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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9599#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1002 fasta sequence
[CTGTTGGCCTACTGGAGTCGC-ACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG-ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG-CTGCCGGAGGATGCCCGCGAGCG-GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC-GGGAGGCG-TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA-ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTACAAATATAAAACGAGACAAAAAAAAAAAAAAAAAACA]
[-] EMBL CNS09MPP [CTGTTGGCCTACTGGAGTCGCAACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGTGTCTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAGCGGTCGGCCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGta ]
[+] EMBL CNS094GR [ CTGGAGTCGC TCTGAACCGTCG AGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACGCATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACC ]
[+] EMBL CNS099KF [ ACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCGCGCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATAAAAAA ]
[+] EMBL CNS09MKO [ cAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAGGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCGTTATCAATCGATGAAGAAACGGTCGGTCGGTGGGCACATTGTTCA ]
[-] EMBL CNS09L3R [ CGTCGAAGGGTTTTTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAA ]
[+] EMBL CNS08CM3 [ cgAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTTTTGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATTTGGTCGGGTTGGCGCTGTGCAGCC GGGAGG G TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACATAAGGTGATCCCGATGAACACGCTCAATGTGTATTCGGCCACCAAGTACGGTGTGA CGCGCTGACGGAGACAGATTCGGCACGAGCTGCGAATTGTTGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTTGTGTTCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTTTGTACGTTCTCGGCACCCCACCGCGTGTTCAGGTGCACGAGCTAATTATCAAACCGGTCGGTGAATCGCTCGGATAAGTTACCACGAACCGAAATTCGATGAAGCTATCGATCCCAGAAATAAAGAAAGTTTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTACAAATATTAAACGAGACAAAAAAAAAAAAAAAAAACA]
[+] EMBL BX619232 [ CGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGAAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATAGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCCTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCACGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGANTCTGNNNNGGTTGGCGCTGTGCAGCCNGGGAGGCG TATCAATCGATGANNANACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGNGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATTCGGCCACCCAGTACGGTGTGACCGCGCTGACGGAGACN ANGCGGCACGAGCTGCGAATGGCCGGGA ]
[-] EMBL CNS094GS [ GTACTTTTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAAAGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATATTTAAGTACAAATATAAAAaa ]
[+] EMBL BX608018 [ GGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGTCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAAGTGATCCCGATGAACACGCTCAATGTGTATC ]
[+] EMBL BX611024 [ AGCTCCGGCATTGGGGTAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACG ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGAAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCA ]
[-] EMBL CNS09MKP [ CAGCC GGCAGGCG TATCAATCAATAAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCAAACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTT GAATAAATAGTT ]
[-] EMBL CNS08CM4 [ GCATACTGGGAAACAAGGTGATCCCGATGGAAACGCTCAATGTGTATCCGGCCCCCAAGTACGGTGTGACCGCGCTGACGGAGAAA ATGCGGCACGAGCTGCAAATGGCGGGGACGAAAATAAAAGTAACGAGCATTAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAAAAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCCCCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTAAAAATATAAA ]
[-] EMBL CNS099KG [ GTGTATCCGGCCACCAAGTACGGTTTTACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTTACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTA ]
consensusID : consensus_9599#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 808 fasta sequence
[AAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCGCGCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCCGGGAGGCGTTATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTG]
[+] EMBL CNS09L3Q [AAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCGCGCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCCGGGAGGCGTTATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTG]
consensusID : consensus_9599#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 734 fasta sequence
[TCCTTCCTTCGTTTCTTATCATAAAGCCCGTCACACAGCCATGGAACGCTGGCGTGGAAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGTGCAGTGACGGTGAAAGCCCTCGCCAACGCCGGTATGATCACGTTCGGCCTGGCTCGCCGTGTCGAACGGGTCGACGAGCTGAAGAAGGACCTTCCCGCCGAGGCAGCGGACCGGCTGCACAGTGTCCGGTGTGACGTTACGACATTTTGGCCGCCTTCCAGCTGGTGGAGGAAAAGTGTGGCGGTGTCGATGTGCTGATCAACAACGCCGGTCAGTTGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTTATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCAGTTGATGAAGCGTCGCTTGGTCGATGGGCATATCGTGCACATTAGCAGCATCCTTGGCCATACGGTTGCGACGACGGGCAAGCTTAACGTCTATCCGGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGCGGGAACGAAAATCAAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCCCAGTACAGTCTTTGCCGANGAGCCCTGTCTCGAGCCGGANGACATTGCGGATGCTGTGCTATACGTGCTCGGGACACCGCCCCGGGTACAGATCCACGA]
[+] EMBL BX622312 [TCCTTCCTTCGTTTCTTATCATAAAGCCCGTCACACAGCCATGGAACGCTGGCGTGGAAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGTGCAGTGACGGTGAAAGCCCTCGCCAACGCCGGTATGATCACGTTCGGCCTGGCTCGCCGTGTCGAACGGGTCGACGAGCTGAAGAAGGACCTTCCCGCCGAGGCAGCGGACCGGCTGCACAGTGTCCGGTGTGACGTTACGACATTTTGGCCGCCTTCCAGCTGGTGGAGGAAAAGTGTGGCGGTGTCGATGTGCTGATCAACAACGCCGGTCAGTTGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTTATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCAGTTGATGAAGCGTCGCTTGGTCGATGGGCATATCGTGCACATTAGCAGCATCCTTGGCCATACGGTTGCGACGACGGGCAAGCTTAACGTCTATCCGGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGCGGGAACGAAAATCAAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCCCAGTACAGTCTTTGCCGANGAGCCCTGTCTCGAGCCGGANGACATTGCGGATGCTGTGCTATACGTGCTCGGGACACCGCCCCGGGTACAGATCCACGA]
[+] EMBL BX622452 [ GTGACCGGTGCTAGCTCCGGCATTGGTGCAGTGACGGTGAAAGCCCTCGCCAACGCCGGTATGATCACGTTCGGCCTGGCTCGCCGTGTCGAACGGGTCGACGAGCTGAAGAAGGACCTTCCCGCCGAGGCAGCGGACCGGCTGCACAGTGTCCGGTGTGACGTTACGACATTTTGGCCGCCTTCCAGCTGGTGGAGGAAAAGTGTGGCGGTGTCGATGTGCTGATCAACAACGCCGGTCAGTTGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACNCAGGTTATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCAGTTGATGAAGCGTCGCTTGGTCNATGGGCATATCGTGCACATTAGCAGCATCCTTGGCCATACNGTTGCGACGACGGGCAAGCTTAACGTCTATCCGGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGCGGGAACGAAAATCNAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCCCANTACAGTCTTTGCCGAGGAGCCCTGTCTCGAGCCNGAGGACATTGCGGATGCTGTGCTATACGTGCTCNGG ]
consensusID : consensus_9599#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 602 fasta sequence
[CAGAATACCCCGGTTATTTTTNTGTTATTGTACCCATTGGTTNTGNCANTAAGTGTCGANATAGAACATTCCAAACGATAGCACGATGGAACGCTGGCGTAGGCAAGGTGGCCATATGTGACCGGTGACTAGCATCCGGCATNGGGCGCAGCTAACGGTGAAAGCTACTCGCACANTGNCGGTATGATCACGTTCGGCTTGGGCCCGNCGATGTCGAACGGGNTGGAAGCACTGAAGGACGAGCTGCACGNGAGGATGNCCCGCTGAGCTGGCTGCTACGCACTGTCNCTGTGACGTNNACGAAGTGAGGAGGACATTTANAGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTNGTACGATGTGCTNGATCAACCAATNGCCGGCGTGGCGCGATCGAGATGTCGGCGTGCTGGACTGCGAAAAATACGCAGGAATTGCGCGACTGTGAATCGANCACGAATCTGGATACGAGNGTTGGACGCTAGTGCANCCCGGTGCACAGCGTATCAAATCGATGAAGAAACGGTCGGATCGATGGGCACACTCAGTGCACATTCNCCCGGCCACTACCTGGGACCACAAGGGTGAATCCCGG]
[+] EMBL AL932125 [CAGAATACCCCGGTTATTTTTNTGTTATTGTACCCATTGGTTNTGNCANTAAGTGTCGANATAGAACATTCCAAACGATAGCACGATGGAACGCTGGCGTAGGCAAGGTGGCCATATGTGACCGGTGACTAGCATCCGGCATNGGGCGCAGCTAACGGTGAAAGCTACTCGCACANTGNCGGTATGATCACGTTCGGCTTGGGCCCGNCGATGTCGAACGGGNTGGAAGCACTGAAGGACGAGCTGCACGNGAGGATGNCCCGCTGAGCTGGCTGCTACGCACTGTCNCTGTGACGTNNACGAAGTGAGGAGGACATTTANAGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTNGTACGATGTGCTNGATCAACCAATNGCCGGCGTGGCGCGATCGAGATGTCGGCGTGCTGGACTGCGAAAAATACGCAGGAATTGCGCGACTGTGAATCGANCACGAATCTGGATACGAGNGTTGGACGCTAGTGCANCCCGGTGCACAGCGTATCAAATCGATGAAGAAACGGTCGGATCGATGGGCACACTCAGTGCACATTCNCCCGGCCACTACCTGGGACCACAAGGGTGAATCCCGG]
consensusID : consensus_9599#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence
[AGCAGAATCAGCCCNAGGATTAATCGGAACACACGCACGCGTTACAGTTGGCTCCTTCCTTCGTNCTTATACAAAAAGCTCGTCACACAGCCATGGAACGCTGGGCGTGGAAAGTGTGGCCATATGTGACCGGTGCTAGGCTCCGGCATATGGTGCAGTGACGGTGAAAGCGCTACGGCCAACGCCGGTATGATCACGTTCGGTCTGGCTACGCCGTGTCGAACGGGTCGACGAGCTGAAGGAAGGACCTTNTCTGCCGAGGACAGCGGACCTGGCTGCACAGTGTCCTGGTGTTGTACGTATACGAAGGAGGAGGACATTTTGGCCGCCTTACCAGCTGGTGGAGGAAAAGTGTGGCCGGTGTCGATGTGCTGATCAACAATGCCNGGTCAGTCAGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTCATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCA]
[+] EMBL AL693981 [AGCAGAATCAGCCCNAGGATTAATCGGAACACACGCACGCGTTACAGTTGGCTCCTTCCTTCGTNCTTATACAAAAAGCTCGTCACACAGCCATGGAACGCTGGGCGTGGAAAGTGTGGCCATATGTGACCGGTGCTAGGCTCCGGCATATGGTGCAGTGACGGTGAAAGCGCTACGGCCAACGCCGGTATGATCACGTTCGGTCTGGCTACGCCGTGTCGAACGGGTCGACGAGCTGAAGGAAGGACCTTNTCTGCCGAGGACAGCGGACCTGGCTGCACAGTGTCCTGGTGTTGTACGTATACGAAGGAGGAGGACATTTTGGCCGCCTTACCAGCTGGTGGAGGAAAAGTGTGGCCGGTGTCGATGTGCTGATCAACAATGCCNGGTCAGTCAGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTCATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9599#0 CTGTTGGCCTACTGGAGTCGCACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGT 60
consensus_9599#1 ------------------------------------------------------------
consensus_9599#3 ------------------------------------------------------------
consensus_9599#2 ------------------------------------------------------------
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 TATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACGATAGCACG 120
consensus_9599#1 ------------------------------------------------------------
consensus_9599#3 ------------------------------------------------------------
consensus_9599#2 ------------------------------------------------------------
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 ATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCA 180
consensus_9599#1 ------------------------------------------------------------
consensus_9599#3 ------------------------------------------------------------
consensus_9599#2 ------------------------------------------------------------
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 GCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTC 240
consensus_9599#1 ----------AAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTC 50
consensus_9599#3 ------------------------------------------------------------
consensus_9599#2 ------------------------------------------------------------
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 GAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCG-GCTGCACGC 299
consensus_9599#1 GAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCGCGCTGCACGC 110
consensus_9599#3 ---------------------------------CAGAATACCC-CGGTTATTTTTNTGTT 26
consensus_9599#2 ------------------------------------------------------------
consensus_9599#4 ----------------------------AGCAGAATCAGCCCNAGGATTAATCGGAACAC 32
consensus_9599#0 ACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACA 359
consensus_9599#1 ACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACA 170
consensus_9599#3 ATTGTACCCATTGGTTNTGNCANTAAGTGTCGANATAGA-ACATTCCAAACGATAGCACG 85
consensus_9599#2 --------------------TCCTTCCTTCGTTTCTTATCATAAAGCCCGTCACACAGCC 40
consensus_9599#4 ACGCACGCGTTACAGTTGGCTCCTTCCTTCGTNCTTATACAAAAAGCTCGTCACACAGCC 92
* * *
consensus_9599#0 ACGGTGCGGCGG-TGTCGATGTGCTGATCAACAATG-CCGGCGTGGCGCGATCGAGTGTC 417
consensus_9599#1 ACGGTGCGGCGG-TGTCGATGTGCTGATCAACAATG-CCGGCGTGGCGCGATCGAGTGTC 228
consensus_9599#3 ATGGAACGCTGG-CGTAGGCAAGGTGGCCATATGTGACCGGTGACTAGCATCCGGCATNG 144
consensus_9599#2 ATGGAACGCTGG-CGTGGAAAG-GTGGCCAT-TGTGACCGGTGCTAG-C-TCCGGCAT-T 94
consensus_9599#4 ATGGAACGCTGGGCGTGGAAAGTGTGGCCATATGTGACCGGTGCTAGGC-TCCGGCATAT 151
* ** ** ** ** * ** ** ** **** * * **
consensus_9599#0 GGCGT-GCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGT 476
consensus_9599#1 GGCGT-GCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGT 287
consensus_9599#3 GGCGCAGCTAACGGTGAAAGCTACTCGCACANTGN-CGGTATGATCACGTTCGGCTTGGG 203
consensus_9599#2 GGTGC-AGTGACGGTGAAAGCCCTC--GCCAACGC-CGGTATGATCACGTTCGGCCTGGC 150
consensus_9599#4 GGTGC-AGTGACGGTGAAAGCGCTACGGCCAACGC-CGGTATGATCACGTTCGGTCTGGC 209
** * * * **** * ** ***** ***
consensus_9599#0 CGGGTTGGCGCTGTGCAGCCGGGAGGCGT-ATCAATCGA--TGAA-GAAACGGTCGGTCG 532
consensus_9599#1 CGGGTTGGCGCTGTGCAGCCGGGAGGCGTTATCAATCGA--TGAA-GAAACGGTCGGTCG 344
consensus_9599#3 CCCGNCGATGTCGAACGGGNTGGAAGCACTGAAGGACGAGCTGCACGNGAGGATGNCCCG 263
consensus_9599#2 T-CGCCG-TGTCGAACGGGTCG-ACGAGCTGAAG-AAGGACCTTCCC-GCCGA-GG-CAG 203
consensus_9599#4 TACGCCG-TGTCGAACGGGTCG-ACGAGCTGAAGGAAGGACCTTNTCTGCCGA-GGACAG 266
* * * * * * * * * * * *
consensus_9599#0 ATGGGCACATTG-TGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACG 591
consensus_9599#1 ATGGGCACATTG-TGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACG 403
consensus_9599#3 CTGAGCTGGCTGCTACGCACTGTCNCTGTGACGTNN-ACGAAGTGA----GGAGGACATT 318
consensus_9599#2 CGGACC-GGCTG---CACAGTGTCC-GGTGTG--ACGT-TACGA--------------CA 241
consensus_9599#4 CGGACCTGGCTG---CACAGTGTCCTGGTGTTGTACGTATACGAAG----GAGGAGGACA 319
* * ** * ** * * * * *
consensus_9599#0 CTCAATGTGTATC-CGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCA 650
consensus_9599#1 CTCAATGTGTATC-CGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCA 462
consensus_9599#3 TANAGGCCGCCTT-CCGGGAGGTCGAACAACGGTGCGGCGGTNGT----ACGATGTG-CT 372
consensus_9599#2 TTTTGGCCGCCTT-CCAGCTGGTGGAGGAAAAGTGTGGC-GGTGT-----CGATGTG--C 292
consensus_9599#4 TTTTGGCCGCCTTACCAGCTGGTGGAGGAAAAGTGTGGCCGGTGT-----CGATGTG--C 372
* * * * ** * *** *
consensus_9599#0 CGAGCTGCGAATGGCGGGGACGAAA--ATCAAAGTCACGAGCATCAGTCCCGGTCTGGTA 708
consensus_9599#1 CGAGCTGCGAATGGCGGGGACGAAA--ATCAAAGTCACGAGCATCAGTCCCGGTCTGGTA 520
consensus_9599#3 NGATCAACCAATNGCCGGCGTGGCGCGATCGAGATGTCG-GCGT--GCTGGACTGCGAAA 429
consensus_9599#2 TGATCAAC-AACGCCGG-TCAGTT-GAAGCGCGCGGTCA-GTGT--GCTGGA-TGCGGGC 345
consensus_9599#4 TGATCAAC-AATGCCNGGTCAGTCAGAAGCGCGCGGTCA-GTGT--GCTGGA-TGCGGGC 427
** * * ** * * * * * * * * * * *
consensus_9599#0 AGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAA 768
consensus_9599#1 AGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAA 580
consensus_9599#3 AATACGCAGGAATTGCGCGACTGTGAATCGANCACGAATCTGG--ATACGAGNGTTGGA- 486
consensus_9599#2 AATACGCAGGTTATACGGGA-TGTGA-TCGAT-ACGAACGTGGTCGGGTTGGCGCTGTGC 402
consensus_9599#4 AATACGCAGGTCATACGGGA-TGTGA-TCGAT-ACGAACGTGGTCGGGTTGGCGCTGTGC 484
* *** ** * * * *** * * * ** * *
consensus_9599#0 GACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCG-TGTACAGGTGCACGA 827
consensus_9599#1 GACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCG-TGTACAGGTGCACGA 639
consensus_9599#3 -----CGCTAGTG-CANCCCG---GTGCACAGCGTATCAAATCGATGAAGAAACGGTCGG 537
consensus_9599#2 AGC----CGGGAAGCGTTCCA---GTTGATGAAGCGTCGCTTGGTCGATGGGCATATCGT 455
consensus_9599#4 AGC----CGGGAAGCGTTCCA--------------------------------------- 501
* * *
consensus_9599#0 GCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGAT 887
consensus_9599#1 GCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGAT 699
consensus_9599#3 ATCGATGGGCACACTCAGTGCACATTCNCCCGGCCA--CTACCTGGGACCACAA--GGGT 593
consensus_9599#2 GCACATTAGCAGCATCCTTGGCCATACGGTTGCGACGACGGGCAAGCTTAACGTCTATCC 515
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 GAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTT 947
consensus_9599#1 GAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTT 759
consensus_9599#3 GAATC--CCGG------------------------------------------------- 602
consensus_9599#2 GGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGC 575
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 GGAATAAATAGTTCGGTACAAATATAAAACGAGACAAAAAAAAAAAAAAAAAACA----- 1002
consensus_9599#1 GGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTG----------- 808
consensus_9599#3 ------------------------------------------------------------
consensus_9599#2 GGGAACGAAAATCAAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCC 635
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 ------------------------------------------------------------
consensus_9599#1 ------------------------------------------------------------
consensus_9599#3 ------------------------------------------------------------
consensus_9599#2 CAGTACAGTCTTTGCCGANGAGCCCTGTCTCGAGCCGGANGACATTGCGGATGCTGTGCT 695
consensus_9599#4 ------------------------------------------------------------
consensus_9599#0 ---------------------------------------
consensus_9599#1 ---------------------------------------
consensus_9599#3 ---------------------------------------
consensus_9599#2 ATACGTGCTCGGGACACCGCCCCGGGTACAGATCCACGA 734
consensus_9599#4 ---------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||