGAATAGNGGACAACCGCATNAAACAAGCAAGAAAAGAAACAAAGGAAAGCAACGAAAGTGAACTCGAAGTTCCTTAAACATGGATGACACAAGCTAAGATAGANACATATATTACCAGAGAAAACCATGAACAAAATAACAAAACAAATAGAATCGAACAGATGCGAAACTGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGNCTATCTGTTACACTGGTGTCCAGTTCCATCGGCTATACTCTACTTTTCTACTTATCCCGGTACAGGTGTACTTTAATTATTAATCCGGTNNTTCTGACTGGAAGAATACCTCTTCCCAAAAATCAACCGCGGTGTATCCGGGCCTCTCTTACGGGACTAGGTGGAAAGCAGGTTTNACAGAAGCCTTTTCCCTTCCTTGGAGTTGGACATTCTTGTCNACTTCTAATTNTACTTTCATCTTCACTTGNACA]




>consensus_9555#4
CAGGCAGAATCGCCCGAGGTGAGAATAGGAAACTGTAAAGCAATGCAAACAACTGGTGAA
AGATGCACGAATTTCACAAAGAATAGNGGACAACCGCATNAAACAAGCAAGAAAAGAAAC
AAAGGAAAGCAACGAAAGTGAACTCGAAGTTCCTTAAACATGGATGACACAAGCTAAGAT
AGANACATATATTACCAGAGAAAACCATGAACAAAATAACAAAACAAATAGAATCGAACA
GATGCGAAACTGAAACAAAGCAAAAGTAATTTCTTGGGTTGCCAACAATTGNCTATCTGT
TACACTGGTGTCCAGTTCCATCGGCTATACTCTACTTTTCTACTTATCCCGGTACAGGTG
TACTTTAATTATTAATCCGGTNNTTCTGACTGGAAGAATACCTCTTCCCAAAAATCAACC
GCGGTGTATCCGGGCCTCTCTTACGGGACTAGGTGGAAAGCAGGTTTNACAGAAGCCTTT
TCCCTTCCTTGGAGTTGGACATTCTTGTCNACTTCTAATTNTACTTTCATCTTCACTTGN
ACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TGTNCGGCAGTCTGTGCTCCTTGCAAAACTCCCGCCATCAAAGAAACGAAACGGCTCCCC 60
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TTCTTGAGCAGGCCCTTCCTGACGGATTGGCGCGGCTGTGTCTCTCTAAACACATTCCTA 120
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TCCCTCTAATGCGAGCCAAGAGTACGCCATTCTCGTCGGCTGTTGCACCGTGCACCGTGG 180
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TTTGTGTACGGCAACCATTCTGAACCCAACTCATCGTCCTATATTCACTGCAAGCCCTTT 240
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TTCATACTTTCGGTAGAAGAAGCTACCGAAGCCGTACACGTCTTGATGTGTATGTGTGAG 300
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TGTGTGCGTGTGCTGAATTGATGCCTGCCTTGGCTTAGACTAATACTAATTCTAGTGTAT 360
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      GATACTATTTTATTCTGCTATATAAATTATTAGAACTACGGACGACCTTTGCGTTAGGGA 420
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      GGAGAGATCCTTTCGGAAGACACTTGGGGTGGGAAAGCGATGACAAAAGAAGGANAAACA 480
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TANGTTTATAGCTGTTTGGCAGAAAGCTTTGAATGTAAATATTTTGGTCGTTCTGCAAAT 540
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TGGAATGAAAAAGANAGAACAATGAAGCGGTATTAGGCAACTAAATTCAAATGAATAATT 600
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TACTAAATTTTAACACATCCAACTGTCTTCCGCAAGCTAGACGAGCAATACTCATGCAAT 660
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      AGCAGTAGCTGGTACTTTTGGTCTTTATTATTTTTTACCTTTTATAGTTAGTTTCTCTCA 720
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      --------CCGCCCACGCGTCCGCTTTTATTTACATTACATTTTGTCGAATCGCACGTAA 52
consensus_9555#0      TTTTTTTTCTTTTCCTTCGCTCACTTTTATTTACATTACATTTTGTCGAATCGCACGTAA 780
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAA 112
consensus_9555#0      ACGTTGTTGCACTGTACTGCAGTGATGCAACTGAGAATATTAAAAAGAAAACAATGGAAA 840
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      AAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAG 172
consensus_9555#0      AAGAAACGAAGCAAAACACTGAACGGTAACTGTGGATAAGTGCACTGCCATACTGAGAAG 900
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ---------------------------------CAGGCAGAATCGCCCGAGGTGAGAATA 27
consensus_9555#2      AAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATA 232
consensus_9555#0      AAAGCATAAAAAAGTGAAAAAATAAAGGAAATGAAAAAGAAAATTGGAAAGAAGAGGATA 960
consensus_9555#3      -----------------------------------AGCAGATCGCCACGAGGTGTAGTGC 25
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      GGAAACTGTAAAGCAATGCAAACAACTGGTGAAAGATGCACGAATTTCACAAAGAATAGN 87
consensus_9555#2      GGACAATGTAAAGCAA-GCAAACAA-TGGTGAAAGATGCACGAATTTCACAAAGAATAGG 290
consensus_9555#0      GGACAATGTAAAGCAA-GCAAACAA-TGGTGAAAGATGCACGAATTTCACAAAGAATAGG 1018
consensus_9555#3      TGATAGTGACAATATATTCATAAGTTTTTTTTTTTTTGGTAGACAGTAAATTATATTGGC 85
                                                                                  

consensus_9555#1      ------------------G-GCAAGAATCGCCACGAGGAA-------GAAAGTGAACTCG 34
consensus_9555#4      GGACAACCGCATNAAACAA-GCAAGAAAAGAAACAAAGGAAAGCAACGAAAGTGAACTCG 146
consensus_9555#2      GA--AACCGCATAAAACAA-GCAAAAAAAAAGGAAAGCAA-------GAAAGTGAACTCG 340
consensus_9555#0      GA--AACCGCATAAAACAA-GCAAAAAAAAAGGAAAGCAA-------GAAAGTGAACTCG 1068
consensus_9555#3      AGCACGCCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGA 145
                                          * **  *        *           *    * **    

consensus_9555#1      AAGTCCTCTAAA--TGGATAACACAAGCTA-AGATAGAA-CATATATTAA-AGAGAAAAC 89
consensus_9555#4      AAGTTCCTTAAACATGGATGACACAAGCTA-AGATAGANACATATATTACCAGAGAAAAC 205
consensus_9555#2      AAGTTCCTTAAA-ATGGATAACACAAGCTA-AGATAGAA-CATATATTAA-AGAGAAAAC 396
consensus_9555#0      AAGTTCCTTAAA-ATGGATAACACAAGCTA-AGATAGAA-CATATATTAA-AGAGAAAAC 1124
consensus_9555#3      GAAC-----AAATATGCTTATTTTTTTCTGTAAATAGAT-CATCTATGATTGTCTCGTTA 199
                       *       ***  **  *        **  * *****  *** *** *           

consensus_9555#1      CATGAA-AAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAG 148
consensus_9555#4      CATGAACAAAATAACAAAACAAATAGAATCGAACAGATGCGA-----AACTGAAACAAAG 260
consensus_9555#2      CATGAA-AAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAG 455
consensus_9555#0      CATGAA-AAAATAACAAAACAAATAGAATCGAACAGATAGAACCTGCAAATGAAACAAAG 1183
consensus_9555#3      AAACAAAAACAAAACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACAC-AGACACAC 258
                       *  ** ** * ********   * *  *  ***   *         *    * *** * 

consensus_9555#1      CAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCA 208
consensus_9555#4      CAAAAGTAATTTCTTGGGTTGCCAACAATTGNCTATCTGTTACACTGGTGTCCAGTTCCA 320
consensus_9555#2      CAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCA 515
consensus_9555#0      CAAAAGTAATTTCTTGGGTTGCCAACAATTGCCTATCTGTTACACTGGTGTCCAGTTCCA 1243
consensus_9555#3      ACAGAGTCAGTTTTCAAGC-GTAAACGCGTGC-TCTCTAAGACACTGCCCCATAGGAGTA 316
                        * *** * ** *   *  *  ***   **  * ***   ******      **    *

consensus_9555#1      T-CGTTT-TATTTTATTTTTTCGTTTTNTCTTATTATTATCCGTTTTTGAGTGGAAGATA 266
consensus_9555#4      T-CGGCTATACTCTACTTTTCTACTT------------ATCCCGGTACAGGTG-----TA 362
consensus_9555#2      T-CGTTT-TATTTTATTTTTTGTTTTTCT--TATTATTATCCGTTTTTGA-TGGAAGATA 570
consensus_9555#0      T-CGTTT-TATTTTATTTTTTGTTTTTCT--TATTATTATCCGTTTTTGA-TGGAAGATA 1298
consensus_9555#3      GGCAGTAAGAAGTCAAACGACAAATCGATA-----CACATGTAATAACAA-CGCTCCTTT 370
                        *      *    *         *             **            *     * 

consensus_9555#1      CTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTNTTATT 326
consensus_9555#4      CTTTAATTATTAATCCGGTNNTTCTGACTGGAAGAATACCTCT------TCCCAAAAATC 416
consensus_9555#2      CTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGA----------- 619
consensus_9555#0      CTTCCAATCACGGTACGCTTTTGGTGTGAGGTAAAACTTCTCTGATTGATTTTTTTTATT 1358
consensus_9555#3      TCTTTCCTTACAACTCCCTGACATTGCCCGAAATAGGGCTTTTNTTCATGGTTGCGAACA 430
                        *    *       *  *     **   *  * *     * *                 

consensus_9555#1      ATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAACGATGCACAACGATGG 386
consensus_9555#4      A--ACCGCGGTGTATC----------CGGGCCTCTCTTACGGGACTA--------GGTGG 456
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      ATTATTATGAAATGGCAAACAAATTACAAGCAAATCAAGCAAAACGATGCACAACGATGG 1418
consensus_9555#3      ATATTCATAGCAAGTNAGG-------AAAAGGCCTGGGCCGAAGCTAGTTAT--TAGCGC 481
                                                                                  

consensus_9555#1      GACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTNTTGGAC 446
consensus_9555#4      AAAGCAGGTTTN----ACAGAAGCCTTTTCCCTTCCTTGGAGTTGGACATTCTTGTCNAC 512
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      AACGCATACCTTTATAACAGAAACCAGGTCTGGTAGGGTGATTGGAACGCGTTT-TGGAC 1477
consensus_9555#3      AGCACACGCTACT----CTTGTTCGTAGTATTATCGAGCAAAATCGCCCTTCGCACCGAC 537
                                                                                  

consensus_9555#1      CGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAA-GGATAACATT 505
consensus_9555#4      TTCTAATTNTACTTTCATCTTCACT-TGNACA---------------------------- 543
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      CGTACTTTCTGCTTCCATTTCTGCAATAATCAATCAACACTTTGGATAAAGGATAACATT 1537
consensus_9555#3      CGNTGGATG--------------------------------------------------- 546
                                                                                  

consensus_9555#1      TCAACCTCTCCCTCCCACAAATGTTTCACCACAAGCAATTAGAGAGACAGTATNGTGCTG 565
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TCAACCTCTCCCTCCCACAAATGTTTCACCACAAGCAATTAGAGAGACAGTATTGTGCTG 1597
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ATAGTGACAATAT---TATTGAGTGAGGTCGACACAGACGCANAGCATAAGGGTAAGNAC 622
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      ATAGTGACAATATATTTATAGTTTTTTTTTTTGTAGACAGTAAATTATATTGGCAGCACG 1657
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      CAGGGTANAANTTCATAAGTTCGGGCAAGNC---AACGCCCACGAACAAAAANCGTCGAA 679
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      CCACGACAAACGTCGAAAGCACAGGCACGAACGGAATTTGTGGTGATAAAGCGAGAACAA 1717
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      GANAGGCCACAGGGGCAACGAAACGGGCAATTTNCGGCTGGGTCTGATTAACAGCCCGAG 739
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      ATATGCTTATTTTTTTCTGTAAATAGATCATCTATGATTGTCTCGTTAAAACAAAAACAA 1777
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      AACCAA------------------------------------------------------ 745
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      AACAAAACGGCTTGTGTGCAACCACTCCACGCAGCACACAGACACACACAGAGTCAGTTT 1837
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      TCAAGCGTAAACGCGTGCTCTCTAAGACACTGCCCCATAGGAGTAGGCAGTAAGAAGTCA 1897
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      AACGACAAATCGATACACATGTAATAACAACGCTCCTTTTCTTTCCTTACAACTCCCTGA 1957
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      CATTGCCCGAAATAGGGCTTTTTTCATGGTTGCAACAATATTCATAGCAAGTTAGGAAAA 2017
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      GGCCTGGGCCGAAGCTAGTTTTGCGCAGCACACGCTACTCTTTTCGTATATTATCGACAA 2077
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      ------------------------------------------------------------
consensus_9555#4      ------------------------------------------------------------
consensus_9555#2      ------------------------------------------------------------
consensus_9555#0      AATCGCCCTTCGCACCGCCGTGGATGCNCGANGGTGCGGCGTCCTCACTTAGGTCTTTAC 2137
consensus_9555#3      ------------------------------------------------------------
                                                                                  

consensus_9555#1      -------------------------------------
consensus_9555#4      -------------------------------------
consensus_9555#2      -------------------------------------
consensus_9555#0      CGAAAATGTATTTTTTTTTTCGTCCACTTTGTCCGTT 2174
consensus_9555#3      -------------------------------------