cluster # 9565

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Anopheles gambiae
cluster # 9565 cluster # 9565 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9565#0 length = 1338 sequences # 16

consensus_9565#1 length = 557 sequences # 1
consensus_9565#2 length = 512 sequences # 1

consensusID : consensus_9565#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1338
fasta sequence

                              [CCGCACGAATCTAAACATTAAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG-T-CG-CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA-GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC-GGTAT-GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG-TGGAAATCGATGACCTATTA-CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG-AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC-GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCATTGTCTAGCATA]

[+] EMBL BM649835             [CCGCACGAATCTAAACATTAAAAATGGTTTCGAGAAACCTCTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG TCCG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAACAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTTGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGTTGAAATATCCGTACGTTCAACCACCCTATACGCTAGTGCTTG AAATGAAAGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08PIX             [                   AAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS0902E             [                aaccAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCC                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08TY2             [                     AAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACT                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08JUC             [                       ATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG T CGACTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTCGAAGACGATGAAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX606792             [                             TCGAGAAACCTCTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAG TCCG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAACAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTTGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM594418             [                              ccgGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGTCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGCC CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCTTGTCCGCTTTCTGTGTGTACACGGGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCACTGAAATATCCGTACGTTCAACCACCCTATACTCTTGTGCTTGAAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM645838             [                              ccgGAAACCTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGTCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGCC CG CTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTC TTTCTGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCTTGTCCGCTTTCTGTGTGTACACGGGTATGGGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTACCCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCACTGAAATATCCGTACGTTCAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS0902F             [                                                                                                                                                                                                                                                                                                                                                                          AAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTATTA CCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCATTGTCT      ]
[+] EMBL CNS09O7H             [                                                                                                                                                                                                                                                                                                                                                                                     CGGAAGGAGGAGGAGGCAGAGAA GGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTAC C GGTAT GGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGACGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATG TGGAAATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS095DQ             [                                                                                                                                                                                                                                                                                                                                                                                                    GCAGAGAA GGAATCTTTTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACAC GGTAT GGGTGTTTGGTGCGCCTGACCTTTTTTTTTAGGGTAACATTATCGTCGACGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTA GATGATGGAAATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGACGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS095DR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGCGCCTGACCGAGACGCAGAGGGTAAAATTATCGTCGACGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATG TGGAAATCGATGACCTTTTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAATTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGAAAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09O7I             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCGATGACCTATTA CCAAAAAATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCC GGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGGTCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAGATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTGCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGAATCAGCGATGGAGACCGAGTTGTGTGGGTGGCGGACGCTAGATACGat                                                          ]
[-] EMBL CNS08PIY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTG AAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCAAACTGGCTGGCGTTTCAAGAAGCGTCCC AGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCATAGACAAGCATA]
[-] EMBL CNS08JUD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGTCCCGGGCGTCGACAAGTTCCTTGAAACGCTGGCAAAAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCAT           ]
[-] EMBL CNS08TY3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAAGATGGACGCAAAATATGAAATTGTAGTGTTCACCGCCGATCAAGGGATAACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCGTTATCAT           ]




>consensus_9565#0
CCGCACGAATCTAAACATTAAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCA
GACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGC
AGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTCGCTTCCATCTAA
ATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCTCTT
TTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACCGCA
GTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCA
AGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAAGTT
CGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGTGTT
TGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCC
CACCTTTCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCAAAAAATGAT
CCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTTCAACC
ACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTATCA
AACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTGGCCGC
AAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGA
CGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGT
CGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTGATCGT
TGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATACCGCG
CTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTGACGAT
TGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTTGAAAA
TCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAACGGGA
GCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTTCTGGG
TGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATTTGCCG
TTATCATTGTCTAGCATA

consensusID : consensus_9565#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 557
fasta sequence

                              [GAATCGCCCGAGGCGAGAAACTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTCCGCTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAA]

[+] EMBL AL932832             [GAATCGCCCGAGGCGAGAAACTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTCCGCTTCCATCTAAATGGATCCGGTCGTACTGTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAA]




>consensus_9565#1
GAATCGCCCGAGGCGAGAAACTGTTCGACTTTCTTCGTTTCAGACAATTTTATCAATTTC
AAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGCAGTACTGTCAGTCTAAAC
AAGGATACGTGAAGGCTTGGGACGCCAGTCCGCTTCCATCTAAATGGATCCGGTCGTACT
GTACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCTCTTTTCGGCTGTTTCTGGAA
AAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACCGCAGTTGCTTTCAAAGCTAT
TCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCAGCAAGAGAAGCATCGGAAGG
AGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAAGTTCGGATTCGTCTTCTTTG
GATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGACCGAG
ACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATT
TCCGTAGGATGTGGAAA

consensusID : consensus_9565#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 512
fasta sequence

                              [ATCGCACGAGGTTNATCGTCTTCTTTGGATTTTCCGTGTCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGATCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGGAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATC]

[+] EMBL AL930686             [ATCGCACGAGGTTNATCGTCTTCTTTGGATTTTCCGTGTCGCTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGATCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCAAAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGGAATATCCGTACGTTCAACCACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACACTTTGTCGATGGTCATCATGTGAAAAATC]




>consensus_9565#2
ATCGCACGAGGTTNATCGTCTTCTTTGGATTTTCCGTGTCGCTTTCTGTGTGTACACGGT
ATGGGTGTTTGGTGCGCCTGATCGAGACGCAGAGGGTAACATTATCGTCGATGAGTTCAT
GGAACTGCCCACCTTTCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCA
AAAAATGATTCAAGAACCGTCACGCGAAAAACTATTGCCCGACCCGCTGGAATATCCGTA
CGTTCAACCACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTG
GACCTACCAAACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAAC
GCTGGCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCC
GATACTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTAC
ACACTTTGTCGATGGTCATCATGTGAAAAATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9565#0      CCGCACGAATCTAAACATTAAAAATGATTTCGAGAAACCTGTTCGACTTTCTTCGTTTCA 60
consensus_9565#1      -----------GAATCGCCCGAGG------CGAGAAAC-TGTTCGACTTTCTTCGTTTCA 42
consensus_9565#2      -------------ATCGCACGAGGT-----TNATCGTCTTCTTTGGATTT-TCCGTGTCG 41
                                   * *     *          *    * * ** *  *** * *** ** 

consensus_9565#0      GACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGC 120
consensus_9565#1      GACAATTTTATCAATTTCAAACAATTTCAGCCTCTTCGCTGTATGGCACAAATCGCGCGC 102
consensus_9565#2      ------CTTTCTGTGTGTACACGGTATGGGTGTTTGGTGCGCCTGAT-CGAGACGCAGAG 94
                             **      *  * **  * *  *  * *     *  **   * *  ***    

consensus_9565#0      AGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTC-GCTTCCATCTA 179
consensus_9565#1      AGTACTGTCAGTCTAAACAAGGATACGTGAAGGCTTGGGACGCCAGTCCGCTTCCATCTA 162
consensus_9565#2      GGTAACATTATCGTCGATGAGTTCATGGAACTGCCCACCTTTCAGCAATATTTCCGTAGG 154
                       ***   * *   *  *  **   * *  *  **        *        **** *   

consensus_9565#0      A-ATGGATCCGGTCGTACTGT-ACCTCGGCCAAATTTCTGCACTGCCGGCAAGTTCGGCT 237
consensus_9565#1      A-ATGGATCCGGTCGTACTGT-ACCTCGGCCAAATTTCTGCACTGCCGGCATGTTCGGCT 220
consensus_9565#2      ATGTGGAAATCGATGACCTATTACCAAAAAATGATTCAAGAACCGTCA-CGCGAAAAACT 213
                      *  ****    *  *  ** * ***        ***   * ** * *  *  *     **

consensus_9565#0      CTTTTCGGCTGTTTCTGGAAAAGGTTCTAGCAACGAACAACAGCAGAATGCTCCCACACC 297
consensus_9565#1      CTTTTCGGCTGTTTCTGGAAAAGGTTCTGGCAACGAACAACAGCAGAATGCTCCCACACC 280
consensus_9565#2      ATTGCCCGAC-CCGCTGGAATA---TCCGT--ACGTTCAACCACCCTATACGCTTGTGC- 266
                       **  * *      ****** *   **     ***  ****  *   ** * *     * 

consensus_9565#0      GCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCA 357
consensus_9565#1      GCAGTTGCTTTCAAAGCTATTCCCTCAAACCGCCGTTGAAGGTACGGAAAATGAACAGCA 340
consensus_9565#2      ----TTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACCTACC-AAACTGGCTGGCG 321
                          ***   * **** * * *    * ***     ** *  ***  *** **    ** 

consensus_9565#0      GCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAA 417
consensus_9565#1      GCAAGAGAAGCATCGGAAGGAGGAGGAGGCAGAGAAGGAATCATCTTGGAAGAGGATGAA 400
consensus_9565#2      TTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTGGCC--GCAAACTATGAA 379
                           ****** **     *  **  **       *        *   * * *  *****

consensus_9565#0      GTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGT 477
consensus_9565#1      GTTCGGATTCGTCTTCTTTGGATTTTCCGTGTCCGCTTTCTGTGTGTACACGGTATGGGT 460
consensus_9565#2      ATT----------------GTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGAT 423
                       **                * * * * *    *** *    *  **     * *   * *

consensus_9565#0      GTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTAT-CGTCGATGAGTTCATGGAAC 536
consensus_9565#1      GTTTGGTGCGCCTGACCGAGACGCAGAGGGTAACATTAT-CGTCGATGAGTTCATGGAAC 519
consensus_9565#2      ACTGGACGCTCTTGATC------CTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGC 477
                        * *  ** * *** *      *   ***  **** **    ** *  **    *   *

consensus_9565#0      TGCCCACCTT-TCAGCAATATTTCCGTAGGATGTGGAAATCGATGACCTATTACCAAAAA 595
consensus_9565#1      TGCCCACCTT-TCAGCAATATTTCCGTAGGATGTGGAAA--------------------- 557
consensus_9565#2      TACACACTTTGTCGATGGTCATCATGTGAAAAATC------------------------- 512
                      * * *** ** **     *  *   **   *  *                          

consensus_9565#0      ATGATCCAAGAACCTTCACGCGAAAAACTATTGCCCGACCCGCTGAAATATCCGTACGTT 655
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      CAACCACCCTATACGCTTGTGCTTGAAATGAAAGATGTGCTGGTACACCCAGACTGGACC 715
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      TATCAAACTGGCTGGCGTTTCAAGAAGCGTCCCGGCGTCGACAAGTTCCTTGAAACGCTG 775
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      GCCGCAAACTATGAAATTGTAGTGTTCACCGCCGATCAAGGGATGACAGTGTTCCCGATA 835
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      CTGGACGCTCTTGATCCTCGGGGCTACATAATGTACCGTTTGGTGAGGGATGCTACACAC 895
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      TTTGTCGATGGTCATCATGTGAAAAATCTGGACAACCTAAACCGAGACCTAAGTAAAGTG 955
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      ATCGTTGTCGATTGGGATCCAAACTCTACCAAACTGCACCCGGAGAATACCCTAAACATA 1015
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      CCGCGCTGGACCGGTAACGATGACGATGCTGGGCTGTTCGATCTTATGGCTATGCTGGTG 1075
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      ACGATTGCTACGAGCGAGGTTGAAGATGTACGTGATGTGATGACTTATTACAAATCGTTT 1135
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      GAAAATCCATTAGTAAAATTCCGCGAAAATCAGCGTCTCCTAGCTGAACAAATGGCCGAA 1195
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      CGGGAGCACGAGGAAAAGCAACGTAACCTGCCAGCGGTACAGCGATGGAGACCGAGTTTT 1255
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      CTGGGTGGCGGACGCTAGATACGCTGGGAAATACAAATAAAGGCCATAGCATGTCGTATT 1315
consensus_9565#1      ------------------------------------------------------------
consensus_9565#2      ------------------------------------------------------------
                                                                                  

consensus_9565#0      TGCCGTTATCATTGTCTAGCATA 1338
consensus_9565#1      -----------------------
consensus_9565#2      -----------------------