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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9610#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1470 fasta sequence
[CCGCCCACGCGTCCGCGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGGGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGAGCCAGGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAAAGGCGGAATTGAAATTTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATAACAGCTCCCGATTGCTATCGTTTCGATATAATGATTTTCTTCAACAACCAAGACCACGATGGCCAAATGGTACTTCGGCTGGAAGCAGAACCTACACGGTTGGTTTGCCACGGCGATGTAGAGTTTATCAAAAACTCACAAATAGACGACGCACTGCGCAG-CTTG-TTGAACATTCTAGTGATCGTGATATGTCTGGTTTCGTTTGCTCTCTGTGCACGTGCCATTTTTCGTGCCCAGATTTTGCGGCTGACTACTTGTGATTTTTTCAAGCAAGCCTATGGCAAGGATCTTAGCTGCGAAGGCAAATGGGAGTTCGTCAACATGTGGTACATCATGATCGTATTCAACGACATACTGC-TTATTATTGGATCGGCACTTAAGGAGCAGATTGAAAGGAAGCACTTTATTGCAGACGACTGGAACGTTTGCTCCCTGCTTTTGGGTGTGGGCAACTCGTTAGTTTGGTTCGGTGTTTTGCGTTACCTTGGATTCTTCAAAACGTACAATGTCGTCATACTAACACTGAAGAAGGCTGCACCTAAAATTAGCCGATTTTTGCTCTGTGCTCTTTTAATCTATGCTGGCTTCACCTTCTGTGGATGGCTGGTGCTTGGACCGTACCACATTAAGTTTCGTTCGCTTTCTACCACCTCCGAGTGTCTGTTCGCTCTTATCAACGGTGACGATATGTTTGCAACCTTCTCGATCATGTCGGAAAAATCATTGATGCTGTGGTGGTTTTGCCGAATCTATCTGTACTCCTTTACCAGCCTCTATATATATGTGGTATTATCTTTGTTCATATCCGTCATTATGGACGCGTACGATACGATCAAGAAGTATTACAAGGATGGTTTCCCGCAGTCCGATCTTCGACTGTTTGTTGGACCGATCAGTCCTAATGACTTCTCTAGCGGTGTTTTCCGGGAGCACGAAGAATTCGATCTGGAGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACTAACGGCCCAACT-GGCTACACATCATTATTACCAAAGGCTTCTTCTTCAAGCTATGTCAACAATTAGCCAATTTCAAATCTCTTCAGTATCGTTGTTCATTAATTTGTTATGAAGTATGCAATAAATTTTAAAAAGCCATAAAAAATACACCA]
[+] EMBL BM652723 [CCGCCCACGCGTCCGCGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGGGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGAGCCAGGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAAAGGCGGAATTGAAATTTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATAACAGCTCCCGATTGCTATCGTTTCGATATAATGATTTTCTTCAACAACCAAGACCACGATGGCCAAATGGTACTTCGGCTGGAAGCAGAACCTACACGGTTGGTTTGCCACGGCGATGTAGAGTTTATCAAAAACTCACAAATAGACGACGCACTGCGCAG CTTG TTGAACATTCTAGTGATCGTGATATGTCTGGTTTCGTTTGCTCTCTGTGCACGTGCCATTTTTCGTGC ]
[+] EMBL CNS08DC7 [ atGGCGATGTAGAGTTTATCAAAAACTCACAAATAGACGACGCACTGCGCA TTG TTGAACATTCTAGTGATCGTGATATGTCTGGTTTCGTTTGCTCTCTGTGCACGTGCCATTTTTCGTGCCCAGATTTTGCGGCTGACTACTTGTGATTTTTTCAAGCAAGCCTATGGCAAGGATCTTAGCTGCGAAGGCAAATGGGAGTTCGTCAACATGTGGTTCATCATGATCGTATTCAACGACATACTGC TTATTATTGGATCGGCACTTAAGGAGCAGATTGAAAGGAAGCACTTTATTGCAGACGACTGGAACGTTTGCTCCCTGCTTTTGGGTGTGGGCAACTCGTTAGTTTGGTTCGGTGTTTTGCGTTACCTTGGATTCTTCAAAACGTACAATGTCGTCATACTAACACTGAAGAAGGCTGCACCTAAAATTAGCCGATTTTTGCTCTGTGCTCTTTTAATCTATGCTGGCTTCACCTTCTGTGGATGGCTGGTGCTTGGACCGTACCACATTAAGTTTCGTTCGCTTTCTACCACCTCCGAGTGTCTGTTCGCTCTTATCAACGGTGACGATATGTTTGCAACCTTCTCGATCATGTCGGAAAAATCATTGATGCTGTGGTGGTTTTGCCGAATCTATCTGTACTCCTTTACCAGCCTCTATATATATGTGGTATTATCTTTGTTCATATCCGTCATTATGGACGCGTACGATACGATCAAGAAGTATTACAAGGATGGTTTCCCGCAGTCCGATCTTCGACTGTTTGTTGGACCGATCAGTCCTAATGACTTCTCTAGCGGTGTTTTCCGGGAGCACGAAGAATTCGATCTGGAGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACTAACGGCCCAACT GGCTACACATCATTATTACCAAAGGCTTCTTCTTCAAGCTATGTCAACAATTAGCCAATTTCAAATCTCTTCAGTATCGTTGTTCATTAATTTGTTATGAAGTATGCAATAAATTTTAAAAAGCCATAAAAAATACACCA]
[-] EMBL CNS08DC8 [ AGAGTTTATCAAAAACTCACAAATAGACGACGCACTGCGCAG CTTG TTGAACATTCTAGTGATCGTGATATGTCTGGTTTCGTTTGCTCTCTGTGCACGTGCCATTTTTCGTGCCCAGATTTTGCGGCTGACTACTTGTGATTTTTTCAAGCAAGCCTATGGCAAGGATCTTAGCTGCGAAGGCAAATGGGAGTTCGTCAACATGTGGTACATCATGATCGTATTCAACGACATACTGC TTATTATTGGATCGGCACTTAAGGAGCAGATTGAAAGGAAGCACTTTATTGCAGACGACTGGAACGTTTGCTCCCTGCTTTTGGGTGTGGGCAACTCGTTAGTTTGGTTCGGTGTTTTGCGTTACCTTGGATTCTTCAAAACGTACAATGTCGTCATACTAACACTGAAGAAGGCTGCACCTAAAATTAGCCGATTTTTGCTCTGTGCTCTTTTAATCTATGCTGGCTTCACCTTCTGTGGATGGCTGGTGCTTGGACCGTACCACATTAAGTTTCGTTCGCTTTCTACCACCTCCGAGTGTCTGTTCGCTCTTATCAACGGTGACGATATGTTTGCAACCTTCTCGATCATGTCGGAAAAATCATTGATGCTGTGGTGGTTTTGCCGAATCTATCTGTACTCCTTTACCAGCCTCTATATATATGTGGTATTATCTTTGTTCATATCCGTCATTATGGACGCGTACGATACGATCAAGAAGTATTACAAGGATGGTTTCCCGCAGTCCGATCTTCGACTGTTTGTTGGACCGATCAGTCCTAATGACTTCTCTAGCGGTGTTTTCCAGGAGCACGAAGAATTCGATCTGGAGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACTAACGGCCCAACT GGCTACACATCATTATTACCAAAGGCTTCTTCTTCAAGCTATGTCAACAATTAGCCAATTTCAAATCTCTTCAGTATCGTTGTTCATTAATTTGTTATGAAGTATGCAATAAATTTTAAAAAGCCATA ]
[+] EMBL CNS08DED [ TTTATCAAAAACTCACAAATAGACGACGCACTGCGCAGTCTAGCTTGAACATTCTAGTGATCGTGATATGTCTGGTTTCGTTTGCTCTCTGTGCACGTGCCATTTTTCGTGCCCAGATTTTGCGGCTGACTACTTGTGATTTTTTCAAGCAAGCCTATGGCAAGGATCTTAGCTGCGAAGGCAAATGGGAGTTCGTCAACATGTGGTACATCATGATCGTATTCAACGACATACTGC TTATTATTGGATCGGCACTTAAGGAGCAGATTGAAAGGAAGCACTTTATTGCAGACGACTGGAACGTTTGCTCCCTGCTTTTGGGTGTGGGCAACTCGTTAGTTTGGTTCGGTGTTTTGCGTTACCTTGGATTCTTCAAAACGTACAATGTCGTCATACTAACACTGAAGAAGGCTGCACCTAAAATTAGCCGATTTTTGCTCTGTGCTCTTTTAATCTATGCTGGCTTCACCTTCTGTGGATGGCTGGTGCTTGGACCGTACCACATTAAGTTTCGTTCGCTTTCTACCACCTCCGAGTGTCTGTTCGCTCTTATCAACGGTGACGATATGTTTGCAACCTTCTCGATCATGTCGGAAAAATCATTGATGCTGTGGTGGTTTTGCCGAATCTATCTGTACTCCTTTACCAGCCTCTATATATATGTGGTATTATCTTTGTTCATATCCGTCATTATGGACGCGTACGATACGATCAAGAAGTATTACAAGGATGGTTTCCCGCAGTCCGATCTTCGACTGTTTGTTGGACCGATCAGTCCTAATGACTTCTCTAGCGGTGTTTTCCGGGAGCACGAAGAATTCGATCTGGAGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACTAACGGCCCAACT GGCTACACATCATTATTACCAAAGGCTTCTTCTTCAAGCTATGTCAACAATT ]
[-] EMBL CNS08DEE [ TAGTGATCGTGATATGTCTGGTTTCGTTTGCTCTCTGTGCACGTGCCATTTTTCGTGCCCAGATTTTGCGGCTGACTACTTGTGATTTTTTCAAGCAAGCCTATGGCAAGGATCTTAGCTGCGAAGGCAAATGGGAGTTCGTCAACATGTGGTACATCATGATCGTATTCAACGACATACTGC TTATTATTGGATCGGCACTTAAGGAGCAGATTGAAAGGAAGCACTTTATTGCAGACGACTGGAACGTTTGCTCCCTGCTTTTGGGTGTGGGCAACTCGTTAGTTTGGTTCGGTGTTTTGCGTTACCTTGGATTCTTCAAAACGTACAATGTCGTCATACTAACACTGAAGAAGGCTGCACCTAAAATTAGCCGATTTTTGCTCTGTGCTCTTTTAATCTATGCTGGCTTCACCTTCTGTGGATGGCTGGTGCTTGGACCGTACCACATTAAGTTTCGTTCGCTTTCTACCACCTCCGAGTGTCTGTTCGCTCTTATCAACGGTGACGATATGTTTGCAACCTTCTCGATCATGTCGGAAAAATCATTGATGCTGTGGTGGTTTTGCCGAATCTATCTGTACTCCTTTACCAGCCTCTATATATATGTGGTATTATCTTTGTTCATATCCGTCATTATGGACGCGTACGATACGATCAAGAAGTATTACAAGGATGGTTTCCCGCAGTCCGATCTTCGACTGTTTGTTGGACCGATCAGTCCTAATGACTTCTCTAGCGGTGTTTTCCGGGAGCACGAAGAATTCGATCTGGAGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACTAACGGCCCAACT GGCTACACATCATTATTACCAAAGGCTTCTTCTTCAAGCTATGTCAACAATTAGCCAATTTCAAATCTCTTCAGTATCGTTGTTCATTAATTTGTTATGAAGTATGCAATA ]
[+] EMBL BX612346 [ CTATGGCAAGGATCTTAGCTGCGAAGGCAAAGGGGAGTTCGTCAACATGTGGTACATCATGATCGTATTCAACGACATACTGCTTTATTATTGGATCGGCA ]
[+] EMBL BM593988 [ ccgAACTCGTTAGTTTGGTTCGGTGTTTTGCGTTACCTTGGATTCTTCAAAACGTACAATGTCGTCATACTAACACTGAAGAAGGCTGCACCTAAAATTAGCCGATTTTTGCTCTGTGCTCTTTTAATCTATGCTGGCTTCACCTTCTGTGGATGGCTGGTGCTTGGACCGTACCACATTAAGTTTCGTTCGCTTTCTACCACCTCCGAGTGTCTGTTCGCTCTTATCAACGGTGACGATATGTTTGCAACCTTCTCGATCATGTCGGAAAAATCATTGATGCTGTGGTGGTTTTGCCGAATCTATCTGTACTCCTTTACCAGCCTCTATATATATGTGGTATTATCTTTGTTCATATCCGTCATTATGGACGCGTACGATACGATCAAGAAGTATTACAAGGATGGTTTCCCGCAGTCCGATCTTCGACTGTTTGTTGGACCGATCAGTCCTAATGACTTCTCTAGCGGTGTTTTCCGGGAGCACGAAGAATTCGATCTGGAGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACTAACGGCCCAACTGGGCTACACATCA ]
[+] EMBL BM592720 [ ccgACAAGGATGGTTTCCCACAGTCCGATCTTCGACTGTTTGTTGGACCGATCAGTCCTAATGACTTCTCTAGC GTGTTTTCCGGGAGCACGAAGAATTCGATCTGGAGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACCAACGGCCCAACG GGCTACACATCA ]
consensusID : consensus_9610#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 848 fasta sequence
[CCGCGGACGCGTGGGCTGGTGATCAAGAAGAAAGTAGTGTATCCAGAGACAGAGGTATTAGCCGAGCGCAAAACGTACAATTCGATGATACGATGAGACCCATACGCCCTTACGTTTCGAGCCAGCGAACCAGAAGCAACAGTGACCGGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAAC-GGGAGCCA-GGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAAAGGCGGAATTGAAATTTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATA]
[+] EMBL BM650217 [CCGCGGACGCGTGGGCTGGTGATCAAGAAGAAAGTAGTGTATCCAGAGACAGAGGTATTAGCCGAGCGCAAAACGTACAATTCGATGATACGATGAGACCCATACGCCCTTACGTTTCGAGCCAGCGAACCAGAAGCAACAGTGACATGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACA ]
[+] EMBL BM591771 [ CCGGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGGAGCCA GGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAAAGGCGGAATTGAAATTTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATA]
[+] EMBL BM595795 [ CCGGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAAC GGGAGCCA GGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTT ]
[+] EMBL BM580927 [ CCGGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGATTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTTCAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAAC GGGAGCCA GGCGTACCTGCACGATAAAGATATTCAT ]
[+] EMBL BM577273 [ cCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAAC GGGAGCCA GGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAAAGGCG ]
[+] EMBL BM585955 [ ccGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGATTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTTCAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAAC GGGAGCCAGGGCGTACCTGCACG ]
[+] EMBL BM633096 [ GGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCTTCCTCCGCGGCTGGGATATCACGATGGAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGATGAGTTCTTCAAAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGGAGCCA GGCGTACCTGCACGATAAAGATATTCATATCAAC ]
consensusID : consensus_9610#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 712 fasta sequence
[CCGAGAAAAGCTGTATCGATTGGTAAAAATGAAACCAATTCAAATCAACGCACAACTTTTATAAGAGTTCTAAAGTTCCTATGGCTCGAAAAATTCGTTTGCGTTGGTGTACATAGAAAACGGGATAGAACAGTGAATCACACAAGAACCTGCCGTTGACAGTATCATCACAATTGTTCTTGTTTACTTTTCATTCCAACCTAACTGATAAGCGAGAACAAAAAAAAGAAGCTGGCTACGCGTTAATCTATACTGCTGCAATGAGTAGTGTTTACTCATCCTCCACTATCTCGACTGGTGATCAAGAAGAAAGTAGTGTATCCAGAGACAGAGGTATTAGCCGAGCGCAAAACGTACAATTCGATGATACGATGAGACCCATACGCCCTTACGTTTCGAGCCAGCGAACCAGAAGCAACAGTGACATGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGGAGGGGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCT]
[+] EMBL BM594235 [CCGAGAAAAGCTGTATCGATTGGTAAAAATGAAACCAATTCAAATCAACGCACAACTTTTATAAGAGTTCTAAAGTTCCTATGGCTCGAAAAATTCGTTTGCGTTGGTGTACATAGAAAACGGGATAGAACAGTGAATCACACAAGAACCTGCCGTTGACAGTATCATCACAATTGTTCTTGTTTACTTTTCATTCCAACCTAACTGATAAGCGAGAACAAAAAAAAGAAGCTGGCTACGCGTTAATCTATACTGCTGCAATGAGTAGTGTTTACTCATCCTCCACTATCTCGACTGGTGATCAAGAAGAAAGTAGTGTATCCAGAGACAGAGGTATTAGCCGAGCGCAAAACGTACAATTCGATGATACGATGAGACCCATACGCCCTTACGTTTCGAGCCAGCGAACCAGAAGCAACAGTGACATGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTTGGAGGGGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACA ]
[+] EMBL BM640327 [ ccgAATGAAACCAATTCAAATCAACGCACAACTTTTATAAGAGTTCTAAAGTTCCTATGGCTCGAAAAATTCGTTTGCGTTGGTGTACATAGAAAACGGGATAGAACAGTGAATCACACAAGAACCTGCCGTTGACAGTATCATCACAATTGTTCTTGTTTACTTTTCATTCCAACCTAACTGATAAGCGAGAACAAAAAAAAGAAGCTGGCTACGCGTTAATCTATACTGCTGCAATGAGTAGTGTTTACTCATCCTCCACTATCTCGACTGGTGATCAAGAAGAAAGTAGTGTATCCAGAGACAGAGGTATTAGCCGAGCGCAAAACGTACAATTCGATGATACGATGAGACCCATACGCCCTTACGTTTCGAGCCAGCGAACCAGAAGCAACAGTGACATGGCGGTGGAAACAAAGGAACCAACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATGGAAGAACGTTT GAGGCGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAAAATAGTGCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACACATGGGACAACACGGTCACCTTTTCACACCTCT]
consensusID : consensus_9610#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence
[CCGACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAAGATAGTACCATCCTTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGAGCCAGGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAAAGGCGGAATTGAAATTTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATAACAGCTCCCGATTGCTATCGTTTCGATATAATGATTTTCTTCAACAACCAAGACCACGATGGCCAAATGGTACTTCGGCTGGAAGCAGAACCTACACGGTTGGTTTGCCA]
[+] EMBL BM611502 [CCGACGCCAACCTTCCTCAGGCGATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTGTACCGGTACAAAGATAGTACCATCCTTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGAGCCAGGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAAAGGCGGAATTGAAATTTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATAACAGCTCCCGATTGCTATCGTTTCGATATAATGATTTTCTTCAACAACCAAGACCACGATGGCCAAATGGTACTTCGGCTGGAAGCAGAACCTACACGGTTGGTTTGCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9610#0 CCGCCCACGCGTCCGC-GCCAACCTTCCTCAGGCGATCGGGCCCTACTCCT----TCCCA 55
consensus_9610#3 -----------CCGAC-GCCAACCTTCCTCAGGCGATCGGGCCCTACTCCT----TCCCA 44
consensus_9610#1 CCGCGGACGCGTGGGCTGGTGATCAAGAAGAAAGTAGTGTATCCAGAGACAGAGGTATTA 60
consensus_9610#2 ---------------------------CCGAGAAAAGCTGTATCGATTGGT------AAA 27
* * * *
consensus_9610#0 ACCGAGGACAATACG---ATGGCACCCATGCGATTGGGTCTGTACCGGTACAA------- 105
consensus_9610#3 ACCGAGGACAATACG---ATGGCACCCATGCGATTGTGTCTGTACCGGTACAAAGATAGT 101
consensus_9610#1 GCCGAGCGCAAAACGTACAATTCGATGATACGATGAGACCCATACGCCCTTACGTTTCGA 120
consensus_9610#2 AATGAAACCAATTCA-------AATCAACGC-ACAACTTTTATAAGAGTTCTA------- 72
** *** * * * * **
consensus_9610#0 ---------------------GGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATT 144
consensus_9610#3 ACCATCCTTGTACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATT 161
consensus_9610#1 GCCAGC----------GAACCAGAAGCAACAGTGACCGGG--CGGTGGAAACAAAGGAAC 168
consensus_9610#2 -----------------------AAGTTCCTATGGCTCGA--AAAATTCGTTTGCGTTGG 107
* * * * * *
consensus_9610#0 TA-ACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGA 203
consensus_9610#3 TA-ACCCGGAAATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGA 220
consensus_9610#1 CA-ACT-GACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGA 226
consensus_9610#2 TGTACATAGAAAACGGGATAGAACA-GTGAATC-ACACAAGAACCTG-CCGTTGACAGTA 164
** * * * * * ** ** *
consensus_9610#0 GCCAGGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGT---AAAGG 260
consensus_9610#3 GCCAGGCGTACCTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGT---AAAGG 277
consensus_9610#1 GATGGAAGAACGTTTGAGGCGGAAGT-TGCAGTTTTTCTTCATGAATCCAATCGAAAAAT 285
consensus_9610#2 TCATCACAATTGTTCTTGTTTAC--TTTTCATTCCAACCTAACTG-ATAAGC-GAGAACA 220
* * * * ** * * * **
consensus_9610#0 CGGAATTGAAAT----TTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATAACA 316
consensus_9610#3 CGGAATTGAAAT----TTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATAACA 333
consensus_9610#1 GGGAAGCGAAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTATCAA----AATAGT- 340
consensus_9610#2 AAAAAAAGAAGCTGGCTACGCGTTAATCTATACTGCTGCAATGAGTAGTGTTTACTCATC 280
** *** * * * * * *** * *
consensus_9610#0 GCTCCCGAT--TGCTATCGTTTCGATATAATGATTTTC--TTCAACAACCAAGACCACG- 371
consensus_9610#3 GCTCCCGAT--TGCTATCGTTTCGATATAATGATTTTC--TTCAACAACCAAGACCACG- 388
consensus_9610#1 GCTCGTAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACAC 400
consensus_9610#2 CTCCACTATCTCGACTGGTGATCAAGAAGAAAGTAGTGTATCCAGAGACAGAGGTATTAG 340
* * * ** * * ** **
consensus_9610#0 ATGG--CCAAATGGTAC--TTCGGCTGGA-AGCAGAACCTACACGGTTGGTTTGCCACGG 426
consensus_9610#3 ATGG--CCAAATGGTAC--TTCGGCTGGA-AGCAGAACCTACACGGTTGGTTTGCCA--- 440
consensus_9610#1 ATGGGACAACACGGT-C--ACCTTTTCAC-ACCTCTTCCTCCGCGGCTGGGATATCACGA 456
consensus_9610#2 CCGAGCGCAAAACGTACAATTCGATGATACGATGAGACCCATACGCCCT-TACGTTTCGA 399
* * * ** * * ** **
consensus_9610#0 CGATGTAGAGTTTATCAAAAACTCACAAATAGACGACGCACTGCGCAGCTTGTTGAACAT 486
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 TG-----GAGGTCAACAACTATCCACCCGAGACGGGCCCGCTATCGGTGTACATGATCGA 511
consensus_9610#2 GC-----CAGCGAACCAGAAGCA-ACAGTGACATGGCG----GTGGAAACAAAGGAACCA 449
consensus_9610#0 TCTAGTGATCGTGATATGTCTGGTTTCGTTTGCTCTCTGTGCACGTGCCATTTTTCG-TG 545
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 TGAGTTCTTCA--AAACGATTGATTACGCTGCAGCAGGATACGCCAACCTTCCTCAGGCG 569
consensus_9610#2 ACTGACGACGAGGGCATCGTTGAGTCTCCCGTACTGCAGGATGCCCGCATCAACGAGATG 509
consensus_9610#0 CCCAGATTTTGCGGCTGACTACTTGTGATTTTTTCAAGCAAGCCTATGGCAAGGATCTTA 605
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ATCGGGCCCTACTCCTTCCCAACCGAGGACAATACGATGGCACCCATGCGATTGTGTCTG 629
consensus_9610#2 GAAGAACGTTTGGAGGGGGAAGTTGCAGTTTTTCTTCATGAATCCAATCGAAAAATGGGA 569
consensus_9610#0 GCTGCGAAGGCAAATGGGAGTTCGTCAACATGTGGTACATCATG---ATCGTATTCAACG 662
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 TACCGGTACAAGGATGGTACTATCTTTGGATTTAACGAAAGCTACGTATTTAACCCGGAA 689
consensus_9610#2 AGCG---AAGCGACGTTTCCCTTACAAGTTTGTGGTACAAGTTAT-CAAAATAGTGCTCG 625
consensus_9610#0 ACATACTGCTTATTATTGGATCGGCACTTAAGGAGCAGATTGAAAGGAAGCACTTTATTG 722
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ATTGACACACTGTGCGTGGATCTGTATCAGAACGTGACCACAAACGGGAGCCAGGCGTAC 749
consensus_9610#2 TAACGCTGCAACTGTGTCTTTTTGCGCATTCCCGATACACGCACGTGAACTACA-CATGG 684
consensus_9610#0 CAGACGACTGGAACGTTTGCTCCCTGCTTTTGGGTGTGGGCAACTCGTTAGTTTGGTTCG 782
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 CTGCACGATAAAGATATTCATATCAACTTCTCGGCGTTAGTAA------AGGCGGAATTG 803
consensus_9610#2 GACAACACGGTCACCTTTTCACACCTCT-------------------------------- 712
consensus_9610#0 GTGTTTTGCGTTACCTTGGATTCTTCAAAACGTACAATGTCGTCATACTAACACTGAAGA 842
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 AAATTTGCCATCAAAACTGTTAACTTCAAGGCGGCGGGGCCAATA--------------- 848
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 AGGCTGCACCTAAAATTAGCCGATTTTTGCTCTGTGCTCTTTTAATCTATGCTGGCTTCA 902
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 CCTTCTGTGGATGGCTGGTGCTTGGACCGTACCACATTAAGTTTCGTTCGCTTTCTACCA 962
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 CCTCCGAGTGTCTGTTCGCTCTTATCAACGGTGACGATATGTTTGCAACCTTCTCGATCA 1022
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 TGTCGGAAAAATCATTGATGCTGTGGTGGTTTTGCCGAATCTATCTGTACTCCTTTACCA 1082
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 GCCTCTATATATATGTGGTATTATCTTTGTTCATATCCGTCATTATGGACGCGTACGATA 1142
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 CGATCAAGAAGTATTACAAGGATGGTTTCCCGCAGTCCGATCTTCGACTGTTTGTTGGAC 1202
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 CGATCAGTCCTAATGACTTCTCTAGCGGTGTTTTCCGGGAGCACGAAGAATTCGATCTGG 1262
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 AGAACATGTCGTTTTTCGATGTGGTAAAACGCATATTTTGTTTTTCCACCAGGACTAACG 1322
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 GCCCAACTGGCTACACATCATTATTACCAAAGGCTTCTTCTTCAAGCTATGTCAACAATT 1382
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 AGCCAATTTCAAATCTCTTCAGTATCGTTGTTCATTAATTTGTTATGAAGTATGCAATAA 1442
consensus_9610#3 ------------------------------------------------------------
consensus_9610#1 ------------------------------------------------------------
consensus_9610#2 ------------------------------------------------------------
consensus_9610#0 ATTTTAAAAAGCCATAAAAAATACACCA 1470
consensus_9610#3 ----------------------------
consensus_9610#1 ----------------------------
consensus_9610#2 ----------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||