cluster # 9590

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Anopheles gambiae
cluster # 9590 cluster # 9590 Sequences # 18 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9590#0 length = 1569 sequences # 17

consensus_9590#1 length = 710 sequences # 1

consensusID : consensus_9590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1569
fasta sequence

                              [CCGCTCGCATGGCGTGCGGATCAAAACACTGTGCGTATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC-CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCGAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTCCAGCAGGTGATACTGCCGAAACAAACGTTAGCGAAGCG-AA-TGATGCAGATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGAAGAAGAGGAGGATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA-GCCCTCGAT-GGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCG-ATG-TACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAGCCACTGCCACAGCAGCGCATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGAGACATTTAACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAGCACATGTTATTCAGTATGATTCTTCGCTGATGATCCGTTCTTTGCTTCGGCATTACACATTTTTGAATAAAATGAAAGAAAAA]

[+] EMBL BM616890             [CCGCTCGCATGGCGTGCGGATCAAAACACTGTTCGTATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAGACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCGAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTCCTGCAGGTGATACTGCCGAAACAAACGTTAGCGAAGCG AA TGATGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09FVM             [    TCGCATGGCGTGCGGATCAAAACACTGTGCGTATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAGACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTCCTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAATTATCACTGCAGCGAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTCCTGCAGGTGATACTGCCGAAACAAACGTTAGCGAAGC  AC TGATGCAGATAACGAATCCTGCGAAGAAGAGTACGGTGATGATGATGGAGAAGAGGAGGATGGTGAGGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA GCCCTCGATGGGTCGTGTGATCAAGCAGGTGCGCACGTACATACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09AV2             [           GCGTGCGGATCAAAACACTGTGCGTATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTTTTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCTTTTTGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCAAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTTCAGCAGGTGATACTGCCGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM648714             [                   ccgAAAACACTGTGCGTATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCTAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGCGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAG      ATAGTGAAGCACACGAACACGAAACTATCACTGCAGCGAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTCCAGCAGGTGATACTGCCGAAACAAACGTTAGCGAAGCG AA TGATGCAGATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGAAGAAGAAGAag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM650778             [                               ccgGTATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACGGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX605462             [                                               CTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAGACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAATTATCACTGCAGCGAACGATGTTCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09NEK             [                                                   acTTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTTTTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCAAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTTCAGCAGGTGATACTGCCGAAACAAACGTTAGCGGAGGC AC TGATGCAGATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGAAGAAGAGGAGGATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA GCCCTCGAT GGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCG ATGCTACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09CC6             [                                                      ggaAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGC AAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTTTTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCAAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTTCAGCAGGTGATACTGCCGAAACAAACGTTAGCGGAG G AATTGATGCAGATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGAAGAAGAGGAGGATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS0977D             [                                                                                                    CTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTTTTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGCACGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCAAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTTCAGCAGGTGATACTGCCGAAACAAACGTTAGCGGA CGAAA TGATGCAGATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGAAGAAGAGGAGGATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM603905             [                                                                                                                                                                                                                                                 ccgCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAGACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGC CGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGCCAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGATCATAGTGAAGCACAAGAACACGAAATTATCACTGCAGCGAACGATGTTCAGGAAAGTTCAAAGGAATCAGCTCCTGCAGGTGATACTGCCGAAACAAACGTTAGCGAAGCG AA TGATGCAGATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGGAGAAGAGGAGGATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA GCCCTCGAT GGTCGTGTGATCAAGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS09NEL             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGTGAAACTGCCGAAACAAACGTTAGCGGAGCG AA TGATGCAGATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGAAGAAGAGGAGGATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTGTATCACGACGGATTACGAACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA GCCCTCGAT GGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCGAATG TACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAGCCACTGCCACAGCAGCGCATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGAGACATTTAACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAGCACATGTTATTCAGTATGATTCTTCGCTGATGATCCGTTCTTTGCTTCGGCATTACACATTTTTGAATAAA            ]
[-] EMBL CNS0977E             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCACGCCCTCGAT GGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCG ATG TACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAGCCACTGCCACAGCAGCGCATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGTA GATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGAGACATTTAACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAGCACATGTTATTCAGTATGATTCTTCGCTGATGATCCGTTCTTTGCTTCGGCATTACACATTTTTGAATAAAATGAAAGAAAAA]
[-] EMBL CNS09AV3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA GCCCTCGAT GGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCGAATG TACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAGCAAATGCAAAAAAAAAAAATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACAATGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGAGACATTTAACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAGCACATGTTATTCAGTATGATT TTCGCTGATGATCCGTTCTTTGCTTCGGCATTACA                          ]
[-] EMBL CNS09CC7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGATGGATCTCCACGACGAAACGCCAACCACCGTGGCCTTTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA GCCCTCGAT GGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCG ATG TACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAGCCACTGCCACAGCAGCGCATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGAGACATTTCACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAGCACATGTTATTCAGTATGATTCTTCGCTGATGATCCGTTCTTTGCTTCGGCATTACACATTTTTGAATAAAAT          ]
[+] EMBL BX612745             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGAAACAGATCGGCCTTCAGGTCGCA GCCCTCGAT GGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCG ATGCTACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAGCCACTGCCACAGCAGCGCATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGAGACATTTAACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAGCACATGTTATTCAGTATGATTCTTCGCTGATGATCCGTTCTTTGCTTCGGCATTACACATTTTTGAATAAAATGAAA      ]
[-] EMBL CNS09FVN             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AT GGTCGTGTGATAAAGAAGGTGCGCACGTACATACTGCG ATG TACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAACCACTGCCACAGCAGCGCATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTTGGTGATGAGTACATTGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGGTAAACCGACAGAGACATTTTACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAATTATCACCACATGTTACTCAGTATGATTCTTCGCTGATGATCCGTTCTTTG TTCGGCATTACACATTTTTGAATAAA            ]
[+] EMBL BX613092             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATATC GTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTACTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAATGAGCAACTACGAGT                                                                                                                                                                                                                                          ]




>consensus_9590#0
CCGCTCGCATGGCGTGCGGATCAAAACACTGTGCGTATCATCAAGTGCTTCAATTGCAGC
CGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTC
CAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGT
AACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCG
GACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCG
CTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTG
GGCAGGGACCATCTGCGCGATGAGCCGTTGCCGTCCATAACGGTGGCAGCAGCAACGAAG
CCAGACGCTTTCGGAGGAACCCAGCTTTTGAAGGGATTCTACGTTCCGACGAAAAAAAGC
CAGTCGGCAGATGAATCGCAAGAGGACGATGGCGAAAACATTGGCGATATTTCAGATGAT
CATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCGAACGATGTTCAGGAAAGTTCA
AAGGAATCAGCTCCAGCAGGTGATACTGCCGAAACAAACGTTAGCGAAGCGAATGATGCA
GATAACGAATCCTGCGAAGAAGAGTACGATGATGATGATGAAGAAGAGGAGGATGGTGAA
GATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAACACCGAGTAATATC
AAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGCCAACCACCGTGGCC
TGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCGGCCTTCAGGTCGCA
GCCCTCGATGGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGCGATGTACGCCTGCT
TTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGGCAACCGGACGCTGA
AGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCACATCAACAATCGGC
GACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGAAGGTGGCAAGCACG
CTGCCAACCCGTTGCTGTTTGCGGATCAGCCACTGCCACAGCAGCGCATATCGGTCAAGG
CCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTACTCCCCGTTCGTGA
TGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAATCTGAAACAGAGAA
TGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCCGATATAAGGAGTTG
CAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGAGACATTTAACTGGC
ATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAGCACATGTTATTCAG
TATGATTCTTCGCTGATGATCCGTTCTTTGCTTCGGCATTACACATTTTTGAATAAAATG
AAAGAAAAA

consensusID : consensus_9590#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 710
fasta sequence

                              [AAGAATCGCCCCGAGGTTATATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACGGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGCCGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAACGGGATTCTACGTTCCGACGAAAANAAAGCCACGTCGGCCAGATGAATCGCCAGAGGCACGATGGCGAAAACNTTGGCGATATTTCCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCAAACGACNGTTCAGGAAAGTTCACAAGGAATCAGCTTCAGCAGGTGATACTGGCCGNAAACAAACCGTTAGCGGAGCGAATGATGCAGATCAACGAATCCTGCGAAGCAAGAGTAACGATGATGCTGATGAAGAACACGGAG]

[+] EMBL AL695770             [AAGAATCGCCCCGAGGTTATATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACGCATCGAATTGCTATACGGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGCGCGATGAGCCGTTGCCGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAGGAACCCAGCTTTTGAACGGGATTCTACGTTCCGACGAAAANAAAGCCACGTCGGCCAGATGAATCGCCAGAGGCACGATGGCGAAAACNTTGGCGATATTTCCAGATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCAAACGACNGTTCAGGAAAGTTCACAAGGAATCAGCTTCAGCAGGTGATACTGGCCGNAAACAAACCGTTAGCGGAGCGAATGATGCAGATCAACGAATCCTGCGAAGCAAGAGTAACGATGATGCTGATGAAGAACACGGAG]




>consensus_9590#1
AAGAATCGCCCCGAGGTTATATCATCAAGTGCTTCAATTGCAGCCGAAACATGCCGAAAT
TCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTCCAGTTGCAGAACTACG
CATCGAATTGCTATACGGTTCCGGGTGTGATGGCTGAAATTCGTAACAACCGGCAAATGA
AACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCGGACCCAGATGTACTGG
CCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCGCTCTCACTGGTCGATC
TGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTGGGCAGGGACCATCTGC
GCGATGAGCCGTTGCCGTCCATAACGGTGGCAGCAGCAACGAAGCCAGACGCTTTCGGAG
GAACCCAGCTTTTGAACGGGATTCTACGTTCCGACGAAAANAAAGCCACGTCGGCCAGAT
GAATCGCCAGAGGCACGATGGCGAAAACNTTGGCGATATTTCCAGATGATCATAGTGAAG
CACAAGAACACGAAACTATCACTGCAGCAAACGACNGTTCAGGAAAGTTCACAAGGAATC
AGCTTCAGCAGGTGATACTGGCCGNAAACAAACCGTTAGCGGAGCGAATGATGCAGATCA
ACGAATCCTGCGAAGCAAGAGTAACGATGATGCTGATGAAGAACACGGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9590#0      CCGCTCGCATGGCGTGCGGATCAAAACACTGTGCGTATCATCAAGTGCTTCAATTGCAGC 60
consensus_9590#1      ---------------AAGAATCGCCCCGAGGT-TATATCATCAAGTGCTTCAATTGCAGC 44
                                       * ***    *   **   *************************

consensus_9590#0      CGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTC 120
consensus_9590#1      CGAAACATGCCGAAATTCGATCATTTAATTGTAGATACAGCTGCGTTCGTGAAGAATGTC 104
                      ************************************************************

consensus_9590#0      CAGTTGCAGAACTACGCATCGAATTGCTATACCGTTCCGGGTGTGATGGCTGAAATTCGT 180
consensus_9590#1      CAGTTGCAGAACTACGCATCGAATTGCTATACGGTTCCGGGTGTGATGGCTGAAATTCGT 164
                      ******************************** ***************************

consensus_9590#0      AACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCG 240
consensus_9590#1      AACAACCGGCAAATGAAACGGCTCGCCGTGCTTCCGTACAATCTGCAAGTGAAGGATCCG 224
                      ************************************************************

consensus_9590#0      GACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCG 300
consensus_9590#1      GACCCAGATGTACTGGCCAAGGTGGTGGCGATTGCAAAGAAAACGGGTGACTATGCCTCG 284
                      ************************************************************

consensus_9590#0      CTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTG 360
consensus_9590#1      CTCTCACTGGTCGATCTGCAGGTTATTGCGCTCACGTATGAACTCGAAACAATCCACGTG 344
                      ************************************************************

consensus_9590#0      GGCAGGGACCATCTGCGCGATGAGCCGTTGCCGTCCATAACGGTGGCAGCAGCAACGAAG 420
consensus_9590#1      GGCAGGGACCATCTGCGCGATGAGCCGTTGCCGTCCATAACGGTGGCAGCAGCAACGAAG 404
                      ************************************************************

consensus_9590#0      CCAGACGCTTTCGGAGGAACCCAGCTTTTGAA-GGGATTCTACGTTCCGACGAAAAAAA- 478
consensus_9590#1      CCAGACGCTTTCGGAGGAACCCAGCTTTTGAACGGGATTCTACGTTCCGACGAAAANAAA 464
                      ******************************** *********************** ** 

consensus_9590#0      GCCA-GTCGGC-AGATGAATCGCAAGAGG-ACGATGGCGAAAACATTGGCGATATTTC-A 534
consensus_9590#1      GCCACGTCGGCCAGATGAATCGCCAGAGGCACGATGGCGAAAACNTTGGCGATATTTCCA 524
                      **** ****** *********** ***** ************** ************* *

consensus_9590#0      GATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCGAACGA-TGTTCAGGA 593
consensus_9590#1      GATGATCATAGTGAAGCACAAGAACACGAAACTATCACTGCAGCAAACGACNGTTCAGGA 584
                      ******************************************** *****  ********

consensus_9590#0      AAGTTCA-AAGGAATCAGCTCCAGCAGGTGATACTGCC--GAAACAAAC-GTTAGCGAAG 649
consensus_9590#1      AAGTTCACAAGGAATCAGCTTCAGCAGGTGATACTGGCCGNAAACAAACCGTTAGCGGAG 644
                      ******* ************ *************** *   ******** ******* **

consensus_9590#0      CGAATGATGCAGAT-AACGAATCCTGCGAAG-AAGAGTA-CGATGATGATGATGAAGAAG 706
consensus_9590#1      CGAATGATGCAGATCAACGAATCCTGCGAAGCAAGAGTAACGATGATGCTGATGAAGAAC 704
                      ************** **************** ******* ******** ********** 

consensus_9590#0      AGGAGGATGGTGAAGATGATGAGGATGGCAACGATGGTGACGATGATGCTGGTTGGATAA 766
consensus_9590#1      ACGGAG------------------------------------------------------ 710
                      * *  *                                                      

consensus_9590#0      CACCGAGTAATATCAAGCAGGTAAAGCGCGACATGGGGATGGATCTCCACGACGAAACGC 826
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      CAACCACCGTGGCCTGTATCACGACGGATTACGCACTGCAGAACGTGCTGAAACAGATCG 886
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      GCCTTCAGGTCGCAGCCCTCGATGGTCGTGTGATCAAGCAGGTGCGCACGTACATACTGC 946
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      GATGTACGCCTGCTTTAAGACGACACCGGACGCAACGAAGGTGTTCTGCCCGAAGTGCGG 1006
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      CAACCGGACGCTGAAGAAAGTTTCCGTCAGTCTGGACGGAGAAGGCAAACAGATTATCCA 1066
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      CATCAACAATCGGCGACCGCTGACGGCCAAGTACAAAAACCGACCGGTAGCCAAGTTCGA 1126
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      AGGTGGCAAGCACGCTGCCAACCCGTTGCTGTTTGCGGATCAGCCACTGCCACAGCAGCG 1186
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      CATATCGGTCAAGGCCCGTTCGAAGACCAACGCGCTCGGTGATGACTACATTGCCGGCTA 1246
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      CTCCCCGTTCGTGATGAGAGACGTCGATTCGCGGTCAGCTGTACTGCGTGGTTCTACTAA 1306
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      TCTGAAACAGAGAATGAGCAACTACGAGTACGATAACAAGCGCCGGGGATATAAAAAGCC 1366
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      GATATAAGGAGTTGCAAACAAGTCTACTTTTCTGTTATGGCTGATAGTTAAACCGACAGA 1426
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      GACATTTAACTGGCATAAGATAAGGTTTGATTGCATTGTAGGGATATATGTAACTATCAG 1486
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      CACATGTTATTCAGTATGATTCTTCGCTGATGATCCGTTCTTTGCTTCGGCATTACACAT 1546
consensus_9590#1      ------------------------------------------------------------
                                                                                  

consensus_9590#0      TTTTGAATAAAATGAAAGAAAAA 1569
consensus_9590#1      -----------------------